RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 STRN4Q9NRL3 753 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 HMGN5P82970 282 aaKnown RBP14.24□□□□□ -0.13
SMCR8-201ENST00000406438 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 SOGA3Q5TF21 947 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 TNMDQ9H2S6 317 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 GGNBP2Q9H3C7 697 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 MTHFSP49914 203 aa14.24□□□□□ -0.13
SMCR8-201ENST00000406438 FIBPO43427 364 aa14.23□□□□□ -0.13
SMCR8-201ENST00000406438 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
SMCR8-201ENST00000406438 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
SMCR8-201ENST00000406438 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
SMCR8-201ENST00000406438 TATP17735 454 aaPredicted RBP14.23□□□□□ -0.13
SMCR8-201ENST00000406438 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
SMCR8-201ENST00000406438 CABP4P57796 275 aa14.23□□□□□ -0.13
SMCR8-201ENST00000406438 GCC1Q96CN9 775 aa14.23□□□□□ -0.13
SMCR8-201ENST00000406438 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
SMCR8-201ENST00000406438 NEBLO76041 1014 aa14.23□□□□□ -0.13
SMCR8-201ENST00000406438 NFKBIBQ15653 356 aa14.23□□□□□ -0.13
SMCR8-201ENST00000406438 BMP2KQ9NSY1 1161 aaPredicted RBP14.23□□□□□ -0.13
SMCR8-201ENST00000406438 CENPHQ9H3R5 247 aa14.22□□□□□ -0.13
SMCR8-201ENST00000406438 NOL7Q9UMY1 257 aaKnown RBP14.22□□□□□ -0.13
SMCR8-201ENST00000406438 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
SMCR8-201ENST00000406438 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
SMCR8-201ENST00000406438 CBFA2T2O43439 604 aa14.22□□□□□ -0.13
SMCR8-201ENST00000406438 EIF3JO75822 258 aaKnown RBP14.22□□□□□ -0.13
SMCR8-201ENST00000406438 PRPF40AO75400 957 aaKnown RBP14.22□□□□□ -0.13
SMCR8-201ENST00000406438 HECW1Q76N89 1606 aa14.22□□□□□ -0.13
SMCR8-201ENST00000406438 CFAP45Q9UL16 551 aa14.21□□□□□ -0.13
SMCR8-201ENST00000406438 SRCIN1Q9C0H9 1055 aa14.21□□□□□ -0.13
SMCR8-201ENST00000406438 SEPT11Q9NVA2 429 aaKnown RBP14.21□□□□□ -0.13
SMCR8-201ENST00000406438 STK11IPQ8N1F8 1099 aa14.21□□□□□ -0.14
SMCR8-201ENST00000406438 KRT85P78386 507 aa14.2□□□□□ -0.14
SMCR8-201ENST00000406438 FGD6Q6ZV73 1430 aa14.2□□□□□ -0.14
SMCR8-201ENST00000406438 FKBP4Q02790 459 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMCR8-201ENST00000406438 WDR33Q9C0J8 1336 aaKnown RBP14.2□□□□□ -0.14
SMCR8-201ENST00000406438 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
SMCR8-201ENST00000406438 NUP133Q8WUM0 1156 aa14.2□□□□□ -0.14
SMCR8-201ENST00000406438 ZNF76P36508 570 aa14.19□□□□□ -0.14
SMCR8-201ENST00000406438 ZNF397Q8NF99 534 aaPredicted RBP14.19□□□□□ -0.14
SMCR8-201ENST00000406438 TWISTNBQ3B726 338 aaPredicted RBP14.19□□□□□ -0.14
SMCR8-201ENST00000406438 STK3Q13188 491 aa14.19□□□□□ -0.14
SMCR8-201ENST00000406438 TAX1BP1Q86VP1 789 aa14.19□□□□□ -0.14
SMCR8-201ENST00000406438 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
SMCR8-201ENST00000406438 NOB1Q9ULX3 412 aaKnown RBP14.19□□□□□ -0.14
SMCR8-201ENST00000406438 ERLIN1O75477 346 aa14.19□□□□□ -0.14
SMCR8-201ENST00000406438 HMGB2P26583 209 aaKnown RBP14.19□□□□□ -0.14
SMCR8-201ENST00000406438 CEP57L1Q8IYX8 460 aa14.19□□□□□ -0.14
SMCR8-201ENST00000406438 SPG7Q9UQ90 795 aa14.19□□□□□ -0.14
SMCR8-201ENST00000406438 TDO2P48775 406 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 MYL6BP14649 208 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 SIL1Q9H173 461 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 POTEJP0CG39 1038 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
SMCR8-201ENST00000406438 TOM1L2Q6ZVM7 507 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 PNISRQ8TF01 805 aaKnown RBP14.18□□□□□ -0.14
SMCR8-201ENST00000406438 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 UBAC1Q9BSL1 405 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
SMCR8-201ENST00000406438 LRRFIP2Q9Y608 721 aaKnown RBP14.18□□□□□ -0.14
SMCR8-201ENST00000406438 JAKMIP3Q5VZ66 844 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 TMEM132EQ6IEE7 984 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 KIAA1328Q86T90 577 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 PPP1R12BO60237 982 aaPredicted RBP14.17□□□□□ -0.14
SMCR8-201ENST00000406438 PRKAR2BP31323 418 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 ZNF287Q9HBT7 754 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
SMCR8-201ENST00000406438 CEP131Q9UPN4 1083 aa14.16□□□□□ -0.14
SMCR8-201ENST00000406438 LARP1BQ659C4 914 aaKnown RBP14.16□□□□□ -0.14
SMCR8-201ENST00000406438 FAM177A1Q8N128 213 aaPredicted RBP14.16□□□□□ -0.14
SMCR8-201ENST00000406438 WASF1Q92558 559 aa14.16□□□□□ -0.14
SMCR8-201ENST00000406438 CTNNA3Q9UI47 895 aa14.16□□□□□ -0.14
SMCR8-201ENST00000406438 SYNJ2O15056 1496 aa14.16□□□□□ -0.14
SMCR8-201ENST00000406438 PDIA4P13667 645 aaKnown RBP14.16□□□□□ -0.14
SMCR8-201ENST00000406438 CCDC91Q7Z6B0 441 aa14.16□□□□□ -0.14
SMCR8-201ENST00000406438 TNIP1Q15025 636 aa14.15□□□□□ -0.14
SMCR8-201ENST00000406438 ADAMTS8Q9UP79 889 aa14.15□□□□□ -0.14
SMCR8-201ENST00000406438 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
SMCR8-201ENST00000406438 TCP11L2Q8N4U5 519 aa14.15□□□□□ -0.14
SMCR8-201ENST00000406438 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
SMCR8-201ENST00000406438 CCDC112Q8NEF3 446 aa14.15□□□□□ -0.14
SMCR8-201ENST00000406438 PKNOX2Q96KN3 472 aa14.15□□□□□ -0.14
SMCR8-201ENST00000406438 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
SMCR8-201ENST00000406438 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMCR8-201ENST00000406438 PPM1FP49593 454 aaPredicted RBP14.14□□□□□ -0.15
SMCR8-201ENST00000406438 SSR1P43307 286 aaKnown RBP14.14□□□□□ -0.15
SMCR8-201ENST00000406438 PODXL2Q9NZ53 605 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 BTBD11A6QL63 1104 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 ANAPC15P60006 121 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 KRT32Q14532 448 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 TXNDC2Q86VQ3 553 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 BLOC1S2Q6QNY1 142 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 LRP2BPQ9P2M1 347 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 CETN2P41208 172 aa14.14□□□□□ -0.15
SMCR8-201ENST00000406438 SMTNL1A8MU46 457 aa14.13□□□□□ -0.15
SMCR8-201ENST00000406438 MAP4K4O95819 1239 aaPredicted RBP14.13□□□□□ -0.15
SMCR8-201ENST00000406438 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
SMCR8-201ENST00000406438 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms