RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 RTL1A6NKG5 1358 aa20.19■□□□□ 0.82
RPP40-202ENST00000380051 CPDO75976 1380 aa20.19■□□□□ 0.82
RPP40-202ENST00000380051 FLT4P35916 1363 aa20.19■□□□□ 0.82
RPP40-202ENST00000380051 IP6K1Q92551 441 aa20.18■□□□□ 0.82
RPP40-202ENST00000380051 SHPRHQ149N8 1683 aa20.18■□□□□ 0.82
RPP40-202ENST00000380051 LTN1O94822 1766 aa20.18■□□□□ 0.82
RPP40-202ENST00000380051 HOXC9P31274 260 aa20.18■□□□□ 0.82
RPP40-202ENST00000380051 PNISRQ8TF01 805 aaKnown RBP20.18■□□□□ 0.82
RPP40-202ENST00000380051 ABCA3Q99758 1704 aa20.17■□□□□ 0.82
RPP40-202ENST00000380051 FBXO41Q8TF61 875 aa20.17■□□□□ 0.82
RPP40-202ENST00000380051 DIAPH1O60610 1272 aaKnown RBP20.16■□□□□ 0.82
RPP40-202ENST00000380051 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
RPP40-202ENST00000380051 PEAK1Q9H792 1746 aa20.16■□□□□ 0.82
RPP40-202ENST00000380051 KIAA0232Q92628 1395 aa20.15■□□□□ 0.82
RPP40-202ENST00000380051 ZBTB7CA1YPR0 619 aa20.15■□□□□ 0.82
RPP40-202ENST00000380051 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
RPP40-202ENST00000380051 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.82
RPP40-202ENST00000380051 SPATA31A6Q5VVP1 1343 aa20.14■□□□□ 0.81
RPP40-202ENST00000380051 ABCC6O95255 1503 aa20.13■□□□□ 0.81
RPP40-202ENST00000380051 PRDM11Q9NQV5 511 aa20.13■□□□□ 0.81
RPP40-202ENST00000380051 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
RPP40-202ENST00000380051 IL13P35225 146 aa20.12■□□□□ 0.81
RPP40-202ENST00000380051 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
RPP40-202ENST00000380051 ILDR1Q86SU0 546 aaPredicted RBP20.12■□□□□ 0.81
RPP40-202ENST00000380051 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
RPP40-202ENST00000380051 FAM9BQ8IZU0 186 aa20.11■□□□□ 0.81
RPP40-202ENST00000380051 COL18A1P39060 1754 aa20.11■□□□□ 0.81
RPP40-202ENST00000380051 NUTM2BA6NNL0 878 aaPredicted RBP20.1■□□□□ 0.81
RPP40-202ENST00000380051 NUTM2EB1AL46 878 aaPredicted RBP20.1■□□□□ 0.81
RPP40-202ENST00000380051 CHRNA2Q15822 529 aa20.1■□□□□ 0.81
RPP40-202ENST00000380051 NUTM2AQ8IVF1 878 aaPredicted RBP20.1■□□□□ 0.81
RPP40-202ENST00000380051 AXIN2Q9Y2T1 843 aa20.1■□□□□ 0.81
RPP40-202ENST00000380051 FAM83GA6ND36 823 aa20.09■□□□□ 0.81
RPP40-202ENST00000380051 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
RPP40-202ENST00000380051 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
RPP40-202ENST00000380051 ADAMTS2O95450 1211 aa20.06■□□□□ 0.8
RPP40-202ENST00000380051 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
RPP40-202ENST00000380051 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.8
RPP40-202ENST00000380051 ANKRD24Q8TF21 1146 aa20.06■□□□□ 0.8
RPP40-202ENST00000380051 COL14A1Q05707 1796 aaKnown RBP20.06■□□□□ 0.8
RPP40-202ENST00000380051 LTV1Q96GA3 475 aaPredicted RBP20.05■□□□□ 0.8
RPP40-202ENST00000380051 RGPD5Q99666 1765 aa20.05■□□□□ 0.8
RPP40-202ENST00000380051 LMO7Q8WWI1 1683 aa20.05■□□□□ 0.8
RPP40-202ENST00000380051 ERBB3P21860 1342 aa20.05■□□□□ 0.8
RPP40-202ENST00000380051 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
RPP40-202ENST00000380051 CAMTA1Q9Y6Y1 1673 aa20.04■□□□□ 0.8
RPP40-202ENST00000380051 FCHSD2O94868 740 aa20.03■□□□□ 0.8
RPP40-202ENST00000380051 EYA1Q99502 592 aa20.03■□□□□ 0.8
RPP40-202ENST00000380051 EVA1CP58658 441 aa20.02■□□□□ 0.8
RPP40-202ENST00000380051 BTG4Q9NY30 223 aa20.02■□□□□ 0.8
RPP40-202ENST00000380051 IGSF1Q8N6C5 1336 aa20.01■□□□□ 0.79
RPP40-202ENST00000380051 CSB-PGBD3P0DP91 1061 aa20.01■□□□□ 0.79
RPP40-202ENST00000380051 RGPD1P0DJD0 1748 aa20■□□□□ 0.79
RPP40-202ENST00000380051 WDR17Q8IZU2 1322 aa20■□□□□ 0.79
RPP40-202ENST00000380051 COL5A2P05997 1499 aaPredicted RBP20■□□□□ 0.79
RPP40-202ENST00000380051 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
RPP40-202ENST00000380051 SULT6B1Q6IMI4 303 aa19.99■□□□□ 0.79
RPP40-202ENST00000380051 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
RPP40-202ENST00000380051 LRP6O75581 1613 aa19.99■□□□□ 0.79
RPP40-202ENST00000380051 FAM208AQ9UK61 1670 aaKnown RBP19.98■□□□□ 0.79
RPP40-202ENST00000380051 HMOX1P09601 288 aa19.98■□□□□ 0.79
RPP40-202ENST00000380051 MEX3CQ5U5Q3 659 aaKnown RBP19.98■□□□□ 0.79
RPP40-202ENST00000380051 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
RPP40-202ENST00000380051 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
RPP40-202ENST00000380051 RSPH6AQ9H0K4 717 aa19.98■□□□□ 0.79
RPP40-202ENST00000380051 SLIT2O94813 1529 aa19.97■□□□□ 0.79
RPP40-202ENST00000380051 C8orf37Q96NL8 207 aa19.97■□□□□ 0.79
RPP40-202ENST00000380051 STRN4Q9NRL3 753 aa19.97■□□□□ 0.79
RPP40-202ENST00000380051 NLRP2Q9NX02 1062 aa19.97■□□□□ 0.79
RPP40-202ENST00000380051 KDRP35968 1356 aa19.97■□□□□ 0.79
RPP40-202ENST00000380051 NWD2Q9ULI1 1742 aa19.96■□□□□ 0.79
RPP40-202ENST00000380051 NEFMP07197 916 aa19.96■□□□□ 0.79
RPP40-202ENST00000380051 TOM1L2Q6ZVM7 507 aa19.96■□□□□ 0.79
RPP40-202ENST00000380051 FNBP4Q8N3X1 1017 aaPredicted RBP19.96■□□□□ 0.79
RPP40-202ENST00000380051 PLEKHF1Q96S99 279 aa19.96■□□□□ 0.79
RPP40-202ENST00000380051 PLCH1Q4KWH8 1693 aa19.96■□□□□ 0.79
RPP40-202ENST00000380051 CARD10Q9BWT7 1032 aa19.95■□□□□ 0.78
RPP40-202ENST00000380051 RGPD2P0DJD1 1756 aa19.95■□□□□ 0.78
RPP40-202ENST00000380051 NCAPD2Q15021 1401 aa19.95■□□□□ 0.78
RPP40-202ENST00000380051 NPM3O75607 178 aaKnown RBP19.94■□□□□ 0.78
RPP40-202ENST00000380051 PRKAR2BP31323 418 aa19.94■□□□□ 0.78
RPP40-202ENST00000380051 LARP1Q6PKG0 1096 aaKnown RBP19.94■□□□□ 0.78
RPP40-202ENST00000380051 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
RPP40-202ENST00000380051 UNC5CLQ8IV45 518 aa19.93■□□□□ 0.78
RPP40-202ENST00000380051 CCDC146Q8IYE0 955 aa19.93■□□□□ 0.78
RPP40-202ENST00000380051 CRB1P82279 1406 aa19.93■□□□□ 0.78
RPP40-202ENST00000380051 USHBP1Q8N6Y0 703 aa19.92■□□□□ 0.78
RPP40-202ENST00000380051 MAPK8IP3Q9UPT6 1336 aa19.92■□□□□ 0.78
RPP40-202ENST00000380051 NRAPQ86VF7 1730 aa19.91■□□□□ 0.78
RPP40-202ENST00000380051 USP21Q9UK80 565 aa19.9■□□□□ 0.78
RPP40-202ENST00000380051 BCL9LQ86UU0 1499 aa19.89■□□□□ 0.77
RPP40-202ENST00000380051 APAF1O14727 1248 aa19.89■□□□□ 0.77
RPP40-202ENST00000380051 HNRNPUQ00839 825 aaKnown RBP eCLIP19.89■□□□□ 0.77
RPP40-202ENST00000380051 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
RPP40-202ENST00000380051 NGEFQ8N5V2 710 aa19.89■□□□□ 0.77
RPP40-202ENST00000380051 PLEKHG2Q9H7P9 1386 aa19.89■□□□□ 0.77
RPP40-202ENST00000380051 RAPGEF4Q8WZA2 1011 aa19.88■□□□□ 0.77
RPP40-202ENST00000380051 PHACTR3Q96KR7 559 aa19.88■□□□□ 0.77
RPP40-202ENST00000380051 TATP17735 454 aaPredicted RBP19.87■□□□□ 0.77
RPP40-202ENST00000380051 VPS72Q15906 364 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms