RNA–Protein interactions for RNA: ENST00000388782.8

GKAP1-204, Transcript of G kinase anchoring protein 1, human

TSL 2

Gene GKAP1, Length 1,231 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GKAP1-204	ENST00000388782	CHRNA2	Q15822	529 aa		33.5	■■■□□ 2.95
GKAP1-204	ENST00000388782	ZNF772	Q68DY9	489 aa	Predicted RBP	33.5	■■■□□ 2.95
GKAP1-204	ENST00000388782	C8orf37	Q96NL8	207 aa		33.5	■■■□□ 2.95
GKAP1-204	ENST00000388782	FLT4	P35916	1363 aa		33.49	■■■□□ 2.95
GKAP1-204	ENST00000388782	NWD2	Q9ULI1	1742 aa		33.49	■■■□□ 2.95
GKAP1-204	ENST00000388782	PEAK1	Q9H792	1746 aa		33.48	■■■□□ 2.95
GKAP1-204	ENST00000388782	BLM	P54132	1417 aa	Predicted RBP	33.48	■■■□□ 2.95
GKAP1-204	ENST00000388782	EMILIN1	Q9Y6C2	1016 aa		33.48	■■■□□ 2.95
GKAP1-204	ENST00000388782	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.48	■■■□□ 2.95
GKAP1-204	ENST00000388782	IP6K1	Q92551	441 aa		33.47	■■■□□ 2.95
GKAP1-204	ENST00000388782	NGLY1	Q96IV0	654 aa		33.47	■■■□□ 2.95
GKAP1-204	ENST00000388782	SLIT2	O94813	1529 aa		33.47	■■■□□ 2.95
GKAP1-204	ENST00000388782	PPP2R1A	P30153	589 aa		33.46	■■■□□ 2.95
GKAP1-204	ENST00000388782	DIEXF	Q68CQ4	756 aa	Known RBP	33.46	■■■□□ 2.95
GKAP1-204	ENST00000388782	HOXC9	P31274	260 aa		33.45	■■■□□ 2.95
GKAP1-204	ENST00000388782	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.45	■■■□□ 2.95
GKAP1-204	ENST00000388782	PPM1G	O15355	546 aa	Predicted RBP	33.44	■■■□□ 2.94
GKAP1-204	ENST00000388782	CAMTA1	Q9Y6Y1	1673 aa		33.43	■■■□□ 2.94
GKAP1-204	ENST00000388782	MTHFS	P49914	203 aa		33.42	■■■□□ 2.94
GKAP1-204	ENST00000388782	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.42	■■■□□ 2.94
GKAP1-204	ENST00000388782	BTG4	Q9NY30	223 aa		33.41	■■■□□ 2.94
GKAP1-204	ENST00000388782	INSR	P06213	1382 aa		33.41	■■■□□ 2.94
GKAP1-204	ENST00000388782	NRAP	Q86VF7	1730 aa		33.41	■■■□□ 2.94
GKAP1-204	ENST00000388782	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.4	■■■□□ 2.94
GKAP1-204	ENST00000388782	COL5A2	P05997	1499 aa	Predicted RBP	33.4	■■■□□ 2.94
GKAP1-204	ENST00000388782	RGPD5	Q99666	1765 aa		33.39	■■■□□ 2.94
GKAP1-204	ENST00000388782	AFF2	P51816	1311 aa		33.39	■■■□□ 2.94
GKAP1-204	ENST00000388782	AXIN2	Q9Y2T1	843 aa		33.39	■■■□□ 2.94
GKAP1-204	ENST00000388782	BCL9L	Q86UU0	1499 aa		33.36	■■■□□ 2.93
GKAP1-204	ENST00000388782	ERBB3	P21860	1342 aa		33.35	■■■□□ 2.93
GKAP1-204	ENST00000388782	HSP90AB2P	Q58FF8	381 aa		33.35	■■■□□ 2.93
GKAP1-204	ENST00000388782	UNC5CL	Q8IV45	518 aa		33.35	■■■□□ 2.93
GKAP1-204	ENST00000388782	CFAP53	Q96M91	514 aa		33.35	■■■□□ 2.93
GKAP1-204	ENST00000388782	USP21	Q9UK80	565 aa		33.35	■■■□□ 2.93
GKAP1-204	ENST00000388782	FAM208A	Q9UK61	1670 aa	Known RBP	33.35	■■■□□ 2.93
GKAP1-204	ENST00000388782	EVA1C	P58658	441 aa		33.34	■■■□□ 2.93
GKAP1-204	ENST00000388782	ANKRD24	Q8TF21	1146 aa		33.33	■■■□□ 2.93
GKAP1-204	ENST00000388782	STRN4	Q9NRL3	753 aa		33.31	■■■□□ 2.92
GKAP1-204	ENST00000388782	WDR17	Q8IZU2	1322 aa		33.3	■■■□□ 2.92
GKAP1-204	ENST00000388782	RXRB	P28702	533 aa		33.3	■■■□□ 2.92
GKAP1-204	ENST00000388782	COL3A1	P02461	1466 aa	Predicted RBP	33.3	■■■□□ 2.92
GKAP1-204	ENST00000388782	CSB-PGBD3	P0DP91	1061 aa		33.29	■■■□□ 2.92
GKAP1-204	ENST00000388782	LTV1	Q96GA3	475 aa	Predicted RBP	33.28	■■■□□ 2.92
GKAP1-204	ENST00000388782	CRB1	P82279	1406 aa		33.27	■■■□□ 2.92
GKAP1-204	ENST00000388782	EIF4A2	Q14240	407 aa	Known RBP	33.25	■■■□□ 2.91
GKAP1-204	ENST00000388782	VPS72	Q15906	364 aa		33.25	■■■□□ 2.91
GKAP1-204	ENST00000388782	TRPC5	Q9UL62	973 aa	Predicted RBP	33.25	■■■□□ 2.91
GKAP1-204	ENST00000388782	ATRN	O75882	1429 aa		33.25	■■■□□ 2.91
GKAP1-204	ENST00000388782	DIAPH1	O60610	1272 aa	Known RBP	33.24	■■■□□ 2.91
GKAP1-204	ENST00000388782	LARP1	Q6PKG0	1096 aa	Known RBP	33.24	■■■□□ 2.91
GKAP1-204	ENST00000388782	TOM1L2	Q6ZVM7	507 aa		33.23	■■■□□ 2.91
GKAP1-204	ENST00000388782	IL13	P35225	146 aa		33.21	■■■□□ 2.91
GKAP1-204	ENST00000388782	NLRP2	Q9NX02	1062 aa		33.2	■■■□□ 2.91
GKAP1-204	ENST00000388782	CARD10	Q9BWT7	1032 aa		33.19	■■■□□ 2.9
GKAP1-204	ENST00000388782	CCDC9	Q9Y3X0	531 aa	Known RBP	33.19	■■■□□ 2.9
GKAP1-204	ENST00000388782	SPATA31A5	Q5VU36	1347 aa		33.19	■■■□□ 2.9
GKAP1-204	ENST00000388782	SPATA31A7	Q8IWB4	1347 aa		33.19	■■■□□ 2.9
GKAP1-204	ENST00000388782	NUDC	Q9Y266	331 aa		33.18	■■■□□ 2.9
GKAP1-204	ENST00000388782	RGPD1	P0DJD0	1748 aa		33.18	■■■□□ 2.9
GKAP1-204	ENST00000388782	RGPD2	P0DJD1	1756 aa		33.17	■■■□□ 2.9
GKAP1-204	ENST00000388782	QTRT2	Q9H974	415 aa	Known RBP	33.17	■■■□□ 2.9
GKAP1-204	ENST00000388782	SPATA31A1	Q5TZJ5	1347 aa		33.17	■■■□□ 2.9
GKAP1-204	ENST00000388782	NCAPD2	Q15021	1401 aa		33.15	■■■□□ 2.9
GKAP1-204	ENST00000388782	IGSF1	Q8N6C5	1336 aa		33.15	■■■□□ 2.9
GKAP1-204	ENST00000388782	NBPF6	Q5VWK0	638 aa		33.14	■■■□□ 2.9
GKAP1-204	ENST00000388782	NBPF4	Q96M43	638 aa		33.14	■■■□□ 2.9
GKAP1-204	ENST00000388782	EYA1	Q99502	592 aa		33.14	■■■□□ 2.9
GKAP1-204	ENST00000388782	THRAP3	Q9Y2W1	955 aa	Known RBP	33.14	■■■□□ 2.9
GKAP1-204	ENST00000388782	GJD4	Q96KN9	370 aa	Predicted RBP	33.13	■■■□□ 2.89
GKAP1-204	ENST00000388782	TCP11L2	Q8N4U5	519 aa		33.12	■■■□□ 2.89
GKAP1-204	ENST00000388782	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.12	■■■□□ 2.89
GKAP1-204	ENST00000388782	GLI3	P10071	1580 aa		33.12	■■■□□ 2.89
GKAP1-204	ENST00000388782	MRS2	Q9HD23	443 aa		33.11	■■■□□ 2.89
GKAP1-204	ENST00000388782	USP35	Q9P2H5	1018 aa		33.11	■■■□□ 2.89
GKAP1-204	ENST00000388782	U2SURP	O15042	1029 aa	Known RBP	33.1	■■■□□ 2.89
GKAP1-204	ENST00000388782	RBM6	P78332	1123 aa	Known RBP	33.1	■■■□□ 2.89
GKAP1-204	ENST00000388782	WNK3	Q9BYP7	1800 aa		33.09	■■■□□ 2.89
GKAP1-204	ENST00000388782	CCER2	I3L3R5	266 aa		33.09	■■■□□ 2.89
GKAP1-204	ENST00000388782	MIER1	Q8N108	512 aa		33.08	■■■□□ 2.89
GKAP1-204	ENST00000388782	BARGIN	Q6ZT62	677 aa		33.07	■■■□□ 2.88
GKAP1-204	ENST00000388782	USHBP1	Q8N6Y0	703 aa		33.07	■■■□□ 2.88
GKAP1-204	ENST00000388782	KDR	P35968	1356 aa		33.07	■■■□□ 2.88
GKAP1-204	ENST00000388782	CCDC184	Q52MB2	194 aa		33.05	■■■□□ 2.88
GKAP1-204	ENST00000388782	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.05	■■■□□ 2.88
GKAP1-204	ENST00000388782	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.04	■■■□□ 2.88
GKAP1-204	ENST00000388782	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.04	■■■□□ 2.88
GKAP1-204	ENST00000388782	WDR43	Q15061	677 aa	Known RBP eCLIP	33.04	■■■□□ 2.88
GKAP1-204	ENST00000388782	SULT6B1	Q6IMI4	303 aa		33.04	■■■□□ 2.88
GKAP1-204	ENST00000388782	DISP2	A7MBM2	1401 aa		33.03	■■■□□ 2.88
GKAP1-204	ENST00000388782	PARP4	Q9UKK3	1724 aa	Known RBP	33.03	■■■□□ 2.88
GKAP1-204	ENST00000388782	PLEKHG2	Q9H7P9	1386 aa		33.03	■■■□□ 2.88
GKAP1-204	ENST00000388782	IL2RB	P14784	551 aa		33.02	■■■□□ 2.88
GKAP1-204	ENST00000388782	RAPGEF4	Q8WZA2	1011 aa		33.02	■■■□□ 2.88
GKAP1-204	ENST00000388782	FAM98C	Q17RN3	349 aa	Known RBP	33.01	■■■□□ 2.87
GKAP1-204	ENST00000388782	THSD7A	Q9UPZ6	1657 aa		33.01	■■■□□ 2.87
GKAP1-204	ENST00000388782	MEGF6	O75095	1541 aa		32.99	■■■□□ 2.87
GKAP1-204	ENST00000388782	HMOX1	P09601	288 aa		32.99	■■■□□ 2.87
GKAP1-204	ENST00000388782	AEBP1	Q8IUX7	1158 aa		32.99	■■■□□ 2.87
GKAP1-204	ENST00000388782	OVOS2	A0A0G2JMS6	1433 aa		32.97	■■■□□ 2.87
GKAP1-204	ENST00000388782	ONECUT3	O60422	494 aa	Predicted RBP	32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms