RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 LMO7Q8WWI1 1683 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 MTHFSP49914 203 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 IP6K1Q92551 441 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 CFAP53Q96M91 514 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 C8orf37Q96NL8 207 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 COL18A1P39060 1754 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 NWD2Q9ULI1 1742 aa17.75■□□□□ 0.43
TIMP1-202ENST00000377017 FAM83GA6ND36 823 aa17.74■□□□□ 0.43
TIMP1-202ENST00000377017 HOXC9P31274 260 aa17.74■□□□□ 0.43
TIMP1-202ENST00000377017 NGLY1Q96IV0 654 aa17.74■□□□□ 0.43
TIMP1-202ENST00000377017 RGPD5Q99666 1765 aa17.72■□□□□ 0.43
TIMP1-202ENST00000377017 INSRP06213 1382 aa17.72■□□□□ 0.43
TIMP1-202ENST00000377017 SLIT2O94813 1529 aa17.72■□□□□ 0.43
TIMP1-202ENST00000377017 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
TIMP1-202ENST00000377017 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.42
TIMP1-202ENST00000377017 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.42
TIMP1-202ENST00000377017 EVA1CP58658 441 aa17.7■□□□□ 0.42
TIMP1-202ENST00000377017 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.69■□□□□ 0.42
TIMP1-202ENST00000377017 COL5A2P05997 1499 aaPredicted RBP17.69■□□□□ 0.42
TIMP1-202ENST00000377017 HSP90AB2PQ58FF8 381 aa17.69■□□□□ 0.42
TIMP1-202ENST00000377017 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
TIMP1-202ENST00000377017 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
TIMP1-202ENST00000377017 NRAPQ86VF7 1730 aa17.69■□□□□ 0.42
TIMP1-202ENST00000377017 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
TIMP1-202ENST00000377017 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
TIMP1-202ENST00000377017 ERBB3P21860 1342 aa17.68■□□□□ 0.42
TIMP1-202ENST00000377017 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
TIMP1-202ENST00000377017 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
TIMP1-202ENST00000377017 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
TIMP1-202ENST00000377017 USP21Q9UK80 565 aa17.67■□□□□ 0.42
TIMP1-202ENST00000377017 AFF2P51816 1311 aa17.67■□□□□ 0.42
TIMP1-202ENST00000377017 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
TIMP1-202ENST00000377017 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
TIMP1-202ENST00000377017 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
TIMP1-202ENST00000377017 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
TIMP1-202ENST00000377017 EIF4A2Q14240 407 aaKnown RBP17.65■□□□□ 0.42
TIMP1-202ENST00000377017 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
TIMP1-202ENST00000377017 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
TIMP1-202ENST00000377017 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
TIMP1-202ENST00000377017 CRB1P82279 1406 aa17.64■□□□□ 0.41
TIMP1-202ENST00000377017 TOM1L2Q6ZVM7 507 aa17.63■□□□□ 0.41
TIMP1-202ENST00000377017 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
TIMP1-202ENST00000377017 CCER2I3L3R5 266 aa17.62■□□□□ 0.41
TIMP1-202ENST00000377017 IL13P35225 146 aa17.62■□□□□ 0.41
TIMP1-202ENST00000377017 NLRP2Q9NX02 1062 aa17.62■□□□□ 0.41
TIMP1-202ENST00000377017 TRPC5Q9UL62 973 aaPredicted RBP17.62■□□□□ 0.41
TIMP1-202ENST00000377017 VPS72Q15906 364 aa17.61■□□□□ 0.41
TIMP1-202ENST00000377017 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
TIMP1-202ENST00000377017 MIER1Q8N108 512 aa17.61■□□□□ 0.41
TIMP1-202ENST00000377017 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
TIMP1-202ENST00000377017 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
TIMP1-202ENST00000377017 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
TIMP1-202ENST00000377017 RGPD1P0DJD0 1748 aa17.59■□□□□ 0.41
TIMP1-202ENST00000377017 ATRNO75882 1429 aa17.59■□□□□ 0.41
TIMP1-202ENST00000377017 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
TIMP1-202ENST00000377017 U2SURPO15042 1029 aaKnown RBP17.59■□□□□ 0.41
TIMP1-202ENST00000377017 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
TIMP1-202ENST00000377017 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
TIMP1-202ENST00000377017 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
TIMP1-202ENST00000377017 EYA1Q99502 592 aa17.58■□□□□ 0.4
TIMP1-202ENST00000377017 SPATA31A1Q5TZJ5 1347 aa17.57■□□□□ 0.4
TIMP1-202ENST00000377017 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
TIMP1-202ENST00000377017 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
TIMP1-202ENST00000377017 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
TIMP1-202ENST00000377017 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
TIMP1-202ENST00000377017 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
TIMP1-202ENST00000377017 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
TIMP1-202ENST00000377017 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
TIMP1-202ENST00000377017 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
TIMP1-202ENST00000377017 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
TIMP1-202ENST00000377017 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
TIMP1-202ENST00000377017 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
TIMP1-202ENST00000377017 CCDC184Q52MB2 194 aa17.54■□□□□ 0.4
TIMP1-202ENST00000377017 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
TIMP1-202ENST00000377017 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
TIMP1-202ENST00000377017 CDCA7Q9BWT1 371 aaPredicted RBP17.54■□□□□ 0.4
TIMP1-202ENST00000377017 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
TIMP1-202ENST00000377017 KDRP35968 1356 aa17.53■□□□□ 0.4
TIMP1-202ENST00000377017 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
TIMP1-202ENST00000377017 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
TIMP1-202ENST00000377017 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
TIMP1-202ENST00000377017 NEFMP07197 916 aa17.52■□□□□ 0.4
TIMP1-202ENST00000377017 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
TIMP1-202ENST00000377017 GLI3P10071 1580 aa17.52■□□□□ 0.39
TIMP1-202ENST00000377017 FCHSD2O94868 740 aa17.51■□□□□ 0.39
TIMP1-202ENST00000377017 HMOX1P09601 288 aa17.51■□□□□ 0.39
TIMP1-202ENST00000377017 IL2RBP14784 551 aa17.51■□□□□ 0.39
TIMP1-202ENST00000377017 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
TIMP1-202ENST00000377017 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
TIMP1-202ENST00000377017 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
TIMP1-202ENST00000377017 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
TIMP1-202ENST00000377017 RXRBP28702 533 aa17.49■□□□□ 0.39
TIMP1-202ENST00000377017 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
TIMP1-202ENST00000377017 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
TIMP1-202ENST00000377017 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
TIMP1-202ENST00000377017 MEGF6O75095 1541 aa17.48■□□□□ 0.39
TIMP1-202ENST00000377017 A0A0G2JS52 829 aa17.48■□□□□ 0.39
TIMP1-202ENST00000377017 MYT1Q01538 1121 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms