RNA–Protein interactions for RNA: ENST00000381158.3

RAB3C-202, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-202ENST00000381158 NLRP13Q86W25 1043 aa12.93□□□□□ -0.34
RAB3C-202ENST00000381158 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
RAB3C-202ENST00000381158 NEUROD1Q13562 356 aa12.92□□□□□ -0.34
RAB3C-202ENST00000381158 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
RAB3C-202ENST00000381158 EVC2Q86UK5 1308 aa12.91□□□□□ -0.34
RAB3C-202ENST00000381158 SRCAPQ6ZRS2 3230 aa12.91□□□□□ -0.34
RAB3C-202ENST00000381158 EVA1CP58658 441 aa12.91□□□□□ -0.34
RAB3C-202ENST00000381158 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
RAB3C-202ENST00000381158 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
RAB3C-202ENST00000381158 LTN1O94822 1766 aa12.9□□□□□ -0.34
RAB3C-202ENST00000381158 CRB1P82279 1406 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
RAB3C-202ENST00000381158 ABCB7O75027 752 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 DSG3P32926 999 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 NLRP6P59044 892 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 EZH2Q15910 746 aaKnown RBP12.89□□□□□ -0.35
RAB3C-202ENST00000381158 FAM196AQ6ZSG2 479 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 TCP11L2Q8N4U5 519 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 AATKQ6ZMQ8 1374 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 RGPD3A6NKT7 1758 aaPredicted RBP12.89□□□□□ -0.35
RAB3C-202ENST00000381158 RGPD4Q7Z3J3 1758 aa12.89□□□□□ -0.35
RAB3C-202ENST00000381158 NFAT5O94916 1531 aa12.88□□□□□ -0.35
RAB3C-202ENST00000381158 TRIM37O94972 964 aa12.88□□□□□ -0.35
RAB3C-202ENST00000381158 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
RAB3C-202ENST00000381158 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
RAB3C-202ENST00000381158 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
RAB3C-202ENST00000381158 SBNO2Q9Y2G9 1366 aa12.87□□□□□ -0.35
RAB3C-202ENST00000381158 TTC21BQ7Z4L5 1316 aa12.87□□□□□ -0.35
RAB3C-202ENST00000381158 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
RAB3C-202ENST00000381158 PDE3BQ13370 1112 aa12.85□□□□□ -0.35
RAB3C-202ENST00000381158 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
RAB3C-202ENST00000381158 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
RAB3C-202ENST00000381158 ABCC6O95255 1503 aa12.84□□□□□ -0.35
RAB3C-202ENST00000381158 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
RAB3C-202ENST00000381158 APBA3O96018 575 aa12.84□□□□□ -0.35
RAB3C-202ENST00000381158 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
RAB3C-202ENST00000381158 ARHGEF25Q86VW2 580 aa12.84□□□□□ -0.35
RAB3C-202ENST00000381158 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
RAB3C-202ENST00000381158 KTN1Q86UP2 1357 aaKnown RBP12.83□□□□□ -0.36
RAB3C-202ENST00000381158 WDR17Q8IZU2 1322 aa12.83□□□□□ -0.36
RAB3C-202ENST00000381158 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
RAB3C-202ENST00000381158 OVOS2A0A0G2JMS6 1433 aa12.81□□□□□ -0.36
RAB3C-202ENST00000381158 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
RAB3C-202ENST00000381158 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
RAB3C-202ENST00000381158 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
RAB3C-202ENST00000381158 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
RAB3C-202ENST00000381158 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
RAB3C-202ENST00000381158 CASZ1Q86V15 1759 aa12.8□□□□□ -0.36
RAB3C-202ENST00000381158 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
RAB3C-202ENST00000381158 SOX12O15370 315 aa12.79□□□□□ -0.36
RAB3C-202ENST00000381158 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
RAB3C-202ENST00000381158 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
RAB3C-202ENST00000381158 BCL9O00512 1426 aa12.79□□□□□ -0.36
RAB3C-202ENST00000381158 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
RAB3C-202ENST00000381158 DDB1Q16531 1140 aa12.78□□□□□ -0.36
RAB3C-202ENST00000381158 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
RAB3C-202ENST00000381158 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
RAB3C-202ENST00000381158 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
RAB3C-202ENST00000381158 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.36
RAB3C-202ENST00000381158 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
RAB3C-202ENST00000381158 NME9Q86XW9 330 aa12.77□□□□□ -0.37
RAB3C-202ENST00000381158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAB3C-202ENST00000381158 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.37
RAB3C-202ENST00000381158 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
RAB3C-202ENST00000381158 CDCA7Q9BWT1 371 aaPredicted RBP12.76□□□□□ -0.37
RAB3C-202ENST00000381158 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
RAB3C-202ENST00000381158 BTAF1O14981 1849 aa12.76□□□□□ -0.37
RAB3C-202ENST00000381158 PLSCR1O15162 318 aa12.75□□□□□ -0.37
RAB3C-202ENST00000381158 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
RAB3C-202ENST00000381158 CCDC7Q96M83 1385 aa12.75□□□□□ -0.37
RAB3C-202ENST00000381158 PUS7Q96PZ0 661 aaKnown RBP12.75□□□□□ -0.37
RAB3C-202ENST00000381158 TESK2Q96S53 571 aa12.75□□□□□ -0.37
RAB3C-202ENST00000381158 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
RAB3C-202ENST00000381158 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
RAB3C-202ENST00000381158 TMC1Q8TDI8 760 aa12.74□□□□□ -0.37
RAB3C-202ENST00000381158 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
RAB3C-202ENST00000381158 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
RAB3C-202ENST00000381158 ERBB3P21860 1342 aa12.73□□□□□ -0.37
RAB3C-202ENST00000381158 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
RAB3C-202ENST00000381158 HDGFL2Q7Z4V5 671 aaPredicted RBP12.73□□□□□ -0.37
RAB3C-202ENST00000381158 PROM2Q8N271 834 aa12.73□□□□□ -0.37
RAB3C-202ENST00000381158 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
RAB3C-202ENST00000381158 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
RAB3C-202ENST00000381158 MYOM1P52179 1685 aa12.71□□□□□ -0.37
RAB3C-202ENST00000381158 PAPPAQ13219 1627 aa12.71□□□□□ -0.37
RAB3C-202ENST00000381158 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.37
RAB3C-202ENST00000381158 EXOC5O00471 708 aa12.71□□□□□ -0.37
RAB3C-202ENST00000381158 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.37
RAB3C-202ENST00000381158 NINLQ9Y2I6 1382 aa12.69□□□□□ -0.38
RAB3C-202ENST00000381158 DOT1LQ8TEK3 1739 aa12.69□□□□□ -0.38
RAB3C-202ENST00000381158 KCNQ2O43526 872 aa12.69□□□□□ -0.38
RAB3C-202ENST00000381158 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
RAB3C-202ENST00000381158 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
RAB3C-202ENST00000381158 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
RAB3C-202ENST00000381158 TUBGCP6Q96RT7 1819 aa12.68□□□□□ -0.38
RAB3C-202ENST00000381158 NLRP2Q9NX02 1062 aa12.68□□□□□ -0.38
RAB3C-202ENST00000381158 IL2RBP14784 551 aa12.67□□□□□ -0.38
RAB3C-202ENST00000381158 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
RAB3C-202ENST00000381158 TXNRD1Q16881 649 aa12.67□□□□□ -0.38
RAB3C-202ENST00000381158 IP6K1Q92551 441 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms