RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CDV3Q9UKY7 258 aaKnown RBP9.62□□□□□ -0.87
RNU6-40P-201ENST00000384254 NCOA4Q13772 614 aa9.61□□□□□ -0.87
RNU6-40P-201ENST00000384254 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
RNU6-40P-201ENST00000384254 KANK4Q5T7N3 995 aaPredicted RBP9.61□□□□□ -0.87
RNU6-40P-201ENST00000384254 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
RNU6-40P-201ENST00000384254 MKRN1Q9UHC7 482 aaKnown RBP9.61□□□□□ -0.87
RNU6-40P-201ENST00000384254 DOLKQ9UPQ8 538 aa9.61□□□□□ -0.87
RNU6-40P-201ENST00000384254 BRD1O95696 1058 aa9.6□□□□□ -0.87
RNU6-40P-201ENST00000384254 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
RNU6-40P-201ENST00000384254 ELOAQ14241 798 aaKnown RBP9.6□□□□□ -0.87
RNU6-40P-201ENST00000384254 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
RNU6-40P-201ENST00000384254 TRIM50Q86XT4 487 aa9.6□□□□□ -0.87
RNU6-40P-201ENST00000384254 CCDC9Q9Y3X0 531 aaKnown RBP9.6□□□□□ -0.87
RNU6-40P-201ENST00000384254 RASA1P20936 1047 aa9.59□□□□□ -0.87
RNU6-40P-201ENST00000384254 PHTF2Q8N3S3 785 aa9.59□□□□□ -0.87
RNU6-40P-201ENST00000384254 ANKLE1Q8NAG6 615 aa9.59□□□□□ -0.87
RNU6-40P-201ENST00000384254 NOVA2Q9UNW9 492 aaKnown RBP9.59□□□□□ -0.87
RNU6-40P-201ENST00000384254 NOD1Q9Y239 953 aa9.59□□□□□ -0.87
RNU6-40P-201ENST00000384254 FAM196BA6NMK8 535 aa9.58□□□□□ -0.88
RNU6-40P-201ENST00000384254 PPEF1O14829 653 aaPredicted RBP9.58□□□□□ -0.88
RNU6-40P-201ENST00000384254 ATP1A2P50993 1020 aa9.58□□□□□ -0.88
RNU6-40P-201ENST00000384254 KCNA1Q09470 495 aa9.58□□□□□ -0.88
RNU6-40P-201ENST00000384254 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L15C9J2P7 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L10C9JJH3 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L13C9JLJ4 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L12C9JPN9 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L11C9JVI0 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L21D6R901 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L18D6R9N7 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L22D6RA61 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L17D6RBQ6 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L19D6RCP7 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L20D6RJB6 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 SH3BP2P78314 561 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 USP17L24Q0WX57 530 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 TRIM32Q13049 653 aa9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 RBM19Q9Y4C8 960 aaKnown RBP9.57□□□□□ -0.88
RNU6-40P-201ENST00000384254 GIGYF1O75420 1035 aaPredicted RBP9.56□□□□□ -0.88
RNU6-40P-201ENST00000384254 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
RNU6-40P-201ENST00000384254 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
RNU6-40P-201ENST00000384254 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
RNU6-40P-201ENST00000384254 WNT7BP56706 349 aa9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 TRMT44Q8IYL2 757 aaKnown RBP9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 SEPT12Q8IYM1 358 aa9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 TRIM52Q96A61 297 aa9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 C1QTNF2Q9BXJ5 285 aa9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 CHIC2Q9UKJ5 165 aa9.55□□□□□ -0.88
RNU6-40P-201ENST00000384254 VARSP26640 1264 aaKnown RBP9.54□□□□□ -0.88
RNU6-40P-201ENST00000384254 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
RNU6-40P-201ENST00000384254 ESF1Q9H501 851 aaKnown RBP9.54□□□□□ -0.88
RNU6-40P-201ENST00000384254 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 RPIAP49247 311 aa9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 OGFOD1Q8N543 542 aa9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 DNAAF2Q9NVR5 837 aaKnown RBP9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 ZMIZ1Q9ULJ6 1067 aa9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 PCDHB11Q9Y5F2 797 aa9.53□□□□□ -0.88
RNU6-40P-201ENST00000384254 CARNS1A5YM72 827 aa9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 RAB15P59190 212 aa9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 USP4Q13107 963 aa9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 PTK7Q13308 1070 aa9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 ANKMY2Q8IV38 441 aa9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 EHBP1Q8NDI1 1231 aa9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 STK32AQ8WU08 396 aa9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 ZNF594Q96JF6 807 aaPredicted RBP9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
RNU6-40P-201ENST00000384254 MYCP01106 439 aaPredicted RBP9.51□□□□□ -0.89
RNU6-40P-201ENST00000384254 PSME1Q06323 249 aa9.51□□□□□ -0.89
RNU6-40P-201ENST00000384254 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
RNU6-40P-201ENST00000384254 KCTD15Q96SI1 283 aaPredicted RBP9.51□□□□□ -0.89
RNU6-40P-201ENST00000384254 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
RNU6-40P-201ENST00000384254 ESPNB1AK53 854 aa9.5□□□□□ -0.89
RNU6-40P-201ENST00000384254 GTF2IP78347 998 aa9.5□□□□□ -0.89
RNU6-40P-201ENST00000384254 TMCO4Q5TGY1 634 aa9.5□□□□□ -0.89
RNU6-40P-201ENST00000384254 SPNS2Q8IVW8 549 aa9.5□□□□□ -0.89
RNU6-40P-201ENST00000384254 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
RNU6-40P-201ENST00000384254 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
RNU6-40P-201ENST00000384254 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
RNU6-40P-201ENST00000384254 PLA2G2CQ5R387 149 aa9.49□□□□□ -0.89
RNU6-40P-201ENST00000384254 MAP4K5Q9Y4K4 846 aa9.49□□□□□ -0.89
RNU6-40P-201ENST00000384254 DPYDQ12882 1025 aa9.48□□□□□ -0.89
RNU6-40P-201ENST00000384254 CLDN10P78369 228 aa9.47□□□□□ -0.89
RNU6-40P-201ENST00000384254 SEC13P55735 322 aa9.46□□□□□ -0.9
RNU6-40P-201ENST00000384254 SKOR1P84550 965 aa9.46□□□□□ -0.9
RNU6-40P-201ENST00000384254 SWI5Q1ZZU3 235 aa9.46□□□□□ -0.9
RNU6-40P-201ENST00000384254 SIX5Q8N196 739 aa9.46□□□□□ -0.9
RNU6-40P-201ENST00000384254 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
RNU6-40P-201ENST00000384254 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
RNU6-40P-201ENST00000384254 CCDC102BQ68D86 513 aa9.45□□□□□ -0.9
RNU6-40P-201ENST00000384254 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
RNU6-40P-201ENST00000384254 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms