RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 THRAP3Q9Y2W1 955 aaKnown RBP13.88□□□□□ -0.19
NUP43-204ENST00000403890 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
NUP43-204ENST00000403890 PRR36Q9H6K5 1346 aa13.88□□□□□ -0.19
NUP43-204ENST00000403890 EIF3AQ14152 1382 aaKnown RBP13.87□□□□□ -0.19
NUP43-204ENST00000403890 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
NUP43-204ENST00000403890 BCL11BQ9C0K0 894 aaPredicted RBP13.87□□□□□ -0.19
NUP43-204ENST00000403890 NRKQ7Z2Y5 1582 aa13.86□□□□□ -0.19
NUP43-204ENST00000403890 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
NUP43-204ENST00000403890 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
NUP43-204ENST00000403890 CRYBG1Q9Y4K1 1723 aa13.84□□□□□ -0.19
NUP43-204ENST00000403890 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
NUP43-204ENST00000403890 GIGYF1O75420 1035 aaPredicted RBP13.84□□□□□ -0.19
NUP43-204ENST00000403890 NUTM2GQ5VZR2 741 aa13.84□□□□□ -0.19
NUP43-204ENST00000403890 PROM2Q8N271 834 aa13.83□□□□□ -0.2
NUP43-204ENST00000403890 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.2
NUP43-204ENST00000403890 CHD4Q14839 1912 aa13.83□□□□□ -0.2
NUP43-204ENST00000403890 DLC1Q96QB1 1528 aa13.83□□□□□ -0.2
NUP43-204ENST00000403890 CASZ1Q86V15 1759 aa13.82□□□□□ -0.2
NUP43-204ENST00000403890 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
NUP43-204ENST00000403890 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
NUP43-204ENST00000403890 CEP350Q5VT06 3117 aa13.81□□□□□ -0.2
NUP43-204ENST00000403890 OVOS2A0A0G2JMS6 1433 aa13.81□□□□□ -0.2
NUP43-204ENST00000403890 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
NUP43-204ENST00000403890 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
NUP43-204ENST00000403890 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
NUP43-204ENST00000403890 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
NUP43-204ENST00000403890 MTFR1LQ9H019 292 aa13.81□□□□□ -0.2
NUP43-204ENST00000403890 MYOM1P52179 1685 aa13.81□□□□□ -0.2
NUP43-204ENST00000403890 SLC15A2Q16348 729 aa13.8□□□□□ -0.2
NUP43-204ENST00000403890 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
NUP43-204ENST00000403890 SGIP1Q9BQI5 828 aa13.8□□□□□ -0.2
NUP43-204ENST00000403890 DDB1Q16531 1140 aa13.79□□□□□ -0.2
NUP43-204ENST00000403890 GPR162Q16538 588 aa13.79□□□□□ -0.2
NUP43-204ENST00000403890 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
NUP43-204ENST00000403890 ARXQ96QS3 562 aa13.79□□□□□ -0.2
NUP43-204ENST00000403890 MPHOSPH9Q99550 1183 aa13.79□□□□□ -0.2
NUP43-204ENST00000403890 CPDO75976 1380 aa13.79□□□□□ -0.2
NUP43-204ENST00000403890 RGPD3A6NKT7 1758 aaPredicted RBP13.78□□□□□ -0.2
NUP43-204ENST00000403890 RGPD4Q7Z3J3 1758 aa13.78□□□□□ -0.2
NUP43-204ENST00000403890 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
NUP43-204ENST00000403890 ATP7BP35670 1465 aa13.78□□□□□ -0.2
NUP43-204ENST00000403890 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
NUP43-204ENST00000403890 PHRF1Q9P1Y6 1649 aaKnown RBP13.76□□□□□ -0.21
NUP43-204ENST00000403890 GCP02774 474 aa13.76□□□□□ -0.21
NUP43-204ENST00000403890 PARP4Q9UKK3 1724 aaKnown RBP13.76□□□□□ -0.21
NUP43-204ENST00000403890 CRB1P82279 1406 aa13.75□□□□□ -0.21
NUP43-204ENST00000403890 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
NUP43-204ENST00000403890 PEAK1Q9H792 1746 aa13.75□□□□□ -0.21
NUP43-204ENST00000403890 ACEP12821 1306 aa13.74□□□□□ -0.21
NUP43-204ENST00000403890 NLRP13Q86W25 1043 aa13.74□□□□□ -0.21
NUP43-204ENST00000403890 MARCH10Q8NA82 808 aaPredicted RBP13.74□□□□□ -0.21
NUP43-204ENST00000403890 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
NUP43-204ENST00000403890 SBF2Q86WG5 1849 aa13.74□□□□□ -0.21
NUP43-204ENST00000403890 POLR3AO14802 1390 aaPredicted RBP13.73□□□□□ -0.21
NUP43-204ENST00000403890 LMO7Q8WWI1 1683 aa13.73□□□□□ -0.21
NUP43-204ENST00000403890 USP19O94966 1318 aa13.73□□□□□ -0.21
NUP43-204ENST00000403890 BCL9O00512 1426 aa13.73□□□□□ -0.21
NUP43-204ENST00000403890 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
NUP43-204ENST00000403890 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
NUP43-204ENST00000403890 CDCA7Q9BWT1 371 aaPredicted RBP13.72□□□□□ -0.21
NUP43-204ENST00000403890 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
NUP43-204ENST00000403890 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.21
NUP43-204ENST00000403890 LHX8Q68G74 356 aa13.71□□□□□ -0.21
NUP43-204ENST00000403890 CDK19Q9BWU1 502 aa13.71□□□□□ -0.21
NUP43-204ENST00000403890 ZBTB7CA1YPR0 619 aa13.7□□□□□ -0.22
NUP43-204ENST00000403890 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
NUP43-204ENST00000403890 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
NUP43-204ENST00000403890 ITSN1Q15811 1721 aa13.68□□□□□ -0.22
NUP43-204ENST00000403890 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
NUP43-204ENST00000403890 EXOC5O00471 708 aa13.67□□□□□ -0.22
NUP43-204ENST00000403890 KDM2AQ9Y2K7 1162 aa13.67□□□□□ -0.22
NUP43-204ENST00000403890 LRRC37A3O60309 1634 aa13.67□□□□□ -0.22
NUP43-204ENST00000403890 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
NUP43-204ENST00000403890 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
NUP43-204ENST00000403890 GRIN3BO60391 1043 aa13.65□□□□□ -0.22
NUP43-204ENST00000403890 HSPA6P17066 643 aa13.65□□□□□ -0.22
NUP43-204ENST00000403890 POLD1P28340 1107 aa13.65□□□□□ -0.22
NUP43-204ENST00000403890 NLRP6P59044 892 aa13.65□□□□□ -0.22
NUP43-204ENST00000403890 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
NUP43-204ENST00000403890 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.23
NUP43-204ENST00000403890 DCAF11Q8TEB1 546 aa13.64□□□□□ -0.23
NUP43-204ENST00000403890 CARD10Q9BWT7 1032 aa13.64□□□□□ -0.23
NUP43-204ENST00000403890 AXIN2Q9Y2T1 843 aa13.64□□□□□ -0.23
NUP43-204ENST00000403890 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
NUP43-204ENST00000403890 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
NUP43-204ENST00000403890 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
NUP43-204ENST00000403890 CSB-PGBD3P0DP91 1061 aa13.62□□□□□ -0.23
NUP43-204ENST00000403890 ZNF827Q17R98 1081 aa13.62□□□□□ -0.23
NUP43-204ENST00000403890 NLGN2Q8NFZ4 835 aa13.62□□□□□ -0.23
NUP43-204ENST00000403890 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
NUP43-204ENST00000403890 ACSBG1Q96GR2 724 aa13.61□□□□□ -0.23
NUP43-204ENST00000403890 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.231e-8■□□□□ 10.1
NUP43-204ENST00000403890 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
NUP43-204ENST00000403890 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
NUP43-204ENST00000403890 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
NUP43-204ENST00000403890 LRRC4BQ9NT99 713 aa13.6□□□□□ -0.23
NUP43-204ENST00000403890 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
NUP43-204ENST00000403890 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
NUP43-204ENST00000403890 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
NUP43-204ENST00000403890 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms