RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CARD11Q9BXL7 1154 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 TSPYL2Q9H2G4 693 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 STMN4Q9H169 189 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 A0A1B0GUA9 196 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 BICD1Q96G01 975 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 SETDB1Q15047 1291 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 RNF187Q5TA31 235 aaPredicted RBP10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 ODF2LQ9ULJ1 636 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 KANK1Q14678 1352 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 CACNA2D3Q8IZS8 1091 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 CCDC89Q8N998 374 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 ZNF396Q96N95 335 aaPredicted RBP10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 RCAN3Q9UKA8 241 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 CCDC150Q8NCX0 1101 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 NAA16Q6N069 864 aaPredicted RBP10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 UBXN4Q92575 508 aa10.05□□□□□ -0.8
CACNA1C-220ENST00000399655 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 SMC1BQ8NDV3 1235 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 NINLQ9Y2I6 1382 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 CEP57L1Q8IYX8 460 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 VCXQ9H320 206 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 CASQ1P31415 396 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 CFAP100Q494V2 611 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 EIF2AQ9BY44 585 aaKnown RBP10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 CTAGE6Q86UF2 777 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 CCDC83Q8IWF9 413 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 PDCD7Q8N8D1 485 aaKnown RBP10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 RSPH3Q86UC2 560 aa10.04□□□□□ -0.8
CACNA1C-220ENST00000399655 TAF7Q15545 349 aaPredicted RBP10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 MAP7Q14244 749 aa10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 MORC1Q86VD1 984 aa10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 ANO2Q9NQ90 1003 aa10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 TNNT1P13805 278 aa10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 EEA1Q15075 1411 aa10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 MACROD2A1Z1Q3 448 aa10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 DHX37Q8IY37 1157 aaKnown RBP10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 CFDP1Q9UEE9 299 aaPredicted RBP10.03□□□□□ -0.8
CACNA1C-220ENST00000399655 ARID3CA6NKF2 412 aa10.02□□□□□ -0.8
CACNA1C-220ENST00000399655 CCDC192P0DO97 292 aa10.02□□□□□ -0.8
CACNA1C-220ENST00000399655 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 VCX3AQ9NNX9 186 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 GBP6Q6ZN66 633 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 BMP2KQ9NSY1 1161 aaPredicted RBP10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 USO1O60763 962 aaKnown RBP10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 SERPINC1P01008 464 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 RGS22Q8NE09 1264 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 NUF2Q9BZD4 464 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 IQCGQ9H095 443 aaKnown RBP10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 TSPY26PQ9H489 355 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 PSMA5P28066 241 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 PSMC4P43686 418 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 ARHGAP29Q52LW3 1261 aa10.02□□□□□ -0.81
CACNA1C-220ENST00000399655 MXRA7P84157 204 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 KIAA1524Q8TCG1 905 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 ERCC6LQ2NKX8 1250 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 NUP133Q8WUM0 1156 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 CGNQ9P2M7 1197 aaKnown RBP10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 PHLDB2Q86SQ0 1253 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 VPS37CA5D8V6 355 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 CCER2I3L3R5 266 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 RILPL2Q969X0 211 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 PLVAPQ9BX97 442 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 CACYBPQ9HB71 228 aaKnown RBP10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 CEP131Q9UPN4 1083 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 MCM2P49736 904 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 TRIM60Q495X7 471 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 EPSTI1Q96J88 318 aa10.01□□□□□ -0.81
CACNA1C-220ENST00000399655 ARMC9Q7Z3E5 817 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 MIER3Q7Z3K6 550 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 ACTN2P35609 894 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 RAP1GDS1P52306 607 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 MTUS1Q9ULD2 1270 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 AEBP2Q6ZN18 517 aaPredicted RBP10□□□□□ -0.81
CACNA1C-220ENST00000399655 MKL2Q9ULH7 1088 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 ALDH3A1P30838 453 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 ZSCAN12O43309 604 aa10□□□□□ -0.81
CACNA1C-220ENST00000399655 UQCRHLA0A096LP55 91 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 UQCRHP07919 91 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 ZNF365Q70YC5 407 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 FILIP1Q7Z7B0 1213 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 SPA17Q15506 151 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 RPGRIP1Q96KN7 1286 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 ATP2A3Q93084 1043 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 SATB2Q9UPW6 733 aa9.99□□□□□ -0.81
CACNA1C-220ENST00000399655 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms