RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
CAPN3-208ENST00000397204 CAMKK2Q96RR4 588 aa12.71□□□□□ -0.37
CAPN3-208ENST00000397204 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
CAPN3-208ENST00000397204 TRIM37O94972 964 aa12.7□□□□□ -0.38
CAPN3-208ENST00000397204 PDE3BQ13370 1112 aa12.7□□□□□ -0.38
CAPN3-208ENST00000397204 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
CAPN3-208ENST00000397204 NLRP13Q86W25 1043 aa12.7□□□□□ -0.38
CAPN3-208ENST00000397204 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
CAPN3-208ENST00000397204 GABBR2O75899 941 aa12.69□□□□□ -0.38
CAPN3-208ENST00000397204 APBA3O96018 575 aa12.69□□□□□ -0.38
CAPN3-208ENST00000397204 ATP7BP35670 1465 aa12.69□□□□□ -0.38
CAPN3-208ENST00000397204 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
CAPN3-208ENST00000397204 C11orf95C9JLR9 678 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-208ENST00000397204 GCP02774 474 aa12.68□□□□□ -0.38
CAPN3-208ENST00000397204 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
CAPN3-208ENST00000397204 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
CAPN3-208ENST00000397204 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
CAPN3-208ENST00000397204 USP35Q9P2H5 1018 aa12.68□□□□□ -0.38
CAPN3-208ENST00000397204 THRAP3Q9Y2W1 955 aaKnown RBP12.68□□□□□ -0.38
CAPN3-208ENST00000397204 LARP1Q6PKG0 1096 aaKnown RBP12.67□□□□□ -0.38
CAPN3-208ENST00000397204 CPDO75976 1380 aa12.67□□□□□ -0.38
CAPN3-208ENST00000397204 PARD3Q8TEW0 1356 aa12.67□□□□□ -0.38
CAPN3-208ENST00000397204 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
CAPN3-208ENST00000397204 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
CAPN3-208ENST00000397204 BRD4O60885 1362 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-208ENST00000397204 USP19O94966 1318 aa12.65□□□□□ -0.38
CAPN3-208ENST00000397204 SSH2Q76I76 1423 aa12.65□□□□□ -0.38
CAPN3-208ENST00000397204 LRP5O75197 1615 aa12.65□□□□□ -0.38
CAPN3-208ENST00000397204 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-208ENST00000397204 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
CAPN3-208ENST00000397204 CABP2Q9NPB3 220 aa12.64□□□□□ -0.39
CAPN3-208ENST00000397204 CABP1Q9NZU7 370 aa12.63□□□□□ -0.39
CAPN3-208ENST00000397204 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
CAPN3-208ENST00000397204 NLRP6P59044 892 aa12.62□□□□□ -0.39
CAPN3-208ENST00000397204 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
CAPN3-208ENST00000397204 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
CAPN3-208ENST00000397204 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
CAPN3-208ENST00000397204 ITSN1Q15811 1721 aa12.61□□□□□ -0.39
CAPN3-208ENST00000397204 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
CAPN3-208ENST00000397204 ARHGEF28Q8N1W1 1705 aaKnown RBP12.6□□□□□ -0.39
CAPN3-208ENST00000397204 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
CAPN3-208ENST00000397204 PLSCR1O15162 318 aa12.59□□□□□ -0.39
CAPN3-208ENST00000397204 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
CAPN3-208ENST00000397204 DDB1Q16531 1140 aa12.58□□□□□ -0.4
CAPN3-208ENST00000397204 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
CAPN3-208ENST00000397204 CDCA7Q9BWT1 371 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-208ENST00000397204 EVC2Q86UK5 1308 aa12.58□□□□□ -0.4
CAPN3-208ENST00000397204 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 CRB1P82279 1406 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 CLCN6P51797 869 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 TOM1L2Q6ZVM7 507 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 KCNH5Q8NCM2 988 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 L3MBTL2Q969R5 705 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-208ENST00000397204 SPON1Q9HCB6 807 aa12.57□□□□□ -0.4
CAPN3-208ENST00000397204 PHRF1Q9P1Y6 1649 aaKnown RBP12.57□□□□□ -0.4
CAPN3-208ENST00000397204 USP6P35125 1406 aa12.56□□□□□ -0.4
CAPN3-208ENST00000397204 KCNQ2O43526 872 aa12.56□□□□□ -0.4
CAPN3-208ENST00000397204 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-208ENST00000397204 ARHGEF25Q86VW2 580 aa12.56□□□□□ -0.4
CAPN3-208ENST00000397204 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
CAPN3-208ENST00000397204 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-208ENST00000397204 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
CAPN3-208ENST00000397204 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-208ENST00000397204 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
CAPN3-208ENST00000397204 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
CAPN3-208ENST00000397204 TOPAZ1Q8N9V7 1692 aa12.54□□□□□ -0.4
CAPN3-208ENST00000397204 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
CAPN3-208ENST00000397204 NRKQ7Z2Y5 1582 aa12.54□□□□□ -0.4
CAPN3-208ENST00000397204 LMO7Q8WWI1 1683 aa12.54□□□□□ -0.4
CAPN3-208ENST00000397204 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
CAPN3-208ENST00000397204 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
CAPN3-208ENST00000397204 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
CAPN3-208ENST00000397204 EXOC5O00471 708 aa12.53□□□□□ -0.4
CAPN3-208ENST00000397204 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-208ENST00000397204 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
CAPN3-208ENST00000397204 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
CAPN3-208ENST00000397204 CSB-PGBD3P0DP91 1061 aa12.51□□□□□ -0.41
CAPN3-208ENST00000397204 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
CAPN3-208ENST00000397204 BCL9O00512 1426 aa12.51□□□□□ -0.41
CAPN3-208ENST00000397204 MAP3K13O43283 966 aa12.5□□□□□ -0.41
CAPN3-208ENST00000397204 YY1P25490 414 aa12.5□□□□□ -0.41
CAPN3-208ENST00000397204 SIN3AQ96ST3 1273 aa12.5□□□□□ -0.41
CAPN3-208ENST00000397204 SLIT3O75094 1523 aa12.5□□□□□ -0.41
CAPN3-208ENST00000397204 GSE1Q14687 1217 aa12.49□□□□□ -0.41
CAPN3-208ENST00000397204 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
CAPN3-208ENST00000397204 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
CAPN3-208ENST00000397204 CPSF1Q10570 1443 aaKnown RBP12.48□□□□□ -0.41
CAPN3-208ENST00000397204 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
CAPN3-208ENST00000397204 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
CAPN3-208ENST00000397204 SOX12O15370 315 aa12.48□□□□□ -0.41
CAPN3-208ENST00000397204 NEUROD1Q13562 356 aa12.48□□□□□ -0.41
CAPN3-208ENST00000397204 TXNRD1Q16881 649 aa12.48□□□□□ -0.41
CAPN3-208ENST00000397204 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-208ENST00000397204 RREB1Q92766 1687 aa12.48□□□□□ -0.41
CAPN3-208ENST00000397204 KTN1Q86UP2 1357 aaKnown RBP12.47□□□□□ -0.41
CAPN3-208ENST00000397204 CCDC7Q96M83 1385 aa12.47□□□□□ -0.41
CAPN3-208ENST00000397204 PYGBP11216 843 aa12.47□□□□□ -0.41
CAPN3-208ENST00000397204 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms