RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 MAP3K19Q56UN5 1328 aa13.82□□□□□ -0.2
THUMPD1-202ENST00000396083 CAMTA1Q9Y6Y1 1673 aa13.82□□□□□ -0.2
THUMPD1-202ENST00000396083 RGPD5Q99666 1765 aa13.82□□□□□ -0.2
THUMPD1-202ENST00000396083 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
THUMPD1-202ENST00000396083 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
THUMPD1-202ENST00000396083 TOM1L2Q6ZVM7 507 aa13.81□□□□□ -0.2
THUMPD1-202ENST00000396083 MORC1Q86VD1 984 aa13.8□□□□□ -0.2
THUMPD1-202ENST00000396083 KIF20BQ96Q89 1820 aa13.8□□□□□ -0.2
THUMPD1-202ENST00000396083 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
THUMPD1-202ENST00000396083 FAM182BQ5T319 152 aa13.8□□□□□ -0.2
THUMPD1-202ENST00000396083 SLIT3O75094 1523 aa13.8□□□□□ -0.2
THUMPD1-202ENST00000396083 LTN1O94822 1766 aa13.8□□□□□ -0.2
THUMPD1-202ENST00000396083 PER1O15534 1290 aaPredicted RBP13.79□□□□□ -0.2
THUMPD1-202ENST00000396083 NFAT5O94916 1531 aa13.79□□□□□ -0.2
THUMPD1-202ENST00000396083 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
THUMPD1-202ENST00000396083 CPDO75976 1380 aa13.79□□□□□ -0.2
THUMPD1-202ENST00000396083 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
THUMPD1-202ENST00000396083 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
THUMPD1-202ENST00000396083 NLRP2Q9NX02 1062 aa13.78□□□□□ -0.2
THUMPD1-202ENST00000396083 VPS72Q15906 364 aa13.77□□□□□ -0.21
THUMPD1-202ENST00000396083 AATKQ6ZMQ8 1374 aa13.77□□□□□ -0.21
THUMPD1-202ENST00000396083 HOXC9P31274 260 aa13.77□□□□□ -0.21
THUMPD1-202ENST00000396083 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
THUMPD1-202ENST00000396083 ANKRD24Q8TF21 1146 aa13.77□□□□□ -0.21
THUMPD1-202ENST00000396083 KAT6BQ8WYB5 2073 aa13.76□□□□□ -0.21
THUMPD1-202ENST00000396083 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
THUMPD1-202ENST00000396083 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
THUMPD1-202ENST00000396083 ATRNO75882 1429 aa13.76□□□□□ -0.21
THUMPD1-202ENST00000396083 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
THUMPD1-202ENST00000396083 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
THUMPD1-202ENST00000396083 POLKQ9UBT6 870 aa13.75□□□□□ -0.21
THUMPD1-202ENST00000396083 ERBB3P21860 1342 aa13.75□□□□□ -0.21
THUMPD1-202ENST00000396083 NWD2Q9ULI1 1742 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 SPATA31A1Q5TZJ5 1347 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 SPATA31A5Q5VU36 1347 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 SPATA31A7Q8IWB4 1347 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 IP6K1Q92551 441 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 GLI3P10071 1580 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 RGS12O14924 1447 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 LMO7Q8WWI1 1683 aa13.74□□□□□ -0.21
THUMPD1-202ENST00000396083 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
THUMPD1-202ENST00000396083 COL18A1P39060 1754 aa13.73□□□□□ -0.21
THUMPD1-202ENST00000396083 TCP11L2Q8N4U5 519 aa13.72□□□□□ -0.21
THUMPD1-202ENST00000396083 MTHFSP49914 203 aa13.71□□□□□ -0.21
THUMPD1-202ENST00000396083 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 CRB1P82279 1406 aa13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 FLT4P35916 1363 aa13.7□□□□□ -0.22
THUMPD1-202ENST00000396083 NSD2O96028 1365 aa13.68□□□□□ -0.22
THUMPD1-202ENST00000396083 ANKRD26Q9UPS8 1709 aa13.68□□□□□ -0.22
THUMPD1-202ENST00000396083 DIEXFQ68CQ4 756 aaKnown RBP13.67□□□□□ -0.22
THUMPD1-202ENST00000396083 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
THUMPD1-202ENST00000396083 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
THUMPD1-202ENST00000396083 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
THUMPD1-202ENST00000396083 KRT27Q7Z3Y8 459 aa13.67□□□□□ -0.22
THUMPD1-202ENST00000396083 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
THUMPD1-202ENST00000396083 BLMP54132 1417 aaPredicted RBP13.66□□□□□ -0.22
THUMPD1-202ENST00000396083 DDB1Q16531 1140 aa13.65□□□□□ -0.22
THUMPD1-202ENST00000396083 EYA1Q99502 592 aa13.65□□□□□ -0.22
THUMPD1-202ENST00000396083 INSRP06213 1382 aa13.65□□□□□ -0.22
THUMPD1-202ENST00000396083 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
THUMPD1-202ENST00000396083 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
THUMPD1-202ENST00000396083 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
THUMPD1-202ENST00000396083 AEBP1Q8IUX7 1158 aa13.64□□□□□ -0.23
THUMPD1-202ENST00000396083 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
THUMPD1-202ENST00000396083 HMOX1P09601 288 aa13.63□□□□□ -0.23
THUMPD1-202ENST00000396083 IL2RBP14784 551 aa13.63□□□□□ -0.23
THUMPD1-202ENST00000396083 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
THUMPD1-202ENST00000396083 PPP2R1AP30153 589 aa13.63□□□□□ -0.23
THUMPD1-202ENST00000396083 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
THUMPD1-202ENST00000396083 EXOC5O00471 708 aa13.62□□□□□ -0.23
THUMPD1-202ENST00000396083 RAPGEF4Q8WZA2 1011 aa13.62□□□□□ -0.23
THUMPD1-202ENST00000396083 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
THUMPD1-202ENST00000396083 SOCS7O14512 581 aa13.61□□□□□ -0.23
THUMPD1-202ENST00000396083 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
THUMPD1-202ENST00000396083 SULT6B1Q6IMI4 303 aa13.6□□□□□ -0.23
THUMPD1-202ENST00000396083 TRIM37O94972 964 aa13.6□□□□□ -0.23
THUMPD1-202ENST00000396083 MARCH10Q8NA82 808 aaPredicted RBP13.6□□□□□ -0.23
THUMPD1-202ENST00000396083 ACSBG1Q96GR2 724 aa13.6□□□□□ -0.23
THUMPD1-202ENST00000396083 MEGF6O75095 1541 aa13.6□□□□□ -0.23
THUMPD1-202ENST00000396083 PTF1AQ7RTS3 328 aa13.6□□□□□ -0.23
THUMPD1-202ENST00000396083 NPC1L1Q9UHC9 1359 aa13.59□□□□□ -0.23
THUMPD1-202ENST00000396083 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
THUMPD1-202ENST00000396083 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.236e-6■■■■□ 21.9
THUMPD1-202ENST00000396083 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
THUMPD1-202ENST00000396083 IL13P35225 146 aa13.58□□□□□ -0.24
THUMPD1-202ENST00000396083 DEFB132Q7Z7B7 95 aa13.58□□□□□ -0.24
THUMPD1-202ENST00000396083 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.24
THUMPD1-202ENST00000396083 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
THUMPD1-202ENST00000396083 ABCC6O95255 1503 aa13.58□□□□□ -0.24
THUMPD1-202ENST00000396083 THSD7AQ9UPZ6 1657 aa13.57□□□□□ -0.24
THUMPD1-202ENST00000396083 SENP3-EIF4A1A0A087X0R7 540 aa13.57□□□□□ -0.24
THUMPD1-202ENST00000396083 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms