RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SPATA31A5Q5VU36 1347 aa26.09■■□□□ 1.77
PDLIM7-204ENST00000393546 SPATA31A7Q8IWB4 1347 aa26.09■■□□□ 1.77
PDLIM7-204ENST00000393546 COL18A1P39060 1754 aa26.07■■□□□ 1.76
PDLIM7-204ENST00000393546 GLI3P10071 1580 aa26.07■■□□□ 1.76
PDLIM7-204ENST00000393546 FBLN1P23142 703 aa26.06■■□□□ 1.76
PDLIM7-204ENST00000393546 LARP1Q6PKG0 1096 aaKnown RBP26.06■■□□□ 1.76
PDLIM7-204ENST00000393546 COL5A2P05997 1499 aaPredicted RBP26.05■■□□□ 1.76
PDLIM7-204ENST00000393546 SPATA31A1Q5TZJ5 1347 aa26.05■■□□□ 1.76
PDLIM7-204ENST00000393546 RGS12O14924 1447 aa26.05■■□□□ 1.76
PDLIM7-204ENST00000393546 ONECUT3O60422 494 aaPredicted RBP26.04■■□□□ 1.76
PDLIM7-204ENST00000393546 LTN1O94822 1766 aa26.03■■□□□ 1.76
PDLIM7-204ENST00000393546 AMPHP49418 695 aa26.03■■□□□ 1.76
PDLIM7-204ENST00000393546 FAM98CQ17RN3 349 aaKnown RBP26.03■■□□□ 1.76
PDLIM7-204ENST00000393546 IP6K1Q92551 441 aa26.03■■□□□ 1.76
PDLIM7-204ENST00000393546 MAP3K19Q56UN5 1328 aa26.03■■□□□ 1.76
PDLIM7-204ENST00000393546 ABCC6O95255 1503 aa26.03■■□□□ 1.76
PDLIM7-204ENST00000393546 CSB-PGBD3P0DP91 1061 aa26.02■■□□□ 1.76
PDLIM7-204ENST00000393546 USP35Q9P2H5 1018 aa26.02■■□□□ 1.76
PDLIM7-204ENST00000393546 RRS1Q15050 365 aaKnown RBP26.01■■□□□ 1.75
PDLIM7-204ENST00000393546 TOM1L2Q6ZVM7 507 aa26.01■■□□□ 1.75
PDLIM7-204ENST00000393546 SEPT12Q8IYM1 358 aa26.01■■□□□ 1.75
PDLIM7-204ENST00000393546 WDR17Q8IZU2 1322 aa26.01■■□□□ 1.75
PDLIM7-204ENST00000393546 RGPD5Q99666 1765 aa26.01■■□□□ 1.75
PDLIM7-204ENST00000393546 NSD2O96028 1365 aa26■■□□□ 1.75
PDLIM7-204ENST00000393546 A0A0G2JS52 829 aa26■■□□□ 1.75
PDLIM7-204ENST00000393546 MYT1Q01538 1121 aa26■■□□□ 1.75
PDLIM7-204ENST00000393546 CRB1P82279 1406 aa25.99■■□□□ 1.75
PDLIM7-204ENST00000393546 PER1O15534 1290 aaPredicted RBP25.99■■□□□ 1.75
PDLIM7-204ENST00000393546 TCP11L2Q8N4U5 519 aa25.99■■□□□ 1.75
PDLIM7-204ENST00000393546 THRAP3Q9Y2W1 955 aaKnown RBP25.99■■□□□ 1.75
PDLIM7-204ENST00000393546 HOXC9P31274 260 aa25.97■■□□□ 1.75
PDLIM7-204ENST00000393546 BARGINQ6ZT62 677 aa25.97■■□□□ 1.75
PDLIM7-204ENST00000393546 MORC1Q86VD1 984 aa25.97■■□□□ 1.75
PDLIM7-204ENST00000393546 ANKRD24Q8TF21 1146 aa25.97■■□□□ 1.75
PDLIM7-204ENST00000393546 BLMP54132 1417 aaPredicted RBP25.97■■□□□ 1.75
PDLIM7-204ENST00000393546 AMER1Q5JTC6 1135 aaPredicted RBP25.96■■□□□ 1.75
PDLIM7-204ENST00000393546 CARD10Q9BWT7 1032 aa25.95■■□□□ 1.74
PDLIM7-204ENST00000393546 RTL1A6NKG5 1358 aa25.95■■□□□ 1.74
PDLIM7-204ENST00000393546 ERBB3P21860 1342 aa25.94■■□□□ 1.74
PDLIM7-204ENST00000393546 TNNT2P45379 298 aaPredicted RBP25.94■■□□□ 1.74
PDLIM7-204ENST00000393546 ANKRD26Q9UPS8 1709 aa25.94■■□□□ 1.74
PDLIM7-204ENST00000393546 LTV1Q96GA3 475 aaPredicted RBP25.93■■□□□ 1.74
PDLIM7-204ENST00000393546 NLRP2Q9NX02 1062 aa25.93■■□□□ 1.74
PDLIM7-204ENST00000393546 KIF24Q5T7B8 1368 aa25.93■■□□□ 1.74
PDLIM7-204ENST00000393546 EMILIN1Q9Y6C2 1016 aa25.92■■□□□ 1.74
PDLIM7-204ENST00000393546 PPM1GO15355 546 aaPredicted RBP25.91■■□□□ 1.74
PDLIM7-204ENST00000393546 KRT27Q7Z3Y8 459 aa25.9■■□□□ 1.74
PDLIM7-204ENST00000393546 POLKQ9UBT6 870 aa25.9■■□□□ 1.74
PDLIM7-204ENST00000393546 FLT4P35916 1363 aa25.9■■□□□ 1.74
PDLIM7-204ENST00000393546 MAP2P11137 1827 aaKnown RBP25.89■■□□□ 1.74
PDLIM7-204ENST00000393546 HSP90AB2PQ58FF8 381 aa25.88■■□□□ 1.73
PDLIM7-204ENST00000393546 CC2D1BQ5T0F9 858 aaKnown RBP25.88■■□□□ 1.73
PDLIM7-204ENST00000393546 BRWD3Q6RI45 1802 aa25.88■■□□□ 1.73
PDLIM7-204ENST00000393546 INSRP06213 1382 aa25.87■■□□□ 1.73
PDLIM7-204ENST00000393546 CDCA7Q9BWT1 371 aaPredicted RBP25.87■■□□□ 1.73
PDLIM7-204ENST00000393546 NPC1L1Q9UHC9 1359 aa25.86■■□□□ 1.73
PDLIM7-204ENST00000393546 THSD7AQ9UPZ6 1657 aa25.86■■□□□ 1.73
PDLIM7-204ENST00000393546 PDE3BQ13370 1112 aa25.84■■□□□ 1.73
PDLIM7-204ENST00000393546 CNGB1Q14028 1251 aaPredicted RBP25.84■■□□□ 1.73
PDLIM7-204ENST00000393546 SMG6Q86US8 1419 aaKnown RBP25.84■■□□□ 1.73
PDLIM7-204ENST00000393546 PEAK1Q9H792 1746 aa25.83■■□□□ 1.73
PDLIM7-204ENST00000393546 UPF1Q92900 1129 aaKnown RBP eCLIP25.82■■□□□ 1.72
PDLIM7-204ENST00000393546 FAM208AQ9UK61 1670 aaKnown RBP25.8■■□□□ 1.72
PDLIM7-204ENST00000393546 DDB1Q16531 1140 aa25.8■■□□□ 1.72
PDLIM7-204ENST00000393546 IL2RBP14784 551 aa25.79■■□□□ 1.72
PDLIM7-204ENST00000393546 EXOC5O00471 708 aa25.78■■□□□ 1.72
PDLIM7-204ENST00000393546 DDX10Q13206 875 aaKnown RBP25.78■■□□□ 1.72
PDLIM7-204ENST00000393546 NBPF6Q5VWK0 638 aa25.78■■□□□ 1.72
PDLIM7-204ENST00000393546 NBPF4Q96M43 638 aa25.78■■□□□ 1.72
PDLIM7-204ENST00000393546 PARP4Q9UKK3 1724 aaKnown RBP25.77■■□□□ 1.72
PDLIM7-204ENST00000393546 DISP2A7MBM2 1401 aa25.77■■□□□ 1.72
PDLIM7-204ENST00000393546 FAM182BQ5T319 152 aa25.76■■□□□ 1.71
PDLIM7-204ENST00000393546 WNK3Q9BYP7 1800 aa25.74■■□□□ 1.71
PDLIM7-204ENST00000393546 RGPD2P0DJD1 1756 aa25.74■■□□□ 1.71
PDLIM7-204ENST00000393546 FAM196AQ6ZSG2 479 aa25.74■■□□□ 1.71
PDLIM7-204ENST00000393546 CCDC125Q86Z20 511 aa25.74■■□□□ 1.71
PDLIM7-204ENST00000393546 MTHFSP49914 203 aa25.73■■□□□ 1.71
PDLIM7-204ENST00000393546 EIF4A2Q14240 407 aaKnown RBP25.73■■□□□ 1.71
PDLIM7-204ENST00000393546 USHBP1Q8N6Y0 703 aa25.73■■□□□ 1.71
PDLIM7-204ENST00000393546 RAPGEF4Q8WZA2 1011 aa25.7■■□□□ 1.7
PDLIM7-204ENST00000393546 EYA1Q99502 592 aa25.7■■□□□ 1.7
PDLIM7-204ENST00000393546 LRRC37A3O60309 1634 aa25.7■■□□□ 1.7
PDLIM7-204ENST00000393546 ZNF316A6NFI3 1004 aaPredicted RBP25.69■■□□□ 1.7
PDLIM7-204ENST00000393546 TATP17735 454 aaPredicted RBP25.68■■□□□ 1.7
PDLIM7-204ENST00000393546 SF3B2Q13435 895 aaKnown RBP25.68■■□□□ 1.7
PDLIM7-204ENST00000393546 MARCH10Q8NA82 808 aaPredicted RBP25.68■■□□□ 1.7
PDLIM7-204ENST00000393546 TNS2Q63HR2 1409 aa25.66■■□□□ 1.7
PDLIM7-204ENST00000393546 ZCRB1Q8TBF4 217 aaKnown RBP25.65■■□□□ 1.7
PDLIM7-204ENST00000393546 OVOS2A0A0G2JMS6 1433 aa25.64■■□□□ 1.7
PDLIM7-204ENST00000393546 EP400Q96L91 3159 aa25.64■■□□□ 1.7
PDLIM7-204ENST00000393546 IL13P35225 146 aa25.63■■□□□ 1.69
PDLIM7-204ENST00000393546 DDX54Q8TDD1 881 aaKnown RBP25.63■■□□□ 1.69
PDLIM7-204ENST00000393546 TRIM37O94972 964 aa25.62■■□□□ 1.69
PDLIM7-204ENST00000393546 PPP2R1AP30153 589 aa25.62■■□□□ 1.69
PDLIM7-204ENST00000393546 MEGF6O75095 1541 aa25.62■■□□□ 1.69
PDLIM7-204ENST00000393546 NCAPD2Q15021 1401 aa25.62■■□□□ 1.69
PDLIM7-204ENST00000393546 IGSF1Q8N6C5 1336 aa25.62■■□□□ 1.69
PDLIM7-204ENST00000393546 DIAPH1O60610 1272 aaKnown RBP25.61■■□□□ 1.69
PDLIM7-204ENST00000393546 CFAP53Q96M91 514 aa25.6■■□□□ 1.69
PDLIM7-204ENST00000393546 PARD3Q8TEW0 1356 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms