RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.54■□□□□ 0.56
IFITM1-202ENST00000408968 SEPT12Q8IYM1 358 aa18.54■□□□□ 0.56
IFITM1-202ENST00000408968 A0A0G2JS52 829 aa18.53■□□□□ 0.56
IFITM1-202ENST00000408968 RGPD1P0DJD0 1748 aa18.53■□□□□ 0.56
IFITM1-202ENST00000408968 MYT1Q01538 1121 aa18.53■□□□□ 0.56
IFITM1-202ENST00000408968 CCDC125Q86Z20 511 aa18.53■□□□□ 0.56
IFITM1-202ENST00000408968 STRN4Q9NRL3 753 aa18.53■□□□□ 0.56
IFITM1-202ENST00000408968 THRAP3Q9Y2W1 955 aaKnown RBP18.53■□□□□ 0.56
IFITM1-202ENST00000408968 EP400Q96L91 3159 aa18.52■□□□□ 0.55
IFITM1-202ENST00000408968 FAM98CQ17RN3 349 aaKnown RBP18.51■□□□□ 0.55
IFITM1-202ENST00000408968 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
IFITM1-202ENST00000408968 ARHGEF25Q86VW2 580 aa18.51■□□□□ 0.55
IFITM1-202ENST00000408968 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
IFITM1-202ENST00000408968 NME9Q86XW9 330 aa18.5■□□□□ 0.55
IFITM1-202ENST00000408968 BLMP54132 1417 aaPredicted RBP18.49■□□□□ 0.55
IFITM1-202ENST00000408968 ANKRD26Q9UPS8 1709 aa18.49■□□□□ 0.55
IFITM1-202ENST00000408968 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
IFITM1-202ENST00000408968 TCP11L2Q8N4U5 519 aa18.49■□□□□ 0.55
IFITM1-202ENST00000408968 COG3Q96JB2 828 aa18.49■□□□□ 0.55
IFITM1-202ENST00000408968 WDR17Q8IZU2 1322 aa18.49■□□□□ 0.55
IFITM1-202ENST00000408968 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
IFITM1-202ENST00000408968 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
IFITM1-202ENST00000408968 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
IFITM1-202ENST00000408968 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
IFITM1-202ENST00000408968 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
IFITM1-202ENST00000408968 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
IFITM1-202ENST00000408968 SOX12O15370 315 aa18.45■□□□□ 0.54
IFITM1-202ENST00000408968 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
IFITM1-202ENST00000408968 NSD3Q9BZ95 1437 aa18.44■□□□□ 0.54
IFITM1-202ENST00000408968 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
IFITM1-202ENST00000408968 TOM1L2Q6ZVM7 507 aa18.44■□□□□ 0.54
IFITM1-202ENST00000408968 TNS1Q9HBL0 1735 aaKnown RBP18.43■□□□□ 0.54
IFITM1-202ENST00000408968 USP35Q9P2H5 1018 aa18.43■□□□□ 0.54
IFITM1-202ENST00000408968 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
IFITM1-202ENST00000408968 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
IFITM1-202ENST00000408968 ERBB3P21860 1342 aa18.42■□□□□ 0.54
IFITM1-202ENST00000408968 CARD10Q9BWT7 1032 aa18.41■□□□□ 0.54
IFITM1-202ENST00000408968 ZRANB1Q9UGI0 708 aa18.41■□□□□ 0.54
IFITM1-202ENST00000408968 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
IFITM1-202ENST00000408968 PDE3BQ13370 1112 aa18.4■□□□□ 0.54
IFITM1-202ENST00000408968 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
IFITM1-202ENST00000408968 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
IFITM1-202ENST00000408968 NSD2O96028 1365 aa18.39■□□□□ 0.53
IFITM1-202ENST00000408968 OVOS2A0A0G2JMS6 1433 aa18.39■□□□□ 0.53
IFITM1-202ENST00000408968 PEAK1Q9H792 1746 aa18.38■□□□□ 0.53
IFITM1-202ENST00000408968 FYB1O15117 783 aa18.38■□□□□ 0.53
IFITM1-202ENST00000408968 FAM196AQ6ZSG2 479 aa18.38■□□□□ 0.53
IFITM1-202ENST00000408968 DISP2A7MBM2 1401 aa18.38■□□□□ 0.53
IFITM1-202ENST00000408968 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
IFITM1-202ENST00000408968 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
IFITM1-202ENST00000408968 IP6K1Q92551 441 aa18.37■□□□□ 0.53
IFITM1-202ENST00000408968 TNS2Q63HR2 1409 aa18.37■□□□□ 0.53
IFITM1-202ENST00000408968 SBF2Q86WG5 1849 aa18.36■□□□□ 0.53
IFITM1-202ENST00000408968 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
IFITM1-202ENST00000408968 FLT4P35916 1363 aa18.35■□□□□ 0.53
IFITM1-202ENST00000408968 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
IFITM1-202ENST00000408968 BAG6P46379 1132 aa18.35■□□□□ 0.53
IFITM1-202ENST00000408968 AMPHP49418 695 aa18.35■□□□□ 0.53
IFITM1-202ENST00000408968 DDB1Q16531 1140 aa18.35■□□□□ 0.53
IFITM1-202ENST00000408968 ANKRD24Q8TF21 1146 aa18.35■□□□□ 0.53
IFITM1-202ENST00000408968 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
IFITM1-202ENST00000408968 MAP2P11137 1827 aaKnown RBP18.35■□□□□ 0.53
IFITM1-202ENST00000408968 BCL9O00512 1426 aa18.33■□□□□ 0.53
IFITM1-202ENST00000408968 PARD3Q8TEW0 1356 aa18.33■□□□□ 0.53
IFITM1-202ENST00000408968 CARD14Q9BXL6 1004 aa18.33■□□□□ 0.52
IFITM1-202ENST00000408968 HOXC9P31274 260 aa18.32■□□□□ 0.52
IFITM1-202ENST00000408968 NLRP2Q9NX02 1062 aa18.32■□□□□ 0.52
IFITM1-202ENST00000408968 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
IFITM1-202ENST00000408968 INSRP06213 1382 aa18.3■□□□□ 0.52
IFITM1-202ENST00000408968 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
IFITM1-202ENST00000408968 RREB1Q92766 1687 aa18.3■□□□□ 0.52
IFITM1-202ENST00000408968 NHSQ6T4R5 1651 aa18.29■□□□□ 0.52
IFITM1-202ENST00000408968 IL2RBP14784 551 aa18.29■□□□□ 0.52
IFITM1-202ENST00000408968 EXOC5O00471 708 aa18.28■□□□□ 0.52
IFITM1-202ENST00000408968 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
IFITM1-202ENST00000408968 RRS1Q15050 365 aaKnown RBP18.27■□□□□ 0.52
IFITM1-202ENST00000408968 PANK3Q9H999 370 aa18.27■□□□□ 0.52
IFITM1-202ENST00000408968 KNSTRNQ9Y448 316 aa18.26■□□□□ 0.51
IFITM1-202ENST00000408968 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
IFITM1-202ENST00000408968 SHANK3Q9BYB0 1731 aa18.24■□□□□ 0.51
IFITM1-202ENST00000408968 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
IFITM1-202ENST00000408968 NUP188Q5SRE5 1749 aa18.23■□□□□ 0.51
IFITM1-202ENST00000408968 TRIM37O94972 964 aa18.23■□□□□ 0.51
IFITM1-202ENST00000408968 LTV1Q96GA3 475 aaPredicted RBP18.23■□□□□ 0.51
IFITM1-202ENST00000408968 PKD1L3Q7Z443 1732 aa18.23■□□□□ 0.51
IFITM1-202ENST00000408968 DEFB132Q7Z7B7 95 aa18.22■□□□□ 0.51
IFITM1-202ENST00000408968 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
IFITM1-202ENST00000408968 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
IFITM1-202ENST00000408968 APBA3O96018 575 aa18.2■□□□□ 0.5
IFITM1-202ENST00000408968 MARCH10Q8NA82 808 aaPredicted RBP18.2■□□□□ 0.5
IFITM1-202ENST00000408968 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
IFITM1-202ENST00000408968 MEGF6O75095 1541 aa18.19■□□□□ 0.5
IFITM1-202ENST00000408968 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
IFITM1-202ENST00000408968 BCL11BQ9C0K0 894 aaPredicted RBP18.19■□□□□ 0.5
IFITM1-202ENST00000408968 EMILIN1Q9Y6C2 1016 aa18.19■□□□□ 0.5
IFITM1-202ENST00000408968 BTAF1O14981 1849 aa18.19■□□□□ 0.5
IFITM1-202ENST00000408968 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
IFITM1-202ENST00000408968 FBLN1P23142 703 aa18.18■□□□□ 0.5
IFITM1-202ENST00000408968 HSP90AB2PQ58FF8 381 aa18.18■□□□□ 0.5
IFITM1-202ENST00000408968 KAT6BQ8WYB5 2073 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms