RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 PPP2R1AP30153 589 aa20.96■□□□□ 0.95
PDGFB-202ENST00000381551 USP21Q9UK80 565 aa20.96■□□□□ 0.95
PDGFB-202ENST00000381551 KIF24Q5T7B8 1368 aa20.96■□□□□ 0.95
PDGFB-202ENST00000381551 CAMTA1Q9Y6Y1 1673 aa20.96■□□□□ 0.95
PDGFB-202ENST00000381551 BCL9LQ86UU0 1499 aa20.95■□□□□ 0.94
PDGFB-202ENST00000381551 LTN1O94822 1766 aa20.95■□□□□ 0.94
PDGFB-202ENST00000381551 MTHFSP49914 203 aa20.95■□□□□ 0.94
PDGFB-202ENST00000381551 HSP90AB2PQ58FF8 381 aa20.95■□□□□ 0.94
PDGFB-202ENST00000381551 UNC5CLQ8IV45 518 aa20.95■□□□□ 0.94
PDGFB-202ENST00000381551 PRKRIP1Q9H875 184 aaPredicted RBP20.95■□□□□ 0.94
PDGFB-202ENST00000381551 RGS17Q9UGC6 210 aaPredicted RBP20.94■□□□□ 0.94
PDGFB-202ENST00000381551 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
PDGFB-202ENST00000381551 EVA1CP58658 441 aa20.93■□□□□ 0.94
PDGFB-202ENST00000381551 RTL1A6NKG5 1358 aa20.93■□□□□ 0.94
PDGFB-202ENST00000381551 FLT4P35916 1363 aa20.93■□□□□ 0.94
PDGFB-202ENST00000381551 ABCC6O95255 1503 aa20.91■□□□□ 0.94
PDGFB-202ENST00000381551 ZNF772Q68DY9 489 aaPredicted RBP20.91■□□□□ 0.94
PDGFB-202ENST00000381551 SMG6Q86US8 1419 aaKnown RBP20.91■□□□□ 0.94
PDGFB-202ENST00000381551 PEAK1Q9H792 1746 aa20.91■□□□□ 0.94
PDGFB-202ENST00000381551 STRN4Q9NRL3 753 aa20.91■□□□□ 0.94
PDGFB-202ENST00000381551 NWD2Q9ULI1 1742 aa20.9■□□□□ 0.94
PDGFB-202ENST00000381551 PLCH1Q4KWH8 1693 aa20.9■□□□□ 0.94
PDGFB-202ENST00000381551 BLMP54132 1417 aaPredicted RBP20.9■□□□□ 0.94
PDGFB-202ENST00000381551 INSRP06213 1382 aa20.9■□□□□ 0.94
PDGFB-202ENST00000381551 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
PDGFB-202ENST00000381551 RGPD5Q99666 1765 aa20.9■□□□□ 0.94
PDGFB-202ENST00000381551 COL5A2P05997 1499 aaPredicted RBP20.89■□□□□ 0.94
PDGFB-202ENST00000381551 ANP32CO43423 234 aa20.89■□□□□ 0.93
PDGFB-202ENST00000381551 LARP1Q6PKG0 1096 aaKnown RBP20.89■□□□□ 0.93
PDGFB-202ENST00000381551 ANKRD24Q8TF21 1146 aa20.89■□□□□ 0.93
PDGFB-202ENST00000381551 QTRT2Q9H974 415 aaKnown RBP20.89■□□□□ 0.93
PDGFB-202ENST00000381551 ERBB3P21860 1342 aa20.88■□□□□ 0.93
PDGFB-202ENST00000381551 VPS72Q15906 364 aa20.88■□□□□ 0.93
PDGFB-202ENST00000381551 LTV1Q96GA3 475 aaPredicted RBP20.88■□□□□ 0.93
PDGFB-202ENST00000381551 TRPC5Q9UL62 973 aaPredicted RBP20.88■□□□□ 0.93
PDGFB-202ENST00000381551 WDR17Q8IZU2 1322 aa20.87■□□□□ 0.93
PDGFB-202ENST00000381551 MYBBP1AQ9BQG0 1328 aaKnown RBP20.86■□□□□ 0.93
PDGFB-202ENST00000381551 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
PDGFB-202ENST00000381551 NRAPQ86VF7 1730 aa20.86■□□□□ 0.93
PDGFB-202ENST00000381551 CSB-PGBD3P0DP91 1061 aa20.85■□□□□ 0.93
PDGFB-202ENST00000381551 CDK12Q9NYV4 1490 aaPredicted RBP20.85■□□□□ 0.93
PDGFB-202ENST00000381551 EIF4A2Q14240 407 aaKnown RBP20.84■□□□□ 0.93
PDGFB-202ENST00000381551 TOM1L2Q6ZVM7 507 aa20.84■□□□□ 0.93
PDGFB-202ENST00000381551 GJD4Q96KN9 370 aaPredicted RBP20.84■□□□□ 0.93
PDGFB-202ENST00000381551 ATRNO75882 1429 aa20.84■□□□□ 0.93
PDGFB-202ENST00000381551 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.84■□□□□ 0.93
PDGFB-202ENST00000381551 SPATA31A5Q5VU36 1347 aa20.83■□□□□ 0.93
PDGFB-202ENST00000381551 SPATA31A7Q8IWB4 1347 aa20.83■□□□□ 0.93
PDGFB-202ENST00000381551 IL13P35225 146 aa20.83■□□□□ 0.93
PDGFB-202ENST00000381551 POTEAQ6S8J7 498 aa20.83■□□□□ 0.93
PDGFB-202ENST00000381551 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.93
PDGFB-202ENST00000381551 CRB1P82279 1406 aa20.82■□□□□ 0.92
PDGFB-202ENST00000381551 NBPF6Q5VWK0 638 aa20.82■□□□□ 0.92
PDGFB-202ENST00000381551 NBPF4Q96M43 638 aa20.82■□□□□ 0.92
PDGFB-202ENST00000381551 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
PDGFB-202ENST00000381551 NLRP2Q9NX02 1062 aa20.82■□□□□ 0.92
PDGFB-202ENST00000381551 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
PDGFB-202ENST00000381551 SPATA31A1Q5TZJ5 1347 aa20.81■□□□□ 0.92
PDGFB-202ENST00000381551 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
PDGFB-202ENST00000381551 USP35Q9P2H5 1018 aa20.8■□□□□ 0.92
PDGFB-202ENST00000381551 RBM6P78332 1123 aaKnown RBP20.79■□□□□ 0.92
PDGFB-202ENST00000381551 EYA1Q99502 592 aa20.79■□□□□ 0.92
PDGFB-202ENST00000381551 COL3A1P02461 1466 aaPredicted RBP20.78■□□□□ 0.92
PDGFB-202ENST00000381551 TCP11L2Q8N4U5 519 aa20.78■□□□□ 0.92
PDGFB-202ENST00000381551 THRAP3Q9Y2W1 955 aaKnown RBP20.78■□□□□ 0.92
PDGFB-202ENST00000381551 ONECUT3O60422 494 aaPredicted RBP20.77■□□□□ 0.92
PDGFB-202ENST00000381551 RXRBP28702 533 aa20.77■□□□□ 0.92
PDGFB-202ENST00000381551 BARGINQ6ZT62 677 aa20.76■□□□□ 0.91
PDGFB-202ENST00000381551 USHBP1Q8N6Y0 703 aa20.75■□□□□ 0.91
PDGFB-202ENST00000381551 IGSF1Q8N6C5 1336 aa20.75■□□□□ 0.91
PDGFB-202ENST00000381551 RGPD2P0DJD1 1756 aa20.74■□□□□ 0.91
PDGFB-202ENST00000381551 GLI3P10071 1580 aa20.74■□□□□ 0.91
PDGFB-202ENST00000381551 CCDC184Q52MB2 194 aa20.74■□□□□ 0.91
PDGFB-202ENST00000381551 FAM98CQ17RN3 349 aaKnown RBP20.73■□□□□ 0.91
PDGFB-202ENST00000381551 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
PDGFB-202ENST00000381551 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
PDGFB-202ENST00000381551 NCAPD2Q15021 1401 aa20.71■□□□□ 0.91
PDGFB-202ENST00000381551 U2SURPO15042 1029 aaKnown RBP20.71■□□□□ 0.91
PDGFB-202ENST00000381551 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
PDGFB-202ENST00000381551 CDCA7Q9BWT1 371 aaPredicted RBP20.71■□□□□ 0.91
PDGFB-202ENST00000381551 IL2RBP14784 551 aa20.7■□□□□ 0.9
PDGFB-202ENST00000381551 AEBP1Q8IUX7 1158 aa20.7■□□□□ 0.9
PDGFB-202ENST00000381551 MIER1Q8N108 512 aa20.69■□□□□ 0.9
PDGFB-202ENST00000381551 RGPD1P0DJD0 1748 aa20.69■□□□□ 0.9
PDGFB-202ENST00000381551 HMOX1P09601 288 aa20.68■□□□□ 0.9
PDGFB-202ENST00000381551 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
PDGFB-202ENST00000381551 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.9
PDGFB-202ENST00000381551 SEPT12Q8IYM1 358 aa20.68■□□□□ 0.9
PDGFB-202ENST00000381551 KDRP35968 1356 aa20.68■□□□□ 0.9
PDGFB-202ENST00000381551 RAPGEF4Q8WZA2 1011 aa20.67■□□□□ 0.9
PDGFB-202ENST00000381551 MRS2Q9HD23 443 aa20.67■□□□□ 0.9
PDGFB-202ENST00000381551 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
PDGFB-202ENST00000381551 TATP17735 454 aaPredicted RBP20.66■□□□□ 0.9
PDGFB-202ENST00000381551 FCHSD2O94868 740 aa20.65■□□□□ 0.9
PDGFB-202ENST00000381551 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
PDGFB-202ENST00000381551 A0A0G2JS52 829 aa20.64■□□□□ 0.89
PDGFB-202ENST00000381551 CCER2I3L3R5 266 aa20.64■□□□□ 0.89
PDGFB-202ENST00000381551 EXOC5O00471 708 aa20.64■□□□□ 0.89
PDGFB-202ENST00000381551 MYT1Q01538 1121 aa20.64■□□□□ 0.89
PDGFB-202ENST00000381551 MEGF6O75095 1541 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms