RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 FCHSD2O94868 740 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 TXLNAP40222 546 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 AFAP1Q8N556 730 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 PRAM1Q96QH2 718 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 TRIM34Q9BYJ4 488 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 KIF14Q15058 1648 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 OFD1O75665 1012 aa15.84■□□□□ 0.13
SNED1-205ENST00000405547 RPAP2Q8IXW5 612 aaPredicted RBP15.84■□□□□ 0.13
SNED1-205ENST00000405547 HDGFL1Q5TGJ6 251 aa15.84■□□□□ 0.13
SNED1-205ENST00000405547 ZSCAN31Q96LW9 406 aaPredicted RBP15.84■□□□□ 0.13
SNED1-205ENST00000405547 H0YHG0 523 aa15.84■□□□□ 0.13
SNED1-205ENST00000405547 ATAD2Q6PL18 1390 aa15.83■□□□□ 0.13
SNED1-205ENST00000405547 ME1P48163 572 aa15.83■□□□□ 0.13
SNED1-205ENST00000405547 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.13
SNED1-205ENST00000405547 DACH1Q9UI36 760 aa15.83■□□□□ 0.12
SNED1-205ENST00000405547 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
SNED1-205ENST00000405547 PRG4Q92954 1404 aaPredicted RBP15.83■□□□□ 0.12
SNED1-205ENST00000405547 SERPINC1P01008 464 aa15.83■□□□□ 0.12
SNED1-205ENST00000405547 PDCL2Q8N4E4 241 aa15.83■□□□□ 0.12
SNED1-205ENST00000405547 LRPPRCP42704 1394 aaKnown RBP15.83■□□□□ 0.12
SNED1-205ENST00000405547 TMEM57Q8N5G2 664 aa15.82■□□□□ 0.12
SNED1-205ENST00000405547 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
SNED1-205ENST00000405547 BLOC1S2Q6QNY1 142 aa15.82■□□□□ 0.12
SNED1-205ENST00000405547 CDK13Q14004 1512 aaKnown RBP15.82■□□□□ 0.12
SNED1-205ENST00000405547 PLEKHO1Q53GL0 409 aaPredicted RBP15.82■□□□□ 0.12
SNED1-205ENST00000405547 SULT6B1Q6IMI4 303 aa15.82■□□□□ 0.12
SNED1-205ENST00000405547 NUP62CLQ9H1M0 184 aa15.82■□□□□ 0.12
SNED1-205ENST00000405547 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
SNED1-205ENST00000405547 ABCC11Q96J66 1382 aa15.82■□□□□ 0.12
SNED1-205ENST00000405547 CEBPZQ03701 1054 aaKnown RBP15.81■□□□□ 0.12
SNED1-205ENST00000405547 MAGEC2Q9UBF1 373 aaPredicted RBP15.81■□□□□ 0.12
SNED1-205ENST00000405547 PLEKHH1Q9ULM0 1364 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 KRT32Q14532 448 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 CBFA2T2O43439 604 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 TAF3Q5VWG9 929 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 CDK19Q9BWU1 502 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 ALDH1L2Q3SY69 923 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 BIVM-ERCC5R4GMW8 1640 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 RRP12Q5JTH9 1297 aaKnown RBP15.81■□□□□ 0.12
SNED1-205ENST00000405547 ABTB2Q8N961 1025 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 SPATA32Q96LK8 384 aa15.81■□□□□ 0.12
SNED1-205ENST00000405547 PATL2C9JE40 543 aaKnown RBP15.81■□□□□ 0.12
SNED1-205ENST00000405547 RPGRIP1LQ68CZ1 1315 aa15.8■□□□□ 0.12
SNED1-205ENST00000405547 DNAJC2Q99543 621 aaKnown RBP15.8■□□□□ 0.12
SNED1-205ENST00000405547 PPP6R1Q9UPN7 881 aa15.8■□□□□ 0.12
SNED1-205ENST00000405547 RARSP54136 660 aaKnown RBP15.8■□□□□ 0.12
SNED1-205ENST00000405547 ZNHIT6Q9NWK9 470 aaKnown RBP15.8■□□□□ 0.12
SNED1-205ENST00000405547 CAMSAP2Q08AD1 1489 aa15.8■□□□□ 0.12
SNED1-205ENST00000405547 SYCE3A1L190 88 aa15.8■□□□□ 0.12
SNED1-205ENST00000405547 EIF3JO75822 258 aaKnown RBP15.8■□□□□ 0.12
SNED1-205ENST00000405547 RDXP35241 583 aaKnown RBP15.8■□□□□ 0.12
SNED1-205ENST00000405547 TTLL5Q6EMB2 1281 aa15.8■□□□□ 0.12
SNED1-205ENST00000405547 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
SNED1-205ENST00000405547 GPRASP1Q5JY77 1395 aa15.79■□□□□ 0.12
SNED1-205ENST00000405547 KIF2AO00139 706 aaPredicted RBP15.79■□□□□ 0.12
SNED1-205ENST00000405547 MAP3K11Q16584 847 aa15.79■□□□□ 0.12
SNED1-205ENST00000405547 PPFIBP1Q86W92 1011 aa15.79■□□□□ 0.12
SNED1-205ENST00000405547 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
SNED1-205ENST00000405547 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNED1-205ENST00000405547 CT47A1Q5JQC4 288 aaPredicted RBP15.79■□□□□ 0.12
SNED1-205ENST00000405547 LUC7LQ9NQ29 371 aaKnown RBP15.79■□□□□ 0.12
SNED1-205ENST00000405547 NFE2L2Q16236 605 aa15.79■□□□□ 0.12
SNED1-205ENST00000405547 CEP57L1Q8IYX8 460 aa15.78■□□□□ 0.12
SNED1-205ENST00000405547 ERLIN1O75477 346 aa15.78■□□□□ 0.12
SNED1-205ENST00000405547 CCDC43Q96MW1 224 aaKnown RBP15.78■□□□□ 0.12
SNED1-205ENST00000405547 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
SNED1-205ENST00000405547 TRIM22Q8IYM9 498 aa15.78■□□□□ 0.12
SNED1-205ENST00000405547 PDRG1Q9NUG6 133 aa15.78■□□□□ 0.12
SNED1-205ENST00000405547 CABP1Q9NZU7 370 aa15.78■□□□□ 0.12
SNED1-205ENST00000405547 RAD21O60216 631 aa15.77■□□□□ 0.12
SNED1-205ENST00000405547 CCDC191Q8NCU4 936 aa15.77■□□□□ 0.12
SNED1-205ENST00000405547 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.12
SNED1-205ENST00000405547 SLC3A2P08195 630 aaKnown RBP15.77■□□□□ 0.12
SNED1-205ENST00000405547 CCDC158Q5M9N0 1113 aa15.77■□□□□ 0.12
SNED1-205ENST00000405547 TXLNBQ8N3L3 684 aa15.77■□□□□ 0.12
SNED1-205ENST00000405547 IFT140Q96RY7 1462 aa15.77■□□□□ 0.12
SNED1-205ENST00000405547 PRM3Q9NNZ6 103 aa15.77■□□□□ 0.12
SNED1-205ENST00000405547 FAM135AQ9P2D6 1515 aa15.77■□□□□ 0.11
SNED1-205ENST00000405547 STIM1Q13586 685 aa15.77■□□□□ 0.11
SNED1-205ENST00000405547 CCDC183Q5T5S1 534 aa15.77■□□□□ 0.11
SNED1-205ENST00000405547 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.11
SNED1-205ENST00000405547 CDKL5O76039 1030 aa15.77■□□□□ 0.11
SNED1-205ENST00000405547 C20orf194Q5TEA3 1177 aa15.77■□□□□ 0.11
SNED1-205ENST00000405547 OSCARQ8IYS5 282 aa15.77■□□□□ 0.11
SNED1-205ENST00000405547 TBC1D2Q9BYX2 928 aa15.77■□□□□ 0.11
SNED1-205ENST00000405547 SRGAP3O43295 1099 aa15.76■□□□□ 0.11
SNED1-205ENST00000405547 AXDND1Q5T1B0 1012 aaPredicted RBP15.76■□□□□ 0.11
SNED1-205ENST00000405547 SMTNL1A8MU46 457 aa15.76■□□□□ 0.11
SNED1-205ENST00000405547 ODF2Q5BJF6 829 aa15.76■□□□□ 0.11
SNED1-205ENST00000405547 NLRP2Q9NX02 1062 aa15.76■□□□□ 0.11
SNED1-205ENST00000405547 CFAP65Q6ZU64 1925 aaKnown RBP15.76■□□□□ 0.11
SNED1-205ENST00000405547 NESP48681 1621 aa15.76■□□□□ 0.11
SNED1-205ENST00000405547 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
SNED1-205ENST00000405547 JAKMIP1Q96N16 626 aaKnown RBP15.76■□□□□ 0.11
SNED1-205ENST00000405547 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
SNED1-205ENST00000405547 STK3Q13188 491 aa15.75■□□□□ 0.11
SNED1-205ENST00000405547 CWC27Q6UX04 472 aaKnown RBP15.75■□□□□ 0.11
SNED1-205ENST00000405547 RTEL1-TNFRSF6BF6WH68 1400 aa15.75■□□□□ 0.11
SNED1-205ENST00000405547 RAB11FIP3O75154 756 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms