RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 IVLP07476 585 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
ITM2B-202ENST00000378565 GNAI1P63096 354 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 CYP46A1Q9Y6A2 500 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
ITM2B-202ENST00000378565 TAF4BQ92750 862 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 EIF2S2P20042 333 aaKnown RBP13.37□□□□□ -0.27
ITM2B-202ENST00000378565 UBTFL1P0CB47 393 aaPredicted RBP13.37□□□□□ -0.27
ITM2B-202ENST00000378565 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
ITM2B-202ENST00000378565 GGT6Q6P531 493 aa13.37□□□□□ -0.27
ITM2B-202ENST00000378565 GCOM1H8Y6P7 765 aaPredicted RBP13.37□□□□□ -0.27
ITM2B-202ENST00000378565 MYZAPP0CAP1 466 aa13.37□□□□□ -0.27
ITM2B-202ENST00000378565 SPECC1LQ69YQ0 1117 aa13.36□□□□□ -0.27
ITM2B-202ENST00000378565 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
ITM2B-202ENST00000378565 GIGYF2Q6Y7W6 1299 aaKnown RBP13.36□□□□□ -0.27
ITM2B-202ENST00000378565 IFFO1Q0D2I5 559 aa13.36□□□□□ -0.27
ITM2B-202ENST00000378565 CFAP100Q494V2 611 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 KRT222Q8N1A0 295 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 NACADO15069 1562 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 CFAP57Q96MR6 1250 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 PRIMPOLQ96LW4 560 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
ITM2B-202ENST00000378565 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
ITM2B-202ENST00000378565 CCDC113Q9H0I3 377 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 LMAN1P49257 510 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 PAF1Q8N7H5 531 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 SMARCC1Q92922 1105 aaPredicted RBP13.35□□□□□ -0.27
ITM2B-202ENST00000378565 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
ITM2B-202ENST00000378565 C16orf45Q96MC5 204 aaPredicted RBP13.35□□□□□ -0.27
ITM2B-202ENST00000378565 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
ITM2B-202ENST00000378565 TRIM22Q8IYM9 498 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 CCDC183Q5T5S1 534 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 FEZ1Q99689 392 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 NEMFO60524 1076 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 ATP2B1P20020 1258 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 ERC1Q8IUD2 1116 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 CARMIL2Q6F5E8 1435 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 SLC3A2P08195 630 aaKnown RBP13.34□□□□□ -0.27
ITM2B-202ENST00000378565 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
ITM2B-202ENST00000378565 NECTIN2Q92692 538 aa13.33□□□□□ -0.27
ITM2B-202ENST00000378565 MLECQ14165 292 aa13.33□□□□□ -0.28
ITM2B-202ENST00000378565 SPA17Q15506 151 aa13.33□□□□□ -0.28
ITM2B-202ENST00000378565 HSPA4P34932 840 aa13.33□□□□□ -0.28
ITM2B-202ENST00000378565 PDE3AQ14432 1141 aa13.33□□□□□ -0.28
ITM2B-202ENST00000378565 CDKL5O76039 1030 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 NEUROD6Q96NK8 337 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 DESP17661 470 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 PAXBP1Q9Y5B6 917 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 ERCC6Q03468 1493 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 SEPT6Q14141 434 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 EIF5P55010 431 aaKnown RBP13.32□□□□□ -0.28
ITM2B-202ENST00000378565 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 SEPT11Q9NVA2 429 aaKnown RBP13.32□□□□□ -0.28
ITM2B-202ENST00000378565 CLIP2Q9UDT6 1046 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 BMS1Q14692 1282 aaKnown RBP13.32□□□□□ -0.28
ITM2B-202ENST00000378565 PDZRN3Q9UPQ7 1066 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 CUX1P39880 1505 aa13.32□□□□□ -0.28
ITM2B-202ENST00000378565 GTPBP4Q9BZE4 634 aaKnown RBP13.31□□□□□ -0.28
ITM2B-202ENST00000378565 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
ITM2B-202ENST00000378565 C6orf163Q5TEZ5 329 aa13.31□□□□□ -0.28
ITM2B-202ENST00000378565 CPSF2Q9P2I0 782 aaKnown RBP13.31□□□□□ -0.28
ITM2B-202ENST00000378565 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
ITM2B-202ENST00000378565 CLGNO14967 610 aa13.31□□□□□ -0.28
ITM2B-202ENST00000378565 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
ITM2B-202ENST00000378565 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
ITM2B-202ENST00000378565 GNAI3P08754 354 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 GSDMDP57764 484 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 RAI14Q9P0K7 980 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 TRAK1Q9UPV9 953 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
ITM2B-202ENST00000378565 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 SSR1P43307 286 aaKnown RBP13.3□□□□□ -0.28
ITM2B-202ENST00000378565 GOLGA6L9A6NEM1 432 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 ANKS4BQ8N8V4 417 aa13.3□□□□□ -0.28
ITM2B-202ENST00000378565 WDR66Q8TBY9 1149 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 URI1O94763 535 aaPredicted RBP13.29□□□□□ -0.28
ITM2B-202ENST00000378565 GOPCQ9HD26 462 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 KIF4BQ2VIQ3 1234 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 DAAM2Q86T65 1068 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 CETN2P41208 172 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 TAOK3Q9H2K8 898 aa13.29□□□□□ -0.28
ITM2B-202ENST00000378565 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
ITM2B-202ENST00000378565 NAA15Q9BXJ9 866 aaKnown RBP13.28□□□□□ -0.28
ITM2B-202ENST00000378565 GSTTP1A0A1W2PQM5 241 aa13.28□□□□□ -0.28
ITM2B-202ENST00000378565 TDO2P48775 406 aa13.28□□□□□ -0.28
ITM2B-202ENST00000378565 CEP112Q8N8E3 955 aa13.28□□□□□ -0.28
ITM2B-202ENST00000378565 BCCIPQ9P287 314 aaKnown RBP eCLIP13.28□□□□□ -0.28
ITM2B-202ENST00000378565 ANKRD18BA2A2Z9 1011 aa13.28□□□□□ -0.28
ITM2B-202ENST00000378565 FYB1O15117 783 aa13.28□□□□□ -0.28
ITM2B-202ENST00000378565 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
ITM2B-202ENST00000378565 TOP1P11387 765 aaKnown RBP13.28□□□□□ -0.28
ITM2B-202ENST00000378565 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms