RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
GYPC-203ENST00000409836 PEAK1Q9H792 1746 aa19.36■□□□□ 0.69
GYPC-203ENST00000409836 BRWD3Q6RI45 1802 aa19.35■□□□□ 0.69
GYPC-203ENST00000409836 SPATA31A5Q5VU36 1347 aa19.35■□□□□ 0.69
GYPC-203ENST00000409836 SPATA31A7Q8IWB4 1347 aa19.35■□□□□ 0.69
GYPC-203ENST00000409836 PARP4Q9UKK3 1724 aaKnown RBP19.35■□□□□ 0.69
GYPC-203ENST00000409836 CHRNA2Q15822 529 aa19.35■□□□□ 0.69
GYPC-203ENST00000409836 COG3Q96JB2 828 aa19.35■□□□□ 0.69
GYPC-203ENST00000409836 ONECUT3O60422 494 aaPredicted RBP19.34■□□□□ 0.69
GYPC-203ENST00000409836 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
GYPC-203ENST00000409836 CRB1P82279 1406 aa19.34■□□□□ 0.69
GYPC-203ENST00000409836 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
GYPC-203ENST00000409836 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
GYPC-203ENST00000409836 SPATA31A1Q5TZJ5 1347 aa19.32■□□□□ 0.68
GYPC-203ENST00000409836 PANK3Q9H999 370 aa19.32■□□□□ 0.68
GYPC-203ENST00000409836 EP400Q96L91 3159 aa19.31■□□□□ 0.68
GYPC-203ENST00000409836 MAP2P11137 1827 aaKnown RBP19.3■□□□□ 0.68
GYPC-203ENST00000409836 WDR17Q8IZU2 1322 aa19.3■□□□□ 0.68
GYPC-203ENST00000409836 GGNBP2Q9H3C7 697 aa19.3■□□□□ 0.68
GYPC-203ENST00000409836 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
GYPC-203ENST00000409836 ERBB3P21860 1342 aa19.29■□□□□ 0.68
GYPC-203ENST00000409836 MAP3K19Q56UN5 1328 aa19.29■□□□□ 0.68
GYPC-203ENST00000409836 PER1O15534 1290 aaPredicted RBP19.29■□□□□ 0.68
GYPC-203ENST00000409836 AXIN2Q9Y2T1 843 aa19.29■□□□□ 0.68
GYPC-203ENST00000409836 POLR3GLQ9BT43 218 aa19.28■□□□□ 0.68
GYPC-203ENST00000409836 DISP2A7MBM2 1401 aa19.27■□□□□ 0.68
GYPC-203ENST00000409836 SOCS7O14512 581 aa19.27■□□□□ 0.68
GYPC-203ENST00000409836 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
GYPC-203ENST00000409836 BARGINQ6ZT62 677 aa19.27■□□□□ 0.68
GYPC-203ENST00000409836 IP6K1Q92551 441 aa19.26■□□□□ 0.67
GYPC-203ENST00000409836 THRAP3Q9Y2W1 955 aaKnown RBP19.26■□□□□ 0.67
GYPC-203ENST00000409836 FLT4P35916 1363 aa19.26■□□□□ 0.67
GYPC-203ENST00000409836 NCAPD2Q15021 1401 aa19.25■□□□□ 0.67
GYPC-203ENST00000409836 LARP1Q6PKG0 1096 aaKnown RBP19.25■□□□□ 0.67
GYPC-203ENST00000409836 INSRP06213 1382 aa19.24■□□□□ 0.67
GYPC-203ENST00000409836 SOX12O15370 315 aa19.24■□□□□ 0.67
GYPC-203ENST00000409836 RGPD2P0DJD1 1756 aa19.24■□□□□ 0.67
GYPC-203ENST00000409836 HOXC9P31274 260 aa19.23■□□□□ 0.67
GYPC-203ENST00000409836 STRN4Q9NRL3 753 aa19.23■□□□□ 0.67
GYPC-203ENST00000409836 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
GYPC-203ENST00000409836 TCP11L2Q8N4U5 519 aa19.22■□□□□ 0.67
GYPC-203ENST00000409836 CARD10Q9BWT7 1032 aa19.22■□□□□ 0.67
GYPC-203ENST00000409836 EVA1CP58658 441 aa19.21■□□□□ 0.67
GYPC-203ENST00000409836 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
GYPC-203ENST00000409836 RRS1Q15050 365 aaKnown RBP19.19■□□□□ 0.66
GYPC-203ENST00000409836 FAM98CQ17RN3 349 aaKnown RBP19.19■□□□□ 0.66
GYPC-203ENST00000409836 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
GYPC-203ENST00000409836 RGPD1P0DJD0 1748 aa19.19■□□□□ 0.66
GYPC-203ENST00000409836 TNS2Q63HR2 1409 aa19.18■□□□□ 0.66
GYPC-203ENST00000409836 SHANK3Q9BYB0 1731 aa19.18■□□□□ 0.66
GYPC-203ENST00000409836 ANKRD24Q8TF21 1146 aa19.18■□□□□ 0.66
GYPC-203ENST00000409836 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
GYPC-203ENST00000409836 FBLN1P23142 703 aa19.17■□□□□ 0.66
GYPC-203ENST00000409836 CDCA7Q9BWT1 371 aaPredicted RBP19.17■□□□□ 0.66
GYPC-203ENST00000409836 PLEKHG2Q9H7P9 1386 aa19.17■□□□□ 0.66
GYPC-203ENST00000409836 BCL9O00512 1426 aa19.17■□□□□ 0.66
GYPC-203ENST00000409836 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
GYPC-203ENST00000409836 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
GYPC-203ENST00000409836 EMILIN1Q9Y6C2 1016 aa19.16■□□□□ 0.66
GYPC-203ENST00000409836 PKD1L3Q7Z443 1732 aa19.15■□□□□ 0.66
GYPC-203ENST00000409836 TNS1Q9HBL0 1735 aaKnown RBP19.15■□□□□ 0.66
GYPC-203ENST00000409836 AMPHP49418 695 aa19.15■□□□□ 0.66
GYPC-203ENST00000409836 SBF2Q86WG5 1849 aa19.14■□□□□ 0.65
GYPC-203ENST00000409836 KRT27Q7Z3Y8 459 aa19.12■□□□□ 0.65
GYPC-203ENST00000409836 COL3A1P02461 1466 aaPredicted RBP19.11■□□□□ 0.65
GYPC-203ENST00000409836 OVOS2A0A0G2JMS6 1433 aa19.11■□□□□ 0.65
GYPC-203ENST00000409836 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
GYPC-203ENST00000409836 HSP90AB2PQ58FF8 381 aa19.11■□□□□ 0.65
GYPC-203ENST00000409836 MORC1Q86VD1 984 aa19.11■□□□□ 0.65
GYPC-203ENST00000409836 MEGF6O75095 1541 aa19.1■□□□□ 0.65
GYPC-203ENST00000409836 USP35Q9P2H5 1018 aa19.1■□□□□ 0.65
GYPC-203ENST00000409836 RGPD3A6NKT7 1758 aaPredicted RBP19.1■□□□□ 0.65
GYPC-203ENST00000409836 RGPD4Q7Z3J3 1758 aa19.1■□□□□ 0.65
GYPC-203ENST00000409836 UPF1Q92900 1129 aaKnown RBP eCLIP19.09■□□□□ 0.652e-12■■■□□ 16.5
GYPC-203ENST00000409836 NLRP2Q9NX02 1062 aa19.08■□□□□ 0.64
GYPC-203ENST00000409836 PARD3Q8TEW0 1356 aa19.07■□□□□ 0.64
GYPC-203ENST00000409836 NHSQ6T4R5 1651 aa19.07■□□□□ 0.64
GYPC-203ENST00000409836 IL2RBP14784 551 aa19.06■□□□□ 0.64
GYPC-203ENST00000409836 IGSF1Q8N6C5 1336 aa19.05■□□□□ 0.64
GYPC-203ENST00000409836 NBPF6Q5VWK0 638 aa19.05■□□□□ 0.64
GYPC-203ENST00000409836 CCDC125Q86Z20 511 aa19.05■□□□□ 0.64
GYPC-203ENST00000409836 NBPF4Q96M43 638 aa19.05■□□□□ 0.64
GYPC-203ENST00000409836 KDRP35968 1356 aa19.05■□□□□ 0.64
GYPC-203ENST00000409836 A0A0G2JS52 829 aa19.04■□□□□ 0.64
GYPC-203ENST00000409836 TNNT2P45379 298 aaPredicted RBP19.04■□□□□ 0.64
GYPC-203ENST00000409836 MYT1Q01538 1121 aa19.04■□□□□ 0.64
GYPC-203ENST00000409836 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
GYPC-203ENST00000409836 DDB1Q16531 1140 aa19.04■□□□□ 0.64
GYPC-203ENST00000409836 CC2D1BQ5T0F9 858 aaKnown RBP19.04■□□□□ 0.64
GYPC-203ENST00000409836 LTV1Q96GA3 475 aaPredicted RBP19.03■□□□□ 0.64
GYPC-203ENST00000409836 FAM196AQ6ZSG2 479 aa19.02■□□□□ 0.64
GYPC-203ENST00000409836 RREB1Q92766 1687 aa19.01■□□□□ 0.63
GYPC-203ENST00000409836 PPM1GO15355 546 aaPredicted RBP19■□□□□ 0.63
GYPC-203ENST00000409836 PDE3BQ13370 1112 aa19■□□□□ 0.63
GYPC-203ENST00000409836 EYA1Q99502 592 aa19■□□□□ 0.63
GYPC-203ENST00000409836 DOT1LQ8TEK3 1739 aa19■□□□□ 0.63
GYPC-203ENST00000409836 MTHFSP49914 203 aa18.99■□□□□ 0.63
GYPC-203ENST00000409836 MARCH10Q8NA82 808 aaPredicted RBP18.99■□□□□ 0.63
GYPC-203ENST00000409836 EXOC5O00471 708 aa18.98■□□□□ 0.63
GYPC-203ENST00000409836 IL13P35225 146 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms