RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 NME9Q86XW9 330 aa17.62■□□□□ 0.41
PSMA1-201ENST00000396394 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
PSMA1-201ENST00000396394 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
PSMA1-201ENST00000396394 BRWD3Q6RI45 1802 aa17.61■□□□□ 0.41
PSMA1-201ENST00000396394 BLMP54132 1417 aaPredicted RBP17.61■□□□□ 0.41
PSMA1-201ENST00000396394 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
PSMA1-201ENST00000396394 ZRANB1Q9UGI0 708 aa17.6■□□□□ 0.41
PSMA1-201ENST00000396394 AXIN2Q9Y2T1 843 aa17.6■□□□□ 0.41
PSMA1-201ENST00000396394 ANKRD36BQ8N2N9 1353 aa17.59■□□□□ 0.41
PSMA1-201ENST00000396394 THSD7AQ9UPZ6 1657 aa17.59■□□□□ 0.41
PSMA1-201ENST00000396394 CRB1P82279 1406 aa17.59■□□□□ 0.41
PSMA1-201ENST00000396394 SOX12O15370 315 aa17.58■□□□□ 0.41
PSMA1-201ENST00000396394 SF3B2Q13435 895 aaKnown RBP17.58■□□□□ 0.41
PSMA1-201ENST00000396394 NFAT5O94916 1531 aa17.57■□□□□ 0.4
PSMA1-201ENST00000396394 USP54Q70EL1 1684 aa17.57■□□□□ 0.4
PSMA1-201ENST00000396394 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
PSMA1-201ENST00000396394 COL18A1P39060 1754 aa17.57■□□□□ 0.4
PSMA1-201ENST00000396394 TOM1L2Q6ZVM7 507 aa17.57■□□□□ 0.4
PSMA1-201ENST00000396394 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
PSMA1-201ENST00000396394 ABCC6O95255 1503 aa17.55■□□□□ 0.4
PSMA1-201ENST00000396394 ANP32CO43423 234 aa17.55■□□□□ 0.4
PSMA1-201ENST00000396394 OVOS2A0A0J9YW53 1432 aa17.54■□□□□ 0.4
PSMA1-201ENST00000396394 OVOS2Q6IE36 1432 aa17.54■□□□□ 0.4
PSMA1-201ENST00000396394 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
PSMA1-201ENST00000396394 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
PSMA1-201ENST00000396394 COG3Q96JB2 828 aa17.54■□□□□ 0.4
PSMA1-201ENST00000396394 CARD10Q9BWT7 1032 aa17.53■□□□□ 0.4
PSMA1-201ENST00000396394 FAM182BQ5T319 152 aa17.52■□□□□ 0.4
PSMA1-201ENST00000396394 CDCA7Q9BWT1 371 aaPredicted RBP17.52■□□□□ 0.4
PSMA1-201ENST00000396394 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.39
PSMA1-201ENST00000396394 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
PSMA1-201ENST00000396394 FYB1O15117 783 aa17.51■□□□□ 0.39
PSMA1-201ENST00000396394 BAG6P46379 1132 aa17.5■□□□□ 0.39
PSMA1-201ENST00000396394 DEFB132Q7Z7B7 95 aa17.5■□□□□ 0.39
PSMA1-201ENST00000396394 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
PSMA1-201ENST00000396394 ERBB3P21860 1342 aa17.48■□□□□ 0.39
PSMA1-201ENST00000396394 DDB1Q16531 1140 aa17.48■□□□□ 0.39
PSMA1-201ENST00000396394 IP6K1Q92551 441 aa17.48■□□□□ 0.39
PSMA1-201ENST00000396394 CCDC7Q96M83 1385 aa17.48■□□□□ 0.39
PSMA1-201ENST00000396394 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
PSMA1-201ENST00000396394 ANKRD24Q8TF21 1146 aa17.47■□□□□ 0.39
PSMA1-201ENST00000396394 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
PSMA1-201ENST00000396394 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
PSMA1-201ENST00000396394 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
PSMA1-201ENST00000396394 RGPD5Q99666 1765 aa17.46■□□□□ 0.39
PSMA1-201ENST00000396394 TRIM37O94972 964 aa17.45■□□□□ 0.38
PSMA1-201ENST00000396394 DISP2A7MBM2 1401 aa17.44■□□□□ 0.38
PSMA1-201ENST00000396394 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
PSMA1-201ENST00000396394 EXOC5O00471 708 aa17.44■□□□□ 0.38
PSMA1-201ENST00000396394 NLRP2Q9NX02 1062 aa17.44■□□□□ 0.38
PSMA1-201ENST00000396394 LTN1O94822 1766 aa17.44■□□□□ 0.38
PSMA1-201ENST00000396394 RGPD1P0DJD0 1748 aa17.43■□□□□ 0.38
PSMA1-201ENST00000396394 HOXC9P31274 260 aa17.43■□□□□ 0.38
PSMA1-201ENST00000396394 AMPHP49418 695 aa17.43■□□□□ 0.38
PSMA1-201ENST00000396394 EN1Q05925 392 aaPredicted RBP17.42■□□□□ 0.38
PSMA1-201ENST00000396394 OVOS2A0A0G2JMS6 1433 aa17.42■□□□□ 0.38
PSMA1-201ENST00000396394 MYOM1P52179 1685 aa17.42■□□□□ 0.38
PSMA1-201ENST00000396394 FBLN1P23142 703 aa17.42■□□□□ 0.38
PSMA1-201ENST00000396394 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
PSMA1-201ENST00000396394 BCL9O00512 1426 aa17.41■□□□□ 0.38
PSMA1-201ENST00000396394 APBA3O96018 575 aa17.41■□□□□ 0.38
PSMA1-201ENST00000396394 IL2RBP14784 551 aa17.41■□□□□ 0.38
PSMA1-201ENST00000396394 POLR3GLQ9BT43 218 aa17.41■□□□□ 0.38
PSMA1-201ENST00000396394 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
PSMA1-201ENST00000396394 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
PSMA1-201ENST00000396394 MARCH10Q8NA82 808 aaPredicted RBP17.4■□□□□ 0.38
PSMA1-201ENST00000396394 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
PSMA1-201ENST00000396394 RRS1Q15050 365 aaKnown RBP17.39■□□□□ 0.37
PSMA1-201ENST00000396394 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
PSMA1-201ENST00000396394 PARD3Q8TEW0 1356 aa17.39■□□□□ 0.37
PSMA1-201ENST00000396394 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
PSMA1-201ENST00000396394 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
PSMA1-201ENST00000396394 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
PSMA1-201ENST00000396394 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
PSMA1-201ENST00000396394 TNS1Q9HBL0 1735 aaKnown RBP17.37■□□□□ 0.37
PSMA1-201ENST00000396394 BCL11BQ9C0K0 894 aaPredicted RBP17.37■□□□□ 0.37
PSMA1-201ENST00000396394 PEAK1Q9H792 1746 aa17.36■□□□□ 0.37
PSMA1-201ENST00000396394 PANK3Q9H999 370 aa17.36■□□□□ 0.37
PSMA1-201ENST00000396394 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
PSMA1-201ENST00000396394 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
PSMA1-201ENST00000396394 INSRP06213 1382 aa17.34■□□□□ 0.37
PSMA1-201ENST00000396394 FLT4P35916 1363 aa17.34■□□□□ 0.37
PSMA1-201ENST00000396394 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
PSMA1-201ENST00000396394 PLSCR1O15162 318 aa17.34■□□□□ 0.37
PSMA1-201ENST00000396394 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
PSMA1-201ENST00000396394 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.37
PSMA1-201ENST00000396394 HSP90AB2PQ58FF8 381 aa17.33■□□□□ 0.37
PSMA1-201ENST00000396394 NBPF6Q5VWK0 638 aa17.31■□□□□ 0.36
PSMA1-201ENST00000396394 NBPF4Q96M43 638 aa17.31■□□□□ 0.36
PSMA1-201ENST00000396394 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
PSMA1-201ENST00000396394 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
PSMA1-201ENST00000396394 NSD2O96028 1365 aa17.3■□□□□ 0.36
PSMA1-201ENST00000396394 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
PSMA1-201ENST00000396394 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
PSMA1-201ENST00000396394 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
PSMA1-201ENST00000396394 NBPF14Q5TI25 921 aa17.28■□□□□ 0.36
PSMA1-201ENST00000396394 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
PSMA1-201ENST00000396394 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
PSMA1-201ENST00000396394 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
PSMA1-201ENST00000396394 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms