RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
MSH5-205ENST00000395853 TRPM2O94759 1503 aa11.16□□□□□ -0.62
MSH5-205ENST00000395853 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
MSH5-205ENST00000395853 KCNJ4P48050 445 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 RGL3Q3MIN7 710 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 ZSCAN30Q86W11 494 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 CHMP4CQ96CF2 233 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 CARD10Q9BWT7 1032 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 CCDC144AA2RUR9 1427 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 SMG6Q86US8 1419 aaKnown RBP11.15□□□□□ -0.62
MSH5-205ENST00000395853 RALGAPBQ86X10 1494 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
MSH5-205ENST00000395853 CBX1P83916 185 aa11.15□□□□□ -0.63
MSH5-205ENST00000395853 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
MSH5-205ENST00000395853 CARD11Q9BXL7 1154 aa11.14□□□□□ -0.63
MSH5-205ENST00000395853 CCDC184Q52MB2 194 aa11.13□□□□□ -0.63
MSH5-205ENST00000395853 BRINP3Q76B58 766 aa11.13□□□□□ -0.63
MSH5-205ENST00000395853 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
MSH5-205ENST00000395853 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
MSH5-205ENST00000395853 EGFL6Q8IUX8 553 aa11.12□□□□□ -0.63
MSH5-205ENST00000395853 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
MSH5-205ENST00000395853 PRKRIP1Q9H875 184 aaPredicted RBP11.12□□□□□ -0.63
MSH5-205ENST00000395853 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
MSH5-205ENST00000395853 E9PCH4 1651 aa11.11□□□□□ -0.63
MSH5-205ENST00000395853 XRN1Q8IZH2 1706 aaKnown RBP11.11□□□□□ -0.63
MSH5-205ENST00000395853 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
MSH5-205ENST00000395853 AMOTL2Q9Y2J4 779 aa11.11□□□□□ -0.63
MSH5-205ENST00000395853 AFF2P51816 1311 aa11.11□□□□□ -0.63
MSH5-205ENST00000395853 ST20-MTHFSA0A0A6YYL1 179 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 IGSF3O75054 1194 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 RBM6P78332 1123 aaKnown RBP11.1□□□□□ -0.63
MSH5-205ENST00000395853 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 CFAP44Q96MT7 982 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 MST1RQ04912 1400 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 PRAG1Q86YV5 1406 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 PTPRUQ92729 1446 aa11.1□□□□□ -0.63
MSH5-205ENST00000395853 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
MSH5-205ENST00000395853 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
MSH5-205ENST00000395853 CEP120Q8N960 986 aa11.09□□□□□ -0.63
MSH5-205ENST00000395853 ZBTB9Q96C00 473 aa11.09□□□□□ -0.63
MSH5-205ENST00000395853 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
MSH5-205ENST00000395853 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
MSH5-205ENST00000395853 BECN1Q14457 450 aa11.09□□□□□ -0.63
MSH5-205ENST00000395853 ZNF771Q7L3S4 317 aaPredicted RBP11.09□□□□□ -0.63
MSH5-205ENST00000395853 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
MSH5-205ENST00000395853 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
MSH5-205ENST00000395853 TSPYL1Q9H0U9 437 aa11.08□□□□□ -0.64
MSH5-205ENST00000395853 CCDC66A2RUB6 948 aa11.08□□□□□ -0.64
MSH5-205ENST00000395853 FAM9BQ8IZU0 186 aa11.08□□□□□ -0.64
MSH5-205ENST00000395853 RGS12O14924 1447 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 LAMC1P11047 1609 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 NUTM2BA6NNL0 878 aaPredicted RBP11.07□□□□□ -0.64
MSH5-205ENST00000395853 NUTM2EB1AL46 878 aaPredicted RBP11.07□□□□□ -0.64
MSH5-205ENST00000395853 NUTM2AQ8IVF1 878 aaPredicted RBP11.07□□□□□ -0.64
MSH5-205ENST00000395853 BANK1Q8NDB2 785 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 NRXN3Q9Y4C0 1643 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 PNPLA6Q8IY17 1366 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 LOC102724159A0A0B4J2E5 919 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 PWP2Q15269 919 aaKnown RBP11.07□□□□□ -0.64
MSH5-205ENST00000395853 NGLY1Q96IV0 654 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 TIGD1Q96MW7 591 aa11.07□□□□□ -0.64
MSH5-205ENST00000395853 QTRT2Q9H974 415 aaKnown RBP11.07□□□□□ -0.64
MSH5-205ENST00000395853 ADGRL3Q9HAR2 1447 aa11.06□□□□□ -0.64
MSH5-205ENST00000395853 LMOD3Q0VAK6 560 aa11.06□□□□□ -0.64
MSH5-205ENST00000395853 CCDC173Q0VFZ6 552 aa11.06□□□□□ -0.64
MSH5-205ENST00000395853 SASS6Q6UVJ0 657 aa11.06□□□□□ -0.64
MSH5-205ENST00000395853 CSPP1Q1MSJ5 1256 aa11.05□□□□□ -0.64
MSH5-205ENST00000395853 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
MSH5-205ENST00000395853 EFCC1Q9HA90 598 aa11.05□□□□□ -0.64
MSH5-205ENST00000395853 ATAD2Q6PL18 1390 aa11.05□□□□□ -0.64
MSH5-205ENST00000395853 SPHKAPQ2M3C7 1700 aa11.04□□□□□ -0.64
MSH5-205ENST00000395853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
MSH5-205ENST00000395853 TULP2O00295 520 aa11.04□□□□□ -0.64
MSH5-205ENST00000395853 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
MSH5-205ENST00000395853 EP400NLQ6ZTU2 488 aa11.04□□□□□ -0.64
MSH5-205ENST00000395853 MRS2Q9HD23 443 aa11.04□□□□□ -0.64
MSH5-205ENST00000395853 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
MSH5-205ENST00000395853 ZNF500O60304 480 aaPredicted RBP11.04□□□□□ -0.64
MSH5-205ENST00000395853 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
MSH5-205ENST00000395853 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
MSH5-205ENST00000395853 TRAK2O60296 914 aa11.03□□□□□ -0.64
MSH5-205ENST00000395853 NUTM2DQ5VT03 806 aaPredicted RBP11.03□□□□□ -0.64
MSH5-205ENST00000395853 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
MSH5-205ENST00000395853 HSP90AB3PQ58FF7 597 aa11.03□□□□□ -0.64
MSH5-205ENST00000395853 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
MSH5-205ENST00000395853 PPP1R9BQ96SB3 815 aa11.03□□□□□ -0.64
MSH5-205ENST00000395853 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
MSH5-205ENST00000395853 CLTCL1P53675 1640 aa11.02□□□□□ -0.64
MSH5-205ENST00000395853 CAPN2P17655 700 aa11.02□□□□□ -0.64
MSH5-205ENST00000395853 MCM4P33991 863 aa11.02□□□□□ -0.64
MSH5-205ENST00000395853 EXOC6Q8TAG9 804 aa11.02□□□□□ -0.64
MSH5-205ENST00000395853 GPRASP1Q5JY77 1395 aa11.02□□□□□ -0.65
MSH5-205ENST00000395853 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
MSH5-205ENST00000395853 SOS2Q07890 1332 aaPredicted RBP11.01□□□□□ -0.65
MSH5-205ENST00000395853 TRPC5Q9UL62 973 aaPredicted RBP11.01□□□□□ -0.65
MSH5-205ENST00000395853 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
MSH5-205ENST00000395853 NALCNQ8IZF0 1738 aa11.01□□□□□ -0.65
MSH5-205ENST00000395853 METP08581 1390 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms