RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 RRS1Q15050 365 aaKnown RBP16.35■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 ABCC6O95255 1503 aa16.35■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 LTN1O94822 1766 aa16.34■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 PPM1GO15355 546 aaPredicted RBP16.34■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 PPP2R1AP30153 589 aa16.34■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
GTF2IRD2B-201ENST00000394939 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 FLT4P35916 1363 aa16.33■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 FBLN1P23142 703 aa16.32■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 MTHFSP49914 203 aa16.32■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 COL14A1Q05707 1796 aaKnown RBP16.32■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 IP6K1Q92551 441 aa16.31■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 LRP6O75581 1613 aa16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 CDK12Q9NYV4 1490 aaPredicted RBP16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 BLMP54132 1417 aaPredicted RBP16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 HOXC9P31274 260 aa16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 CHRNA2Q15822 529 aa16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 C8orf37Q96NL8 207 aa16.3■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 INSRP06213 1382 aa16.28■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 EVA1CP58658 441 aa16.27■□□□□ 0.2
GTF2IRD2B-201ENST00000394939 COL18A1P39060 1754 aa16.26■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 PEAK1Q9H792 1746 aa16.26■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 NWD2Q9ULI1 1742 aa16.26■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 LMO7Q8WWI1 1683 aa16.26■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 PLCH1Q4KWH8 1693 aa16.25■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 CSB-PGBD3P0DP91 1061 aa16.25■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 SLIT2O94813 1529 aa16.24■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 DIAPH1O60610 1272 aaKnown RBP16.24■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 AXIN2Q9Y2T1 843 aa16.24■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 COL5A2P05997 1499 aaPredicted RBP16.23■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 ERBB3P21860 1342 aa16.23■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 AFF2P51816 1311 aa16.22■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 STRN4Q9NRL3 753 aa16.22■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 USP21Q9UK80 565 aa16.22■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 MIER1Q8N108 512 aa16.21■□□□□ 0.19
GTF2IRD2B-201ENST00000394939 ZNF772Q68DY9 489 aaPredicted RBP16.2■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 TOM1L2Q6ZVM7 507 aa16.2■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 NLRP2Q9NX02 1062 aa16.2■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 NRAPQ86VF7 1730 aa16.19■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.19■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 IL13P35225 146 aa16.19■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 WDR43Q15061 677 aaKnown RBP eCLIP16.19■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 CRB1P82279 1406 aa16.19■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 BCL9LQ86UU0 1499 aa16.18■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 U2SURPO15042 1029 aaKnown RBP16.18■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 LARP1Q6PKG0 1096 aaKnown RBP16.18■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 TRPC5Q9UL62 973 aaPredicted RBP16.18■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 CCDC9Q9Y3X0 531 aaKnown RBP16.18■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 VPS72Q15906 364 aa16.17■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 CARD10Q9BWT7 1032 aa16.17■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 EYA1Q99502 592 aa16.15■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 PNNQ9H307 717 aaKnown RBP16.15■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 THRAP3Q9Y2W1 955 aaKnown RBP16.15■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
GTF2IRD2B-201ENST00000394939 NBPF6Q5VWK0 638 aa16.14■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 NBPF4Q96M43 638 aa16.14■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 ATRNO75882 1429 aa16.13■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 SULT6B1Q6IMI4 303 aa16.13■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 QTRT2Q9H974 415 aaKnown RBP16.13■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 NEFMP07197 916 aa16.12■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 RAPGEF4Q8WZA2 1011 aa16.12■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 CDCA7Q9BWT1 371 aaPredicted RBP16.12■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 RGPD2P0DJD1 1756 aa16.11■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 FCHSD2O94868 740 aa16.11■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 KDRP35968 1356 aa16.11■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms