RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
VAMP1-202ENST00000396308 FBLN1P23142 703 aa20.46■□□□□ 0.87
VAMP1-202ENST00000396308 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
VAMP1-202ENST00000396308 LRRC59Q96AG4 307 aaKnown RBP20.46■□□□□ 0.87
VAMP1-202ENST00000396308 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
VAMP1-202ENST00000396308 COL22A1Q8NFW1 1626 aaPredicted RBP20.45■□□□□ 0.87
VAMP1-202ENST00000396308 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
VAMP1-202ENST00000396308 NEFMP07197 916 aa20.45■□□□□ 0.86
VAMP1-202ENST00000396308 HSPA1LP34931 641 aa20.44■□□□□ 0.86
VAMP1-202ENST00000396308 FAM208AQ9UK61 1670 aaKnown RBP20.43■□□□□ 0.86
VAMP1-202ENST00000396308 RGPD1P0DJD0 1748 aa20.42■□□□□ 0.86
VAMP1-202ENST00000396308 HOXC9P31274 260 aa20.42■□□□□ 0.86
VAMP1-202ENST00000396308 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
VAMP1-202ENST00000396308 ZBED9Q6R2W3 1325 aa20.4■□□□□ 0.86
VAMP1-202ENST00000396308 IP6K1Q92551 441 aa20.4■□□□□ 0.86
VAMP1-202ENST00000396308 RGPD5Q99666 1765 aa20.4■□□□□ 0.86
VAMP1-202ENST00000396308 CPDO75976 1380 aa20.39■□□□□ 0.85
VAMP1-202ENST00000396308 IL13P35225 146 aa20.39■□□□□ 0.85
VAMP1-202ENST00000396308 EIF4A2Q14240 407 aaKnown RBP20.39■□□□□ 0.85
VAMP1-202ENST00000396308 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.85
VAMP1-202ENST00000396308 ARHGEF25Q86VW2 580 aa20.39■□□□□ 0.85
VAMP1-202ENST00000396308 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
VAMP1-202ENST00000396308 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
VAMP1-202ENST00000396308 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
VAMP1-202ENST00000396308 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
VAMP1-202ENST00000396308 FCHSD2O94868 740 aa20.36■□□□□ 0.85
VAMP1-202ENST00000396308 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
VAMP1-202ENST00000396308 COL18A1P39060 1754 aa20.36■□□□□ 0.85
VAMP1-202ENST00000396308 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
VAMP1-202ENST00000396308 COL14A1Q05707 1796 aaKnown RBP20.34■□□□□ 0.85
VAMP1-202ENST00000396308 PRDM11Q9NQV5 511 aa20.34■□□□□ 0.85
VAMP1-202ENST00000396308 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
VAMP1-202ENST00000396308 RGPD2P0DJD1 1756 aa20.33■□□□□ 0.84
VAMP1-202ENST00000396308 CAMTA1Q9Y6Y1 1673 aa20.32■□□□□ 0.84
VAMP1-202ENST00000396308 LMO7Q8WWI1 1683 aa20.32■□□□□ 0.84
VAMP1-202ENST00000396308 HMOX1P09601 288 aa20.31■□□□□ 0.84
VAMP1-202ENST00000396308 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
VAMP1-202ENST00000396308 IGSF1Q8N6C5 1336 aa20.3■□□□□ 0.84
VAMP1-202ENST00000396308 APAF1O14727 1248 aa20.3■□□□□ 0.84
VAMP1-202ENST00000396308 RSPH6AQ9H0K4 717 aa20.3■□□□□ 0.84
VAMP1-202ENST00000396308 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
VAMP1-202ENST00000396308 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
VAMP1-202ENST00000396308 CSB-PGBD3P0DP91 1061 aa20.28■□□□□ 0.84
VAMP1-202ENST00000396308 TCP11L2Q8N4U5 519 aa20.28■□□□□ 0.84
VAMP1-202ENST00000396308 JCADQ9P266 1359 aa20.28■□□□□ 0.84
VAMP1-202ENST00000396308 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
VAMP1-202ENST00000396308 KDRP35968 1356 aa20.27■□□□□ 0.84
VAMP1-202ENST00000396308 PDE3BQ13370 1112 aa20.27■□□□□ 0.84
VAMP1-202ENST00000396308 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
VAMP1-202ENST00000396308 ERBB3P21860 1342 aa20.27■□□□□ 0.83
VAMP1-202ENST00000396308 DLG5Q8TDM6 1919 aa20.26■□□□□ 0.83
VAMP1-202ENST00000396308 CHRNA2Q15822 529 aa20.26■□□□□ 0.83
VAMP1-202ENST00000396308 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
VAMP1-202ENST00000396308 PLEKHF1Q96S99 279 aa20.26■□□□□ 0.83
VAMP1-202ENST00000396308 EYA1Q99502 592 aa20.26■□□□□ 0.83
VAMP1-202ENST00000396308 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
VAMP1-202ENST00000396308 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
VAMP1-202ENST00000396308 SENP3-EIF4A1A0A087X0R7 540 aa20.23■□□□□ 0.83
VAMP1-202ENST00000396308 NWD2Q9ULI1 1742 aa20.23■□□□□ 0.83
VAMP1-202ENST00000396308 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
VAMP1-202ENST00000396308 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
VAMP1-202ENST00000396308 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
VAMP1-202ENST00000396308 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
VAMP1-202ENST00000396308 AXIN2Q9Y2T1 843 aa20.22■□□□□ 0.83
VAMP1-202ENST00000396308 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
VAMP1-202ENST00000396308 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
VAMP1-202ENST00000396308 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
VAMP1-202ENST00000396308 CCDC27Q2M243 656 aa20.21■□□□□ 0.83
VAMP1-202ENST00000396308 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
VAMP1-202ENST00000396308 SPATA31A6Q5VVP1 1343 aa20.21■□□□□ 0.83
VAMP1-202ENST00000396308 EVA1CP58658 441 aa20.2■□□□□ 0.82
VAMP1-202ENST00000396308 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
VAMP1-202ENST00000396308 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
VAMP1-202ENST00000396308 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
VAMP1-202ENST00000396308 RIPK4P57078 832 aa20.19■□□□□ 0.82
VAMP1-202ENST00000396308 NBPF6Q5VWK0 638 aa20.19■□□□□ 0.82
VAMP1-202ENST00000396308 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
VAMP1-202ENST00000396308 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
VAMP1-202ENST00000396308 NBPF4Q96M43 638 aa20.19■□□□□ 0.82
VAMP1-202ENST00000396308 WDR17Q8IZU2 1322 aa20.19■□□□□ 0.82
VAMP1-202ENST00000396308 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
VAMP1-202ENST00000396308 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
VAMP1-202ENST00000396308 GOLGA2Q08379 1002 aa20.18■□□□□ 0.82
VAMP1-202ENST00000396308 USHBP1Q8N6Y0 703 aa20.18■□□□□ 0.82
VAMP1-202ENST00000396308 NRAPQ86VF7 1730 aa20.17■□□□□ 0.82
VAMP1-202ENST00000396308 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
VAMP1-202ENST00000396308 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
VAMP1-202ENST00000396308 FAM83GA6ND36 823 aa20.16■□□□□ 0.82
VAMP1-202ENST00000396308 ADAMTS2O95450 1211 aa20.16■□□□□ 0.82
VAMP1-202ENST00000396308 WWC1Q8IX03 1113 aa20.16■□□□□ 0.82
VAMP1-202ENST00000396308 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
VAMP1-202ENST00000396308 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
VAMP1-202ENST00000396308 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
VAMP1-202ENST00000396308 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
VAMP1-202ENST00000396308 ZNF521Q96K83 1311 aa20.15■□□□□ 0.82
VAMP1-202ENST00000396308 CRB1P82279 1406 aa20.14■□□□□ 0.81
VAMP1-202ENST00000396308 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
VAMP1-202ENST00000396308 PLEKHO1Q53GL0 409 aaPredicted RBP20.14■□□□□ 0.81
VAMP1-202ENST00000396308 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
VAMP1-202ENST00000396308 PKD1L3Q7Z443 1732 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms