RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 Q6ZVU0 165 aa8.27□□□□□ -1.09
RNU6-1009P-201ENST00000390996 OCSTAMPQ9BR26 566 aa8.27□□□□□ -1.09
RNU6-1009P-201ENST00000390996 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
RNU6-1009P-201ENST00000390996 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
RNU6-1009P-201ENST00000390996 CBLBQ13191 982 aa8.25□□□□□ -1.09
RNU6-1009P-201ENST00000390996 SKIV2LQ15477 1246 aaKnown RBP8.25□□□□□ -1.09
RNU6-1009P-201ENST00000390996 SH3D19Q5HYK7 790 aa8.25□□□□□ -1.09
RNU6-1009P-201ENST00000390996 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
RNU6-1009P-201ENST00000390996 ARHGAP9Q9BRR9 750 aa8.25□□□□□ -1.09
RNU6-1009P-201ENST00000390996 TTLL8A6PVC2 850 aa8.24□□□□□ -1.09
RNU6-1009P-201ENST00000390996 NR6A1Q15406 480 aa8.24□□□□□ -1.09
RNU6-1009P-201ENST00000390996 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.24□□□□□ -1.09
RNU6-1009P-201ENST00000390996 PROCA1Q8NCQ7 364 aaPredicted RBP8.24□□□□□ -1.09
RNU6-1009P-201ENST00000390996 ZC3H4Q9UPT8 1303 aaKnown RBP8.24□□□□□ -1.09
RNU6-1009P-201ENST00000390996 SPINT1O43278 529 aa8.23□□□□□ -1.09
RNU6-1009P-201ENST00000390996 KRT76Q01546 638 aa8.23□□□□□ -1.09
RNU6-1009P-201ENST00000390996 KCTD15Q96SI1 283 aaPredicted RBP8.23□□□□□ -1.09
RNU6-1009P-201ENST00000390996 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
RNU6-1009P-201ENST00000390996 PTSQ03393 145 aa8.22□□□□□ -1.09
RNU6-1009P-201ENST00000390996 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
RNU6-1009P-201ENST00000390996 SLC10A4Q96EP9 437 aa8.22□□□□□ -1.09
RNU6-1009P-201ENST00000390996 KDM4CQ9H3R0 1056 aa8.22□□□□□ -1.09
RNU6-1009P-201ENST00000390996 GPBP1L1Q9HC44 474 aaPredicted RBP8.22□□□□□ -1.09
RNU6-1009P-201ENST00000390996 CDV3Q9UKY7 258 aaKnown RBP8.22□□□□□ -1.09
RNU6-1009P-201ENST00000390996 INTS6LQ5JSJ4 861 aaKnown RBP8.21□□□□□ -1.1
RNU6-1009P-201ENST00000390996 FAM117AQ9C073 453 aa8.21□□□□□ -1.1
RNU6-1009P-201ENST00000390996 GPSM3Q9Y4H4 160 aa8.2□□□□□ -1.1
RNU6-1009P-201ENST00000390996 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
RNU6-1009P-201ENST00000390996 GSK3AP49840 483 aa8.19□□□□□ -1.1
RNU6-1009P-201ENST00000390996 DHX9Q08211 1270 aaKnown RBP8.19□□□□□ -1.1
RNU6-1009P-201ENST00000390996 ZBTB33Q86T24 672 aa8.19□□□□□ -1.1
RNU6-1009P-201ENST00000390996 EPS8L1Q8TE68 723 aa8.19□□□□□ -1.1
RNU6-1009P-201ENST00000390996 NANOS1Q8WY41 292 aaKnown RBP8.19□□□□□ -1.1
RNU6-1009P-201ENST00000390996 PTK2Q05397 1052 aa8.18□□□□□ -1.1
RNU6-1009P-201ENST00000390996 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
RNU6-1009P-201ENST00000390996 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
RNU6-1009P-201ENST00000390996 DDRGK1Q96HY6 314 aa8.18□□□□□ -1.1
RNU6-1009P-201ENST00000390996 AGBL1Q96MI9 1066 aa8.18□□□□□ -1.1
RNU6-1009P-201ENST00000390996 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
RNU6-1009P-201ENST00000390996 AP1G2O75843 785 aa8.17□□□□□ -1.1
RNU6-1009P-201ENST00000390996 HMX1Q9NP08 348 aaPredicted RBP8.17□□□□□ -1.1
RNU6-1009P-201ENST00000390996 CTSOP43234 321 aaPredicted RBP8.16□□□□□ -1.1
RNU6-1009P-201ENST00000390996 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
RNU6-1009P-201ENST00000390996 CNTNAP3BQ96NU0 1288 aa8.15□□□□□ -1.1
RNU6-1009P-201ENST00000390996 INSM2Q96T92 566 aaPredicted RBP8.15□□□□□ -1.1
RNU6-1009P-201ENST00000390996 CNTNAP3Q9BZ76 1288 aa8.15□□□□□ -1.1
RNU6-1009P-201ENST00000390996 LILRA1O75019 489 aa8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 USP17L8P0C7I0 530 aa8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 RELBQ01201 579 aa8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 RNFT1Q5M7Z0 435 aa8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 KDF1Q8NAX2 398 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 RNF217Q8TC41 542 aa8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
RNU6-1009P-201ENST00000390996 SENP3-EIF4A1A0A087X0R7 540 aa8.13□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ESPNB1AK53 854 aa8.13□□□□□ -1.11
RNU6-1009P-201ENST00000390996 NBPF20Q3BBV1 942 aa8.13□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ITGA6P23229 1130 aa8.12□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ADD1P35611 737 aaKnown RBP8.12□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ZNF395Q9H8N7 513 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ADH1AP07327 375 aa8.11□□□□□ -1.11
RNU6-1009P-201ENST00000390996 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
RNU6-1009P-201ENST00000390996 TRIM34Q9BYJ4 488 aa8.11□□□□□ -1.11
RNU6-1009P-201ENST00000390996 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
RNU6-1009P-201ENST00000390996 SLURP2P0DP57 97 aa8.1□□□□□ -1.11
RNU6-1009P-201ENST00000390996 RFC5P40937 340 aa8.1□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ZNF385CQ66K41 422 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1009P-201ENST00000390996 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
RNU6-1009P-201ENST00000390996 PTGIRP43119 386 aa8.09□□□□□ -1.11
RNU6-1009P-201ENST00000390996 RAB15P59190 212 aa8.09□□□□□ -1.11
RNU6-1009P-201ENST00000390996 PNMA1Q8ND90 353 aa8.09□□□□□ -1.11
RNU6-1009P-201ENST00000390996 ADAMTS8Q9UP79 889 aa8.09□□□□□ -1.11
RNU6-1009P-201ENST00000390996 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
RNU6-1009P-201ENST00000390996 WHAMMQ8TF30 809 aa8.08□□□□□ -1.12
RNU6-1009P-201ENST00000390996 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1009P-201ENST00000390996 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
RNU6-1009P-201ENST00000390996 SV2AQ7L0J3 742 aa8.07□□□□□ -1.12
RNU6-1009P-201ENST00000390996 KRTAP4-6Q9BYQ5 205 aa8.07□□□□□ -1.12
RNU6-1009P-201ENST00000390996 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
RNU6-1009P-201ENST00000390996 CDC14CA4D256 554 aa8.06□□□□□ -1.12
RNU6-1009P-201ENST00000390996 ARHGEF15O94989 841 aa8.06□□□□□ -1.12
RNU6-1009P-201ENST00000390996 SEPT12Q8IYM1 358 aa8.06□□□□□ -1.12
RNU6-1009P-201ENST00000390996 RASSF7Q02833 373 aa8.05□□□□□ -1.12
RNU6-1009P-201ENST00000390996 KCTD17Q8N5Z5 321 aa8.05□□□□□ -1.12
RNU6-1009P-201ENST00000390996 CUEDC1Q9NWM3 386 aaPredicted RBP8.05□□□□□ -1.12
RNU6-1009P-201ENST00000390996 SVOPQ8N4V2 548 aa8.04□□□□□ -1.12
RNU6-1009P-201ENST00000390996 GJD4Q96KN9 370 aaPredicted RBP8.04□□□□□ -1.12
RNU6-1009P-201ENST00000390996 CYLDQ9NQC7 956 aa8.04□□□□□ -1.12
RNU6-1009P-201ENST00000390996 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
RNU6-1009P-201ENST00000390996 GAS6Q14393 721 aa8.03□□□□□ -1.12
RNU6-1009P-201ENST00000390996 TMEM259Q4ZIN3 620 aa8.03□□□□□ -1.12
RNU6-1009P-201ENST00000390996 LYSMD3Q7Z3D4 306 aa8.03□□□□□ -1.12
RNU6-1009P-201ENST00000390996 TMEM151AQ8N4L1 468 aa8.03□□□□□ -1.12
RNU6-1009P-201ENST00000390996 ZBBXA8MT70 800 aa8.02□□□□□ -1.13
RNU6-1009P-201ENST00000390996 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
RNU6-1009P-201ENST00000390996 GDF11O95390 407 aa8.02□□□□□ -1.13
RNU6-1009P-201ENST00000390996 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
RNU6-1009P-201ENST00000390996 RNF225M0QZC1 329 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms