RNA–Protein interactions for RNA: ENST00000397317.8

CLDN7-202, Transcript of claudin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN7, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-202ENST00000397317 CCDC9Q9Y3X0 531 aaKnown RBP24.44■■□□□ 1.5
CLDN7-202ENST00000397317 COL18A1P39060 1754 aa24.44■■□□□ 1.5
CLDN7-202ENST00000397317 COL5A2P05997 1499 aaPredicted RBP24.43■■□□□ 1.5
CLDN7-202ENST00000397317 LTN1O94822 1766 aa24.42■■□□□ 1.5
CLDN7-202ENST00000397317 SPATA31A5Q5VU36 1347 aa24.4■■□□□ 1.5
CLDN7-202ENST00000397317 SPATA31A7Q8IWB4 1347 aa24.4■■□□□ 1.5
CLDN7-202ENST00000397317 PER1O15534 1290 aaPredicted RBP24.4■■□□□ 1.5
CLDN7-202ENST00000397317 AXIN2Q9Y2T1 843 aa24.4■■□□□ 1.5
CLDN7-202ENST00000397317 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
CLDN7-202ENST00000397317 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.5
CLDN7-202ENST00000397317 GLI3P10071 1580 aa24.39■■□□□ 1.5
CLDN7-202ENST00000397317 BLMP54132 1417 aaPredicted RBP24.38■■□□□ 1.49
CLDN7-202ENST00000397317 AMER1Q5JTC6 1135 aaPredicted RBP24.38■■□□□ 1.49
CLDN7-202ENST00000397317 AMPHP49418 695 aa24.37■■□□□ 1.49
CLDN7-202ENST00000397317 LARP1Q6PKG0 1096 aaKnown RBP24.37■■□□□ 1.49
CLDN7-202ENST00000397317 IP6K1Q92551 441 aa24.37■■□□□ 1.49
CLDN7-202ENST00000397317 RTL1A6NKG5 1358 aa24.37■■□□□ 1.49
CLDN7-202ENST00000397317 SPATA31A1Q5TZJ5 1347 aa24.36■■□□□ 1.49
CLDN7-202ENST00000397317 WDR17Q8IZU2 1322 aa24.36■■□□□ 1.49
CLDN7-202ENST00000397317 FBLN1P23142 703 aa24.36■■□□□ 1.49
CLDN7-202ENST00000397317 KIF24Q5T7B8 1368 aa24.36■■□□□ 1.49
CLDN7-202ENST00000397317 RGS12O14924 1447 aa24.35■■□□□ 1.49
CLDN7-202ENST00000397317 CRB1P82279 1406 aa24.35■■□□□ 1.49
CLDN7-202ENST00000397317 RRS1Q15050 365 aaKnown RBP24.35■■□□□ 1.49
CLDN7-202ENST00000397317 MORC1Q86VD1 984 aa24.35■■□□□ 1.49
CLDN7-202ENST00000397317 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
CLDN7-202ENST00000397317 CSB-PGBD3P0DP91 1061 aa24.34■■□□□ 1.49
CLDN7-202ENST00000397317 ONECUT3O60422 494 aaPredicted RBP24.33■■□□□ 1.49
CLDN7-202ENST00000397317 HOXC9P31274 260 aa24.33■■□□□ 1.49
CLDN7-202ENST00000397317 TOM1L2Q6ZVM7 507 aa24.33■■□□□ 1.49
CLDN7-202ENST00000397317 RGPD5Q99666 1765 aa24.33■■□□□ 1.49
CLDN7-202ENST00000397317 ERBB3P21860 1342 aa24.33■■□□□ 1.48
CLDN7-202ENST00000397317 THRAP3Q9Y2W1 955 aaKnown RBP24.32■■□□□ 1.48
CLDN7-202ENST00000397317 FLT4P35916 1363 aa24.31■■□□□ 1.48
CLDN7-202ENST00000397317 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
CLDN7-202ENST00000397317 ANKRD24Q8TF21 1146 aa24.31■■□□□ 1.48
CLDN7-202ENST00000397317 UPF1Q92900 1129 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLDN7-202ENST00000397317 TNNT2P45379 298 aaPredicted RBP24.3■■□□□ 1.48
CLDN7-202ENST00000397317 FAM98CQ17RN3 349 aaKnown RBP24.3■■□□□ 1.48
CLDN7-202ENST00000397317 USP35Q9P2H5 1018 aa24.3■■□□□ 1.48
CLDN7-202ENST00000397317 BARGINQ6ZT62 677 aa24.29■■□□□ 1.48
CLDN7-202ENST00000397317 SEPT12Q8IYM1 358 aa24.28■■□□□ 1.48
CLDN7-202ENST00000397317 CARD10Q9BWT7 1032 aa24.28■■□□□ 1.48
CLDN7-202ENST00000397317 EMILIN1Q9Y6C2 1016 aa24.28■■□□□ 1.48
CLDN7-202ENST00000397317 INSRP06213 1382 aa24.28■■□□□ 1.48
CLDN7-202ENST00000397317 A0A0G2JS52 829 aa24.27■■□□□ 1.48
CLDN7-202ENST00000397317 MYT1Q01538 1121 aa24.27■■□□□ 1.48
CLDN7-202ENST00000397317 CC2D1BQ5T0F9 858 aaKnown RBP24.27■■□□□ 1.48
CLDN7-202ENST00000397317 POLKQ9UBT6 870 aa24.27■■□□□ 1.48
CLDN7-202ENST00000397317 SMG6Q86US8 1419 aaKnown RBP24.27■■□□□ 1.48
CLDN7-202ENST00000397317 PEAK1Q9H792 1746 aa24.26■■□□□ 1.47
CLDN7-202ENST00000397317 FAM208AQ9UK61 1670 aaKnown RBP24.25■■□□□ 1.47
CLDN7-202ENST00000397317 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
CLDN7-202ENST00000397317 LTV1Q96GA3 475 aaPredicted RBP24.25■■□□□ 1.47
CLDN7-202ENST00000397317 NLRP2Q9NX02 1062 aa24.25■■□□□ 1.47
CLDN7-202ENST00000397317 MAP2P11137 1827 aaKnown RBP24.25■■□□□ 1.47
CLDN7-202ENST00000397317 THSD7AQ9UPZ6 1657 aa24.24■■□□□ 1.47
CLDN7-202ENST00000397317 HSP90AB2PQ58FF8 381 aa24.24■■□□□ 1.47
CLDN7-202ENST00000397317 CDCA7Q9BWT1 371 aaPredicted RBP24.23■■□□□ 1.47
CLDN7-202ENST00000397317 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
CLDN7-202ENST00000397317 ZNF316A6NFI3 1004 aaPredicted RBP24.19■■□□□ 1.46
CLDN7-202ENST00000397317 KRT27Q7Z3Y8 459 aa24.19■■□□□ 1.46
CLDN7-202ENST00000397317 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
CLDN7-202ENST00000397317 BRWD3Q6RI45 1802 aa24.17■■□□□ 1.46
CLDN7-202ENST00000397317 PARP4Q9UKK3 1724 aaKnown RBP24.16■■□□□ 1.46
CLDN7-202ENST00000397317 WNK3Q9BYP7 1800 aa24.16■■□□□ 1.46
CLDN7-202ENST00000397317 DISP2A7MBM2 1401 aa24.16■■□□□ 1.46
CLDN7-202ENST00000397317 IL2RBP14784 551 aa24.14■■□□□ 1.45
CLDN7-202ENST00000397317 PDE3BQ13370 1112 aa24.14■■□□□ 1.45
CLDN7-202ENST00000397317 NBPF6Q5VWK0 638 aa24.14■■□□□ 1.45
CLDN7-202ENST00000397317 NBPF4Q96M43 638 aa24.14■■□□□ 1.45
CLDN7-202ENST00000397317 MTHFSP49914 203 aa24.13■■□□□ 1.45
CLDN7-202ENST00000397317 DDB1Q16531 1140 aa24.13■■□□□ 1.45
CLDN7-202ENST00000397317 EIF4A2Q14240 407 aaKnown RBP24.11■■□□□ 1.45
CLDN7-202ENST00000397317 LRRC37A3O60309 1634 aa24.1■■□□□ 1.45
CLDN7-202ENST00000397317 RGPD2P0DJD1 1756 aa24.1■■□□□ 1.45
CLDN7-202ENST00000397317 EXOC5O00471 708 aa24.09■■□□□ 1.45
CLDN7-202ENST00000397317 PARD3Q8TEW0 1356 aa24.08■■□□□ 1.45
CLDN7-202ENST00000397317 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
CLDN7-202ENST00000397317 NCAPD2Q15021 1401 aa24.08■■□□□ 1.44
CLDN7-202ENST00000397317 TNS2Q63HR2 1409 aa24.08■■□□□ 1.44
CLDN7-202ENST00000397317 RAPGEF4Q8WZA2 1011 aa24.07■■□□□ 1.44
CLDN7-202ENST00000397317 EYA1Q99502 592 aa24.07■■□□□ 1.44
CLDN7-202ENST00000397317 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
CLDN7-202ENST00000397317 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
CLDN7-202ENST00000397317 TATP17735 454 aaPredicted RBP24.04■■□□□ 1.44
CLDN7-202ENST00000397317 RALBP1Q15311 655 aa24.04■■□□□ 1.44
CLDN7-202ENST00000397317 IGSF1Q8N6C5 1336 aa24.04■■□□□ 1.44
CLDN7-202ENST00000397317 MEGF6O75095 1541 aa24.04■■□□□ 1.44
CLDN7-202ENST00000397317 OVOS2A0A0G2JMS6 1433 aa24.03■■□□□ 1.44
CLDN7-202ENST00000397317 IL13P35225 146 aa24.03■■□□□ 1.44
CLDN7-202ENST00000397317 FAM182BQ5T319 152 aa24.03■■□□□ 1.44
CLDN7-202ENST00000397317 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
CLDN7-202ENST00000397317 DIAPH1O60610 1272 aaKnown RBP24.02■■□□□ 1.44
CLDN7-202ENST00000397317 CCDC125Q86Z20 511 aa24.02■■□□□ 1.44
CLDN7-202ENST00000397317 MARCH10Q8NA82 808 aaPredicted RBP24■■□□□ 1.43
CLDN7-202ENST00000397317 PLEKHG2Q9H7P9 1386 aa24■■□□□ 1.43
CLDN7-202ENST00000397317 COL3A1P02461 1466 aaPredicted RBP24■■□□□ 1.43
CLDN7-202ENST00000397317 ZCRB1Q8TBF4 217 aaKnown RBP23.99■■□□□ 1.43
CLDN7-202ENST00000397317 SRCAPQ6ZRS2 3230 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms