RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
PTPN20-207ENST00000395725 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPN20-207ENST00000395725 RGPD1P0DJD0 1748 aa16.15■□□□□ 0.18
PTPN20-207ENST00000395725 CCDC7Q96M83 1385 aa16.14■□□□□ 0.17
PTPN20-207ENST00000395725 LARP1Q6PKG0 1096 aaKnown RBP16.14■□□□□ 0.17
PTPN20-207ENST00000395725 WNK3Q9BYP7 1800 aa16.13■□□□□ 0.17
PTPN20-207ENST00000395725 NME9Q86XW9 330 aa16.13■□□□□ 0.17
PTPN20-207ENST00000395725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
PTPN20-207ENST00000395725 CARD10Q9BWT7 1032 aa16.13■□□□□ 0.17
PTPN20-207ENST00000395725 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
PTPN20-207ENST00000395725 FAM208AQ9UK61 1670 aaKnown RBP16.12■□□□□ 0.17
PTPN20-207ENST00000395725 DISP2A7MBM2 1401 aa16.12■□□□□ 0.17
PTPN20-207ENST00000395725 FAM196AQ6ZSG2 479 aa16.12■□□□□ 0.17
PTPN20-207ENST00000395725 COG3Q96JB2 828 aa16.12■□□□□ 0.17
PTPN20-207ENST00000395725 LTN1O94822 1766 aa16.12■□□□□ 0.17
PTPN20-207ENST00000395725 MYOM1P52179 1685 aa16.12■□□□□ 0.17
PTPN20-207ENST00000395725 KIF24Q5T7B8 1368 aa16.12■□□□□ 0.17
PTPN20-207ENST00000395725 RTL1A6NKG5 1358 aa16.11■□□□□ 0.17
PTPN20-207ENST00000395725 BCL9O00512 1426 aa16.1■□□□□ 0.17
PTPN20-207ENST00000395725 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
PTPN20-207ENST00000395725 A0A0G2JS52 829 aa16.1■□□□□ 0.17
PTPN20-207ENST00000395725 MYT1Q01538 1121 aa16.1■□□□□ 0.17
PTPN20-207ENST00000395725 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
PTPN20-207ENST00000395725 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
PTPN20-207ENST00000395725 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
PTPN20-207ENST00000395725 IP6K1Q92551 441 aa16.09■□□□□ 0.17
PTPN20-207ENST00000395725 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
PTPN20-207ENST00000395725 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
PTPN20-207ENST00000395725 BAG6P46379 1132 aa16.07■□□□□ 0.16
PTPN20-207ENST00000395725 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
PTPN20-207ENST00000395725 ERBB3P21860 1342 aa16.06■□□□□ 0.16
PTPN20-207ENST00000395725 FYB1O15117 783 aa16.06■□□□□ 0.16
PTPN20-207ENST00000395725 LRRC37A3O60309 1634 aa16.06■□□□□ 0.16
PTPN20-207ENST00000395725 HSPA5P11021 654 aaKnown RBP16.06■□□□□ 0.16
PTPN20-207ENST00000395725 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
PTPN20-207ENST00000395725 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
PTPN20-207ENST00000395725 ZBTB7CA1YPR0 619 aa16.04■□□□□ 0.16
PTPN20-207ENST00000395725 CSB-PGBD3P0DP91 1061 aa16.04■□□□□ 0.16
PTPN20-207ENST00000395725 OVOS2A0A0G2JMS6 1433 aa16.04■□□□□ 0.16
PTPN20-207ENST00000395725 CGNL1Q0VF96 1302 aa16.03■□□□□ 0.16
PTPN20-207ENST00000395725 RGPD3A6NKT7 1758 aaPredicted RBP16.03■□□□□ 0.16
PTPN20-207ENST00000395725 RGPD4Q7Z3J3 1758 aa16.03■□□□□ 0.16
PTPN20-207ENST00000395725 DDB1Q16531 1140 aa16.03■□□□□ 0.16
PTPN20-207ENST00000395725 USP35Q9P2H5 1018 aa16.03■□□□□ 0.16
PTPN20-207ENST00000395725 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.16
PTPN20-207ENST00000395725 NSD2O96028 1365 aa16.02■□□□□ 0.16
PTPN20-207ENST00000395725 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.15
PTPN20-207ENST00000395725 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.15
PTPN20-207ENST00000395725 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
PTPN20-207ENST00000395725 MAP3K19Q56UN5 1328 aa16.01■□□□□ 0.15
PTPN20-207ENST00000395725 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
PTPN20-207ENST00000395725 SOX12O15370 315 aa16■□□□□ 0.15
PTPN20-207ENST00000395725 EXOC5O00471 708 aa16■□□□□ 0.15
PTPN20-207ENST00000395725 HOXC9P31274 260 aa16■□□□□ 0.15
PTPN20-207ENST00000395725 AMPHP49418 695 aa15.99■□□□□ 0.15
PTPN20-207ENST00000395725 INSRP06213 1382 aa15.99■□□□□ 0.15
PTPN20-207ENST00000395725 SBF2Q86WG5 1849 aa15.99■□□□□ 0.15
PTPN20-207ENST00000395725 FLT4P35916 1363 aa15.98■□□□□ 0.15
PTPN20-207ENST00000395725 PLEKHG2Q9H7P9 1386 aa15.98■□□□□ 0.15
PTPN20-207ENST00000395725 IL2RBP14784 551 aa15.98■□□□□ 0.15
PTPN20-207ENST00000395725 SMG6Q86US8 1419 aaKnown RBP15.98■□□□□ 0.15
PTPN20-207ENST00000395725 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
PTPN20-207ENST00000395725 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
PTPN20-207ENST00000395725 RREB1Q92766 1687 aa15.96■□□□□ 0.15
PTPN20-207ENST00000395725 PLSCR1O15162 318 aa15.95■□□□□ 0.14
PTPN20-207ENST00000395725 CAMKK2Q96RR4 588 aa15.95■□□□□ 0.14
PTPN20-207ENST00000395725 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
PTPN20-207ENST00000395725 DEFB132Q7Z7B7 95 aa15.95■□□□□ 0.14
PTPN20-207ENST00000395725 TRIM37O94972 964 aa15.94■□□□□ 0.14
PTPN20-207ENST00000395725 MARCH10Q8NA82 808 aaPredicted RBP15.94■□□□□ 0.14
PTPN20-207ENST00000395725 NCAPD2Q15021 1401 aa15.93■□□□□ 0.14
PTPN20-207ENST00000395725 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
PTPN20-207ENST00000395725 APBA3O96018 575 aa15.92■□□□□ 0.14
PTPN20-207ENST00000395725 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
PTPN20-207ENST00000395725 PANK3Q9H999 370 aa15.92■□□□□ 0.14
PTPN20-207ENST00000395725 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
PTPN20-207ENST00000395725 EN1Q05925 392 aaPredicted RBP15.91■□□□□ 0.14
PTPN20-207ENST00000395725 FAM182BQ5T319 152 aa15.91■□□□□ 0.14
PTPN20-207ENST00000395725 RRS1Q15050 365 aaKnown RBP15.9■□□□□ 0.14
PTPN20-207ENST00000395725 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
PTPN20-207ENST00000395725 NPC1L1Q9UHC9 1359 aa15.89■□□□□ 0.13
PTPN20-207ENST00000395725 NUP188Q5SRE5 1749 aa15.89■□□□□ 0.13
PTPN20-207ENST00000395725 HMGB2P26583 209 aaKnown RBP15.88■□□□□ 0.13
PTPN20-207ENST00000395725 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
PTPN20-207ENST00000395725 LRP5O75197 1615 aa15.88■□□□□ 0.13
PTPN20-207ENST00000395725 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
PTPN20-207ENST00000395725 RGPD2P0DJD1 1756 aa15.88■□□□□ 0.13
PTPN20-207ENST00000395725 EZH2Q15910 746 aaKnown RBP15.87■□□□□ 0.13
PTPN20-207ENST00000395725 POLR3GLQ9BT43 218 aa15.87■□□□□ 0.13
PTPN20-207ENST00000395725 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
PTPN20-207ENST00000395725 LTV1Q96GA3 475 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-207ENST00000395725 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
PTPN20-207ENST00000395725 TATP17735 454 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-207ENST00000395725 HSP90AB2PQ58FF8 381 aa15.86■□□□□ 0.13
PTPN20-207ENST00000395725 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
PTPN20-207ENST00000395725 RAPGEF4Q8WZA2 1011 aa15.86■□□□□ 0.13
PTPN20-207ENST00000395725 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
PTPN20-207ENST00000395725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTPN20-207ENST00000395725 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
PTPN20-207ENST00000395725 FBLN1P23142 703 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms