RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 ADGRF5Q8IZF2 1346 aa6.34□□□□□ -1.39
FGD4-201ENST00000395740 PTCH1Q13635 1447 aa6.34□□□□□ -1.39
FGD4-201ENST00000395740 HSP90AA2PQ14568 343 aaPredicted RBP6.33□□□□□ -1.4
FGD4-201ENST00000395740 PLEKHF1Q96S99 279 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 STAG3Q9UJ98 1225 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 EVC2Q86UK5 1308 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 MLH3Q9UHC1 1453 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 GOLGA6L22H0YM25 854 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 GGT6Q6P531 493 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 NEXMIFQ5QGS0 1516 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 LTBP4Q8N2S1 1624 aa6.33□□□□□ -1.4
FGD4-201ENST00000395740 MCM5P33992 734 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 MTHFSP49914 203 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 ZNF445P59923 1031 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 KLHL40Q2TBA0 621 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 PDCL3Q9H2J4 239 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 TRIM27P14373 513 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 CALD1Q05682 793 aaKnown RBP6.32□□□□□ -1.4
FGD4-201ENST00000395740 TRIM44Q96DX7 344 aaPredicted RBP6.32□□□□□ -1.4
FGD4-201ENST00000395740 ATAD2Q6PL18 1390 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 TMPOP42166 694 aaKnown RBP6.32□□□□□ -1.4
FGD4-201ENST00000395740 NUCB2P80303 420 aa6.32□□□□□ -1.4
FGD4-201ENST00000395740 MTERF4Q7Z6M4 381 aaKnown RBP6.32□□□□□ -1.4
FGD4-201ENST00000395740 TNPO1Q92973 898 aaKnown RBP6.32□□□□□ -1.4
FGD4-201ENST00000395740 CWC22Q9HCG8 908 aaKnown RBP6.32□□□□□ -1.4
FGD4-201ENST00000395740 K7ELQ4 463 aaPredicted RBP6.31□□□□□ -1.4
FGD4-201ENST00000395740 CHD1LQ86WJ1 897 aa6.31□□□□□ -1.4
FGD4-201ENST00000395740 NAP1L5Q96NT1 182 aaPredicted RBP6.31□□□□□ -1.4
FGD4-201ENST00000395740 OFD1O75665 1012 aa6.31□□□□□ -1.4
FGD4-201ENST00000395740 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
FGD4-201ENST00000395740 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.31□□□□□ -1.4
FGD4-201ENST00000395740 ZSCAN30Q86W11 494 aa6.31□□□□□ -1.4
FGD4-201ENST00000395740 ANP32BQ92688 251 aaKnown RBP6.31□□□□□ -1.4
FGD4-201ENST00000395740 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
FGD4-201ENST00000395740 TRIM35Q9UPQ4 493 aa6.31□□□□□ -1.4
FGD4-201ENST00000395740 CAPN15O75808 1086 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 SSH1Q8WYL5 1049 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 KIF2CQ99661 725 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 NPATQ14207 1427 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 POGZQ7Z3K3 1410 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 ZNF500O60304 480 aaPredicted RBP6.3□□□□□ -1.4
FGD4-201ENST00000395740 FCHSD2O94868 740 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 EXOSC9Q06265 439 aaKnown RBP6.3□□□□□ -1.4
FGD4-201ENST00000395740 RABEP1Q15276 862 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 PANK2Q9BZ23 570 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 DLC1Q96QB1 1528 aa6.3□□□□□ -1.4
FGD4-201ENST00000395740 FAM135BQ49AJ0 1406 aa6.29□□□□□ -1.4
FGD4-201ENST00000395740 VGFO15240 615 aaPredicted RBP6.29□□□□□ -1.4
FGD4-201ENST00000395740 CYP2E1P05181 493 aaPredicted RBP6.29□□□□□ -1.4
FGD4-201ENST00000395740 HSP90AB1P08238 724 aaKnown RBP6.29□□□□□ -1.4
FGD4-201ENST00000395740 PDLIM2Q96JY6 352 aa6.29□□□□□ -1.4
FGD4-201ENST00000395740 SLC12A5Q9H2X9 1139 aa6.29□□□□□ -1.4
FGD4-201ENST00000395740 CSPP1Q1MSJ5 1256 aa6.29□□□□□ -1.4
FGD4-201ENST00000395740 TNNQ9UQP3 1299 aa6.29□□□□□ -1.4
FGD4-201ENST00000395740 SIGLEC1Q9BZZ2 1709 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 DLG5Q8TDM6 1919 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
FGD4-201ENST00000395740 EPB41L2O43491 1005 aaKnown RBP6.28□□□□□ -1.4
FGD4-201ENST00000395740 CDC45O75419 566 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 U2AF1L5P0DN76 240 aaPredicted RBP6.28□□□□□ -1.4
FGD4-201ENST00000395740 U2AF1Q01081 240 aaKnown RBP eCLIP6.28□□□□□ -1.4
FGD4-201ENST00000395740 TMEM57Q8N5G2 664 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 NOB1Q9ULX3 412 aaKnown RBP6.28□□□□□ -1.4
FGD4-201ENST00000395740 CPSF1Q10570 1443 aaKnown RBP6.28□□□□□ -1.4
FGD4-201ENST00000395740 TUBGCP6Q96RT7 1819 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 ATP7BP35670 1465 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 ABCC4O15439 1325 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 ECM2O94769 699 aaPredicted RBP6.28□□□□□ -1.4
FGD4-201ENST00000395740 ITPRIPQ8IWB1 547 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 TERF2IPQ9NYB0 399 aa6.28□□□□□ -1.4
FGD4-201ENST00000395740 MAP2P11137 1827 aaKnown RBP6.28□□□□□ -1.4
FGD4-201ENST00000395740 IL17RAQ96F46 866 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 TAOK2Q9UL54 1235 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 NOL7Q9UMY1 257 aaKnown RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 LRRC7Q96NW7 1537 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 CACNA1FO60840 1977 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 PTPRMP28827 1452 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 CD163L1Q9NR16 1453 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 N4BP2Q86UW6 1770 aaPredicted RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 BAG4O95429 457 aaKnown RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 CHGAP10645 457 aaKnown RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 NASPP49321 788 aaPredicted RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 NUTM2DQ5VT03 806 aaPredicted RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 GAS2L3Q86XJ1 694 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 API5Q9BZZ5 524 aaKnown RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 IFT57Q9NWB7 429 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 RRP7AQ9Y3A4 280 aaKnown RBP6.27□□□□□ -1.41
FGD4-201ENST00000395740 ERBB4Q15303 1308 aa6.27□□□□□ -1.41
FGD4-201ENST00000395740 TMEM131LA2VDJ0 1609 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 DIAPH1O60610 1272 aaKnown RBP6.26□□□□□ -1.41
FGD4-201ENST00000395740 ZNF853P0CG23 659 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 MCM2P49736 904 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 GNAI1P63096 354 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 NEUROD2Q15784 382 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 MRPL50Q8N5N7 158 aaKnown RBP6.26□□□□□ -1.41
FGD4-201ENST00000395740 SSUH2Q9Y2M2 353 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 A0A1W2PP64 1363 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 CDK12Q9NYV4 1490 aaPredicted RBP6.26□□□□□ -1.41
FGD4-201ENST00000395740 TSPOAP1O95153 1857 aa6.26□□□□□ -1.41
FGD4-201ENST00000395740 MSNP26038 577 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms