RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 USP54Q70EL1 1684 aa27.45■■□□□ 1.98
CBWD3-204ENST00000377349 OVOS2A0A0G2JMS6 1433 aa27.43■■□□□ 1.98
CBWD3-204ENST00000377349 OVOS2A0A0J9YW53 1432 aa27.43■■□□□ 1.98
CBWD3-204ENST00000377349 OVOS2Q6IE36 1432 aa27.43■■□□□ 1.98
CBWD3-204ENST00000377349 ARHGEF25Q86VW2 580 aa27.42■■□□□ 1.98
CBWD3-204ENST00000377349 ZNF692Q9BU19 519 aaPredicted RBP27.41■■□□□ 1.98
CBWD3-204ENST00000377349 WDR17Q8IZU2 1322 aa27.41■■□□□ 1.98
CBWD3-204ENST00000377349 SBNO2Q9Y2G9 1366 aa27.4■■□□□ 1.98
CBWD3-204ENST00000377349 TTC21AQ8NDW8 1320 aa27.4■■□□□ 1.98
CBWD3-204ENST00000377349 TOM1L2Q6ZVM7 507 aa27.38■■□□□ 1.97
CBWD3-204ENST00000377349 CD163L1Q9NR16 1453 aa27.38■■□□□ 1.97
CBWD3-204ENST00000377349 LTN1O94822 1766 aa27.37■■□□□ 1.97
CBWD3-204ENST00000377349 ABCC6O95255 1503 aa27.37■■□□□ 1.97
CBWD3-204ENST00000377349 KTN1Q86UP2 1357 aaKnown RBP27.36■■□□□ 1.97
CBWD3-204ENST00000377349 C11orf95C9JLR9 678 aaPredicted RBP27.36■■□□□ 1.97
CBWD3-204ENST00000377349 DDB1Q16531 1140 aa27.36■■□□□ 1.97
CBWD3-204ENST00000377349 KCNH5Q8NCM2 988 aa27.36■■□□□ 1.97
CBWD3-204ENST00000377349 PTF1AQ7RTS3 328 aa27.34■■□□□ 1.97
CBWD3-204ENST00000377349 BCL9O00512 1426 aa27.34■■□□□ 1.97
CBWD3-204ENST00000377349 SOX12O15370 315 aa27.33■■□□□ 1.97
CBWD3-204ENST00000377349 MARCH10Q8NA82 808 aaPredicted RBP27.33■■□□□ 1.96
CBWD3-204ENST00000377349 CARD10Q9BWT7 1032 aa27.32■■□□□ 1.96
CBWD3-204ENST00000377349 CASZ1Q86V15 1759 aa27.31■■□□□ 1.96
CBWD3-204ENST00000377349 USP31Q70CQ4 1352 aa27.31■■□□□ 1.96
CBWD3-204ENST00000377349 PLSCR1O15162 318 aa27.3■■□□□ 1.96
CBWD3-204ENST00000377349 NBPF14Q5TI25 921 aa27.3■■□□□ 1.96
CBWD3-204ENST00000377349 CDCA7Q9BWT1 371 aaPredicted RBP27.29■■□□□ 1.96
CBWD3-204ENST00000377349 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
CBWD3-204ENST00000377349 BCL11BQ9C0K0 894 aaPredicted RBP27.27■■□□□ 1.96
CBWD3-204ENST00000377349 CARD11Q9BXL7 1154 aa27.26■■□□□ 1.95
CBWD3-204ENST00000377349 KAT6BQ8WYB5 2073 aa27.26■■□□□ 1.95
CBWD3-204ENST00000377349 ANO8Q9HCE9 1232 aaPredicted RBP27.25■■□□□ 1.95
CBWD3-204ENST00000377349 CCDC7Q96M83 1385 aa27.25■■□□□ 1.95
CBWD3-204ENST00000377349 CSB-PGBD3P0DP91 1061 aa27.24■■□□□ 1.95
CBWD3-204ENST00000377349 NME9Q86XW9 330 aa27.24■■□□□ 1.95
CBWD3-204ENST00000377349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.24■■□□□ 1.95
CBWD3-204ENST00000377349 PROM2Q8N271 834 aa27.24■■□□□ 1.95
CBWD3-204ENST00000377349 TNS2Q63HR2 1409 aa27.24■■□□□ 1.95
CBWD3-204ENST00000377349 NHSQ6T4R5 1651 aa27.24■■□□□ 1.95
CBWD3-204ENST00000377349 TONSLQ96HA7 1378 aa27.23■■□□□ 1.95
CBWD3-204ENST00000377349 ERBB3P21860 1342 aa27.22■■□□□ 1.95
CBWD3-204ENST00000377349 EDC4Q6P2E9 1401 aaKnown RBP27.21■■□□□ 1.95
CBWD3-204ENST00000377349 SLC12A5Q9H2X9 1139 aa27.21■■□□□ 1.95
CBWD3-204ENST00000377349 A0A1W2PP64 1363 aa27.2■■□□□ 1.94
CBWD3-204ENST00000377349 EXOC5O00471 708 aa27.18■■□□□ 1.94
CBWD3-204ENST00000377349 KCNQ2O43526 872 aa27.18■■□□□ 1.94
CBWD3-204ENST00000377349 SPON1Q9HCB6 807 aa27.18■■□□□ 1.94
CBWD3-204ENST00000377349 TMC1Q8TDI8 760 aa27.17■■□□□ 1.94
CBWD3-204ENST00000377349 BTAF1O14981 1849 aa27.17■■□□□ 1.94
CBWD3-204ENST00000377349 PDGFDQ9GZP0 370 aaPredicted RBP27.16■■□□□ 1.94
CBWD3-204ENST00000377349 HDGFL2Q7Z4V5 671 aaPredicted RBP27.15■■□□□ 1.94
CBWD3-204ENST00000377349 PUS7Q96PZ0 661 aaKnown RBP27.15■■□□□ 1.94
CBWD3-204ENST00000377349 FAM208AQ9UK61 1670 aaKnown RBP27.14■■□□□ 1.94
CBWD3-204ENST00000377349 TESK2Q96S53 571 aa27.13■■□□□ 1.93
CBWD3-204ENST00000377349 PAPPAQ13219 1627 aa27.13■■□□□ 1.93
CBWD3-204ENST00000377349 UTRNP46939 3433 aa27.12■■□□□ 1.93
CBWD3-204ENST00000377349 RGPD2P0DJD1 1756 aa27.12■■□□□ 1.93
CBWD3-204ENST00000377349 MYOM1P52179 1685 aa27.12■■□□□ 1.93
CBWD3-204ENST00000377349 TXNRD1Q16881 649 aa27.12■■□□□ 1.93
CBWD3-204ENST00000377349 NLRP2Q9NX02 1062 aa27.11■■□□□ 1.93
CBWD3-204ENST00000377349 NINLQ9Y2I6 1382 aa27.11■■□□□ 1.93
CBWD3-204ENST00000377349 ANKRD24Q8TF21 1146 aa27.1■■□□□ 1.93
CBWD3-204ENST00000377349 TERF2IPQ9NYB0 399 aa27.1■■□□□ 1.93
CBWD3-204ENST00000377349 IL2RBP14784 551 aa27.08■■□□□ 1.93
CBWD3-204ENST00000377349 SHANK3Q9BYB0 1731 aa27.07■■□□□ 1.92
CBWD3-204ENST00000377349 PPP1R1BQ9UD71 204 aaPredicted RBP27.07■■□□□ 1.92
CBWD3-204ENST00000377349 ST20-MTHFSA0A0A6YYL1 179 aa27.06■■□□□ 1.92
CBWD3-204ENST00000377349 ACSBG1Q96GR2 724 aa27.06■■□□□ 1.92
CBWD3-204ENST00000377349 PTGER2P43116 358 aa27.04■■□□□ 1.92
CBWD3-204ENST00000377349 SLC15A2Q16348 729 aa27.04■■□□□ 1.92
CBWD3-204ENST00000377349 IP6K1Q92551 441 aa27.04■■□□□ 1.92
CBWD3-204ENST00000377349 ZBTB7AO95365 584 aa27.03■■□□□ 1.92
CBWD3-204ENST00000377349 STK32BQ9NY57 414 aa27.02■■□□□ 1.92
CBWD3-204ENST00000377349 QSER1Q2KHR3 1735 aa27■■□□□ 1.91
CBWD3-204ENST00000377349 DOT1LQ8TEK3 1739 aa27■■□□□ 1.91
CBWD3-204ENST00000377349 MAP3K19Q56UN5 1328 aa26.99■■□□□ 1.91
CBWD3-204ENST00000377349 TUBGCP6Q96RT7 1819 aa26.99■■□□□ 1.91
CBWD3-204ENST00000377349 FBLN1P23142 703 aa26.98■■□□□ 1.91
CBWD3-204ENST00000377349 SGIP1Q9BQI5 828 aa26.97■■□□□ 1.91
CBWD3-204ENST00000377349 ATF5Q9Y2D1 282 aaPredicted RBP26.97■■□□□ 1.91
CBWD3-204ENST00000377349 ANKRD36BQ8N2N9 1353 aa26.96■■□□□ 1.91
CBWD3-204ENST00000377349 LY75O60449 1722 aa26.96■■□□□ 1.91
CBWD3-204ENST00000377349 KIF20BQ96Q89 1820 aa26.96■■□□□ 1.91
CBWD3-204ENST00000377349 LTV1Q96GA3 475 aaPredicted RBP26.96■■□□□ 1.91
CBWD3-204ENST00000377349 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
CBWD3-204ENST00000377349 YY1P25490 414 aa26.95■■□□□ 1.9
CBWD3-204ENST00000377349 HOXC9P31274 260 aa26.95■■□□□ 1.9
CBWD3-204ENST00000377349 LRRC4BQ9NT99 713 aa26.95■■□□□ 1.9
CBWD3-204ENST00000377349 COL24A1Q17RW2 1714 aa26.95■■□□□ 1.9
CBWD3-204ENST00000377349 COG3Q96JB2 828 aa26.94■■□□□ 1.9
CBWD3-204ENST00000377349 MEGF6O75095 1541 aa26.92■■□□□ 1.9
CBWD3-204ENST00000377349 ZNF827Q17R98 1081 aa26.92■■□□□ 1.9
CBWD3-204ENST00000377349 MTFR1LQ9H019 292 aa26.92■■□□□ 1.9
CBWD3-204ENST00000377349 CHD4Q14839 1912 aa26.91■■□□□ 1.9
CBWD3-204ENST00000377349 SLC24A1O60721 1099 aa26.9■■□□□ 1.9
CBWD3-204ENST00000377349 USP47Q96K76 1375 aa26.9■■□□□ 1.9
CBWD3-204ENST00000377349 DDX54Q8TDD1 881 aaKnown RBP26.9■■□□□ 1.9
CBWD3-204ENST00000377349 RTL1A6NKG5 1358 aa26.89■■□□□ 1.9
CBWD3-204ENST00000377349 NSD2O96028 1365 aa26.89■■□□□ 1.9
CBWD3-204ENST00000377349 GOLGB1Q14789 3259 aaKnown RBP26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms