RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
VPS26A-203ENST00000395098 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
VPS26A-203ENST00000395098 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
VPS26A-203ENST00000395098 NHSL1Q5SYE7 1610 aa17.35■□□□□ 0.37
VPS26A-203ENST00000395098 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
VPS26A-203ENST00000395098 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
VPS26A-203ENST00000395098 LTN1O94822 1766 aa17.35■□□□□ 0.37
VPS26A-203ENST00000395098 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
VPS26A-203ENST00000395098 IP6K1Q92551 441 aa17.35■□□□□ 0.37
VPS26A-203ENST00000395098 ARHGEF10O15013 1369 aa17.34■□□□□ 0.37
VPS26A-203ENST00000395098 ROBO1Q9Y6N7 1651 aa17.34■□□□□ 0.37
VPS26A-203ENST00000395098 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
VPS26A-203ENST00000395098 ZC3H6P61129 1189 aaKnown RBP17.34■□□□□ 0.37
VPS26A-203ENST00000395098 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.36
VPS26A-203ENST00000395098 LTV1Q96GA3 475 aaPredicted RBP17.33■□□□□ 0.36
VPS26A-203ENST00000395098 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
VPS26A-203ENST00000395098 SULT6B1Q6IMI4 303 aa17.32■□□□□ 0.36
VPS26A-203ENST00000395098 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
VPS26A-203ENST00000395098 EYA1Q99502 592 aa17.32■□□□□ 0.36
VPS26A-203ENST00000395098 CRYBG1Q9Y4K1 1723 aa17.31■□□□□ 0.36
VPS26A-203ENST00000395098 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
VPS26A-203ENST00000395098 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
VPS26A-203ENST00000395098 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
VPS26A-203ENST00000395098 PDE3BQ13370 1112 aa17.3■□□□□ 0.36
VPS26A-203ENST00000395098 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
VPS26A-203ENST00000395098 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
VPS26A-203ENST00000395098 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
VPS26A-203ENST00000395098 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
VPS26A-203ENST00000395098 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-203ENST00000395098 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
VPS26A-203ENST00000395098 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
VPS26A-203ENST00000395098 AHDC1Q5TGY3 1603 aaPredicted RBP17.27■□□□□ 0.36
VPS26A-203ENST00000395098 TOM1O60784 492 aa17.27■□□□□ 0.36
VPS26A-203ENST00000395098 GOLGA2Q08379 1002 aa17.27■□□□□ 0.36
VPS26A-203ENST00000395098 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.35
VPS26A-203ENST00000395098 KDRP35968 1356 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 CCDC27Q2M243 656 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 RIPK4P57078 832 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 LRRC59Q96AG4 307 aaKnown RBP17.26■□□□□ 0.35
VPS26A-203ENST00000395098 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
VPS26A-203ENST00000395098 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
VPS26A-203ENST00000395098 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
VPS26A-203ENST00000395098 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
VPS26A-203ENST00000395098 ANKRD24Q8TF21 1146 aa17.25■□□□□ 0.35
VPS26A-203ENST00000395098 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
VPS26A-203ENST00000395098 NFE2L2Q16236 605 aa17.24■□□□□ 0.35
VPS26A-203ENST00000395098 CPDO75976 1380 aa17.24■□□□□ 0.35
VPS26A-203ENST00000395098 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
VPS26A-203ENST00000395098 COL18A1P39060 1754 aa17.23■□□□□ 0.35
VPS26A-203ENST00000395098 NEFMP07197 916 aa17.23■□□□□ 0.35
VPS26A-203ENST00000395098 TRMT2AQ8IZ69 625 aaKnown RBP17.23■□□□□ 0.35
VPS26A-203ENST00000395098 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
VPS26A-203ENST00000395098 ERBB3P21860 1342 aa17.22■□□□□ 0.35
VPS26A-203ENST00000395098 ABCA3Q99758 1704 aa17.22■□□□□ 0.35
VPS26A-203ENST00000395098 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
VPS26A-203ENST00000395098 RGPD5Q99666 1765 aa17.21■□□□□ 0.35
VPS26A-203ENST00000395098 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-203ENST00000395098 WDR63Q8IWG1 891 aa17.21■□□□□ 0.35
VPS26A-203ENST00000395098 RGPD2P0DJD1 1756 aa17.2■□□□□ 0.34
VPS26A-203ENST00000395098 COL16A1Q07092 1604 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-203ENST00000395098 E9PSI1 815 aa17.2■□□□□ 0.34
VPS26A-203ENST00000395098 PRDM11Q9NQV5 511 aa17.2■□□□□ 0.34
VPS26A-203ENST00000395098 PHLPP1O60346 1717 aa17.19■□□□□ 0.34
VPS26A-203ENST00000395098 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
VPS26A-203ENST00000395098 THUMPD2Q9BTF0 503 aaKnown RBP17.19■□□□□ 0.34
VPS26A-203ENST00000395098 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
VPS26A-203ENST00000395098 NCAPD2Q15021 1401 aa17.18■□□□□ 0.34
VPS26A-203ENST00000395098 ABCC6O95255 1503 aa17.17■□□□□ 0.34
VPS26A-203ENST00000395098 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
VPS26A-203ENST00000395098 DCTN1Q14203 1278 aa17.16■□□□□ 0.34
VPS26A-203ENST00000395098 COL22A1Q8NFW1 1626 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-203ENST00000395098 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
VPS26A-203ENST00000395098 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
VPS26A-203ENST00000395098 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
VPS26A-203ENST00000395098 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
VPS26A-203ENST00000395098 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
VPS26A-203ENST00000395098 RCAN3Q9UKA8 241 aa17.14■□□□□ 0.33
VPS26A-203ENST00000395098 MCM10Q7L590 875 aa17.13■□□□□ 0.33
VPS26A-203ENST00000395098 IL16Q14005 1332 aa17.12■□□□□ 0.33
VPS26A-203ENST00000395098 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
VPS26A-203ENST00000395098 LMOD3Q0VAK6 560 aa17.12■□□□□ 0.33
VPS26A-203ENST00000395098 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
VPS26A-203ENST00000395098 FANCIQ9NVI1 1328 aa17.11■□□□□ 0.33
VPS26A-203ENST00000395098 FAM208AQ9UK61 1670 aaKnown RBP17.11■□□□□ 0.33
VPS26A-203ENST00000395098 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-203ENST00000395098 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
VPS26A-203ENST00000395098 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
VPS26A-203ENST00000395098 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
VPS26A-203ENST00000395098 LAS1LQ9Y4W2 734 aaKnown RBP17.09■□□□□ 0.33
VPS26A-203ENST00000395098 FKBP8Q14318 412 aa17.09■□□□□ 0.33
VPS26A-203ENST00000395098 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
VPS26A-203ENST00000395098 ZNF853P0CG23 659 aa17.08■□□□□ 0.33
VPS26A-203ENST00000395098 BTG4Q9NY30 223 aa17.08■□□□□ 0.33
VPS26A-203ENST00000395098 ADAMTS2O95450 1211 aa17.08■□□□□ 0.32
VPS26A-203ENST00000395098 LARP1Q6PKG0 1096 aaKnown RBP17.08■□□□□ 0.32
VPS26A-203ENST00000395098 MEGF6O75095 1541 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms