RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 DIAPH1O60610 1272 aaKnown RBP21.11■□□□□ 0.97
CCDC107-204ENST00000378409 HOXC9P31274 260 aa21.11■□□□□ 0.97
CCDC107-204ENST00000378409 WDR43Q15061 677 aaKnown RBP eCLIP21.11■□□□□ 0.97
CCDC107-204ENST00000378409 HSP90AB2PQ58FF8 381 aa21.1■□□□□ 0.97
CCDC107-204ENST00000378409 CPDO75976 1380 aa21.1■□□□□ 0.97
CCDC107-204ENST00000378409 KIAA0232Q92628 1395 aa21.1■□□□□ 0.97
CCDC107-204ENST00000378409 IP6K1Q92551 441 aa21.09■□□□□ 0.97
CCDC107-204ENST00000378409 JCADQ9P266 1359 aa21.09■□□□□ 0.97
CCDC107-204ENST00000378409 ABCC6O95255 1503 aa21.09■□□□□ 0.97
CCDC107-204ENST00000378409 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.97
CCDC107-204ENST00000378409 RGPD1P0DJD0 1748 aa21.07■□□□□ 0.96
CCDC107-204ENST00000378409 NUDCQ9Y266 331 aa21.07■□□□□ 0.96
CCDC107-204ENST00000378409 U2SURPO15042 1029 aaKnown RBP21.06■□□□□ 0.96
CCDC107-204ENST00000378409 EIF4A2Q14240 407 aaKnown RBP21.06■□□□□ 0.96
CCDC107-204ENST00000378409 PRDM11Q9NQV5 511 aa21.06■□□□□ 0.96
CCDC107-204ENST00000378409 LMO7Q8WWI1 1683 aa21.05■□□□□ 0.96
CCDC107-204ENST00000378409 COL14A1Q05707 1796 aaKnown RBP21.05■□□□□ 0.96
CCDC107-204ENST00000378409 BLMP54132 1417 aaPredicted RBP21.05■□□□□ 0.96
CCDC107-204ENST00000378409 IL13P35225 146 aa21.05■□□□□ 0.96
CCDC107-204ENST00000378409 CHRNA2Q15822 529 aa21.05■□□□□ 0.96
CCDC107-204ENST00000378409 LTV1Q96GA3 475 aaPredicted RBP21.04■□□□□ 0.96
CCDC107-204ENST00000378409 ADAMTS8Q9UP79 889 aa21.04■□□□□ 0.96
CCDC107-204ENST00000378409 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
CCDC107-204ENST00000378409 NUTM2BA6NNL0 878 aaPredicted RBP21.03■□□□□ 0.96
CCDC107-204ENST00000378409 NUTM2EB1AL46 878 aaPredicted RBP21.03■□□□□ 0.96
CCDC107-204ENST00000378409 U2AF1L5P0DN76 240 aaPredicted RBP21.03■□□□□ 0.96
CCDC107-204ENST00000378409 U2AF1Q01081 240 aaKnown RBP eCLIP21.03■□□□□ 0.96
CCDC107-204ENST00000378409 NUTM2AQ8IVF1 878 aaPredicted RBP21.03■□□□□ 0.96
CCDC107-204ENST00000378409 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
CCDC107-204ENST00000378409 PLCH1Q4KWH8 1693 aa21.02■□□□□ 0.96
CCDC107-204ENST00000378409 AXIN2Q9Y2T1 843 aa21.02■□□□□ 0.96
CCDC107-204ENST00000378409 CAMTA1Q9Y6Y1 1673 aa21■□□□□ 0.95
CCDC107-204ENST00000378409 ADAMTS2O95450 1211 aa20.99■□□□□ 0.95
CCDC107-204ENST00000378409 ANKRD24Q8TF21 1146 aa20.99■□□□□ 0.95
CCDC107-204ENST00000378409 FAM83GA6ND36 823 aa20.98■□□□□ 0.95
CCDC107-204ENST00000378409 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
CCDC107-204ENST00000378409 SPATA31A6Q5VVP1 1343 aa20.98■□□□□ 0.95
CCDC107-204ENST00000378409 HMOX1P09601 288 aa20.97■□□□□ 0.95
CCDC107-204ENST00000378409 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
CCDC107-204ENST00000378409 ERBB3P21860 1342 aa20.96■□□□□ 0.95
CCDC107-204ENST00000378409 NWD2Q9ULI1 1742 aa20.95■□□□□ 0.94
CCDC107-204ENST00000378409 COL5A2P05997 1499 aaPredicted RBP20.95■□□□□ 0.94
CCDC107-204ENST00000378409 EYA1Q99502 592 aa20.95■□□□□ 0.94
CCDC107-204ENST00000378409 LRP6O75581 1613 aa20.95■□□□□ 0.94
CCDC107-204ENST00000378409 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
CCDC107-204ENST00000378409 NRAPQ86VF7 1730 aa20.95■□□□□ 0.94
CCDC107-204ENST00000378409 CSB-PGBD3P0DP91 1061 aa20.94■□□□□ 0.94
CCDC107-204ENST00000378409 SULT6B1Q6IMI4 303 aa20.94■□□□□ 0.94
CCDC107-204ENST00000378409 FCHSD2O94868 740 aa20.93■□□□□ 0.94
CCDC107-204ENST00000378409 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
CCDC107-204ENST00000378409 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
CCDC107-204ENST00000378409 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
CCDC107-204ENST00000378409 PNNQ9H307 717 aaKnown RBP20.93■□□□□ 0.94
CCDC107-204ENST00000378409 BTG4Q9NY30 223 aa20.93■□□□□ 0.94
CCDC107-204ENST00000378409 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
CCDC107-204ENST00000378409 NBPF6Q5VWK0 638 aa20.92■□□□□ 0.94
CCDC107-204ENST00000378409 USHBP1Q8N6Y0 703 aa20.92■□□□□ 0.94
CCDC107-204ENST00000378409 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
CCDC107-204ENST00000378409 NBPF4Q96M43 638 aa20.92■□□□□ 0.94
CCDC107-204ENST00000378409 PRKAR2BP31323 418 aa20.91■□□□□ 0.94
CCDC107-204ENST00000378409 STRN4Q9NRL3 753 aa20.91■□□□□ 0.94
CCDC107-204ENST00000378409 NLRP2Q9NX02 1062 aa20.91■□□□□ 0.94
CCDC107-204ENST00000378409 KDRP35968 1356 aa20.9■□□□□ 0.94
CCDC107-204ENST00000378409 MAPK8IP3Q9UPT6 1336 aa20.9■□□□□ 0.94
CCDC107-204ENST00000378409 EVA1CP58658 441 aa20.9■□□□□ 0.94
CCDC107-204ENST00000378409 DLG5Q8TDM6 1919 aa20.9■□□□□ 0.94
CCDC107-204ENST00000378409 WDR17Q8IZU2 1322 aa20.89■□□□□ 0.93
CCDC107-204ENST00000378409 PLEKHF1Q96S99 279 aa20.89■□□□□ 0.93
CCDC107-204ENST00000378409 NCAPD2Q15021 1401 aa20.88■□□□□ 0.93
CCDC107-204ENST00000378409 NEFMP07197 916 aa20.88■□□□□ 0.93
CCDC107-204ENST00000378409 C8orf37Q96NL8 207 aa20.88■□□□□ 0.93
CCDC107-204ENST00000378409 APAF1O14727 1248 aa20.87■□□□□ 0.93
CCDC107-204ENST00000378409 MEX3CQ5U5Q3 659 aaKnown RBP20.87■□□□□ 0.93
CCDC107-204ENST00000378409 TOM1L2Q6ZVM7 507 aa20.87■□□□□ 0.93
CCDC107-204ENST00000378409 SLIT2O94813 1529 aa20.87■□□□□ 0.93
CCDC107-204ENST00000378409 LARP1Q6PKG0 1096 aaKnown RBP20.86■□□□□ 0.93
CCDC107-204ENST00000378409 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
CCDC107-204ENST00000378409 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.85■□□□□ 0.93
CCDC107-204ENST00000378409 TCP11L2Q8N4U5 519 aa20.85■□□□□ 0.93
CCDC107-204ENST00000378409 RGS17Q9UGC6 210 aaPredicted RBP20.85■□□□□ 0.93
CCDC107-204ENST00000378409 CRB1P82279 1406 aa20.85■□□□□ 0.93
CCDC107-204ENST00000378409 PARP4Q9UKK3 1724 aaKnown RBP20.84■□□□□ 0.93
CCDC107-204ENST00000378409 WNK3Q9BYP7 1800 aa20.84■□□□□ 0.93
CCDC107-204ENST00000378409 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
CCDC107-204ENST00000378409 SALL2Q9Y467 1007 aaPredicted RBP20.84■□□□□ 0.93
CCDC107-204ENST00000378409 RRP7AQ9Y3A4 280 aaKnown RBP20.83■□□□□ 0.93
CCDC107-204ENST00000378409 NEUROD2Q15784 382 aa20.81■□□□□ 0.92
CCDC107-204ENST00000378409 CARD10Q9BWT7 1032 aa20.81■□□□□ 0.92
CCDC107-204ENST00000378409 ZBED9Q6R2W3 1325 aa20.8■□□□□ 0.92
CCDC107-204ENST00000378409 RAPGEF4Q8WZA2 1011 aa20.8■□□□□ 0.92
CCDC107-204ENST00000378409 VIRMAQ69YN4 1812 aaKnown RBP20.8■□□□□ 0.92
CCDC107-204ENST00000378409 MEGF6O75095 1541 aa20.79■□□□□ 0.92
CCDC107-204ENST00000378409 PKD1L3Q7Z443 1732 aa20.79■□□□□ 0.92
CCDC107-204ENST00000378409 TMPOP42166 694 aaKnown RBP20.79■□□□□ 0.92
CCDC107-204ENST00000378409 NFE2L2Q16236 605 aa20.79■□□□□ 0.92
CCDC107-204ENST00000378409 UNC5CLQ8IV45 518 aa20.79■□□□□ 0.92
CCDC107-204ENST00000378409 FNBP4Q8N3X1 1017 aaPredicted RBP20.79■□□□□ 0.92
CCDC107-204ENST00000378409 USP35Q9P2H5 1018 aa20.79■□□□□ 0.92
CCDC107-204ENST00000378409 BCL9LQ86UU0 1499 aa20.79■□□□□ 0.92
CCDC107-204ENST00000378409 TATP17735 454 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms