RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 ADGRB1O14514 1584 aa26.03■■□□□ 1.76
H2AFX-201ENST00000375167 USP19O94966 1318 aa26.02■■□□□ 1.76
H2AFX-201ENST00000375167 TOPAZ1Q8N9V7 1692 aa26.02■■□□□ 1.76
H2AFX-201ENST00000375167 ABTB2Q8N961 1025 aa26■■□□□ 1.75
H2AFX-201ENST00000375167 MARCH10Q8NA82 808 aaPredicted RBP25.99■■□□□ 1.75
H2AFX-201ENST00000375167 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
H2AFX-201ENST00000375167 PAPPAQ13219 1627 aa25.98■■□□□ 1.75
H2AFX-201ENST00000375167 ATP10DQ9P241 1426 aa25.98■■□□□ 1.75
H2AFX-201ENST00000375167 POLR3AO14802 1390 aaPredicted RBP25.98■■□□□ 1.75
H2AFX-201ENST00000375167 GCP02774 474 aa25.95■■□□□ 1.75
H2AFX-201ENST00000375167 TOM1L2Q6ZVM7 507 aa25.95■■□□□ 1.75
H2AFX-201ENST00000375167 CDCA7Q9BWT1 371 aaPredicted RBP25.95■■□□□ 1.75
H2AFX-201ENST00000375167 GOLGB1Q14789 3259 aaKnown RBP25.95■■□□□ 1.74
H2AFX-201ENST00000375167 GRIN3BO60391 1043 aa25.95■■□□□ 1.74
H2AFX-201ENST00000375167 POLD1P28340 1107 aa25.95■■□□□ 1.74
H2AFX-201ENST00000375167 ACEP12821 1306 aa25.94■■□□□ 1.74
H2AFX-201ENST00000375167 ZBTB7CA1YPR0 619 aa25.94■■□□□ 1.74
H2AFX-201ENST00000375167 NLRP13Q86W25 1043 aa25.94■■□□□ 1.74
H2AFX-201ENST00000375167 GPBP1L1Q9HC44 474 aaPredicted RBP25.94■■□□□ 1.74
H2AFX-201ENST00000375167 NHSQ6T4R5 1651 aa25.92■■□□□ 1.74
H2AFX-201ENST00000375167 COL24A1Q17RW2 1714 aa25.89■■□□□ 1.74
H2AFX-201ENST00000375167 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
H2AFX-201ENST00000375167 NLGN2Q8NFZ4 835 aa25.88■■□□□ 1.73
H2AFX-201ENST00000375167 SLC16A10Q8TF71 515 aa25.88■■□□□ 1.73
H2AFX-201ENST00000375167 QSER1Q2KHR3 1735 aa25.87■■□□□ 1.73
H2AFX-201ENST00000375167 ARHGEF28Q8N1W1 1705 aaKnown RBP25.87■■□□□ 1.73
H2AFX-201ENST00000375167 MPHOSPH9Q99550 1183 aa25.87■■□□□ 1.73
H2AFX-201ENST00000375167 WDR17Q8IZU2 1322 aa25.86■■□□□ 1.73
H2AFX-201ENST00000375167 YBX3P16989 372 aaKnown RBP eCLIP25.85■■□□□ 1.736e-13■□□□□ 10.1
H2AFX-201ENST00000375167 ZNF827Q17R98 1081 aa25.85■■□□□ 1.73
H2AFX-201ENST00000375167 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
H2AFX-201ENST00000375167 PLEKHG3A1L390 1219 aa25.82■■□□□ 1.72
H2AFX-201ENST00000375167 EXOC5O00471 708 aa25.82■■□□□ 1.72
H2AFX-201ENST00000375167 COL18A1P39060 1754 aa25.82■■□□□ 1.72
H2AFX-201ENST00000375167 BTAF1O14981 1849 aa25.82■■□□□ 1.72
H2AFX-201ENST00000375167 CDK19Q9BWU1 502 aa25.82■■□□□ 1.72
H2AFX-201ENST00000375167 BRD4O60885 1362 aaPredicted RBP25.81■■□□□ 1.72
H2AFX-201ENST00000375167 TNS2Q63HR2 1409 aa25.81■■□□□ 1.72
H2AFX-201ENST00000375167 SLIT3O75094 1523 aa25.8■■□□□ 1.72
H2AFX-201ENST00000375167 ZNF526Q8TF50 670 aaPredicted RBP25.8■■□□□ 1.72
H2AFX-201ENST00000375167 ADCY9O60503 1353 aa25.79■■□□□ 1.72
H2AFX-201ENST00000375167 ACSBG1Q96GR2 724 aa25.77■■□□□ 1.72
H2AFX-201ENST00000375167 CARD10Q9BWT7 1032 aa25.77■■□□□ 1.72
H2AFX-201ENST00000375167 ABCC6O95255 1503 aa25.75■■□□□ 1.71
H2AFX-201ENST00000375167 USP6P35125 1406 aa25.75■■□□□ 1.71
H2AFX-201ENST00000375167 CAPN15O75808 1086 aa25.75■■□□□ 1.71
H2AFX-201ENST00000375167 CSB-PGBD3P0DP91 1061 aa25.75■■□□□ 1.71
H2AFX-201ENST00000375167 APLP1P51693 650 aa25.75■■□□□ 1.71
H2AFX-201ENST00000375167 NLRP6P59044 892 aa25.74■■□□□ 1.71
H2AFX-201ENST00000375167 AKT1S1Q96B36 256 aa25.74■■□□□ 1.71
H2AFX-201ENST00000375167 TUBGCP6Q96RT7 1819 aa25.74■■□□□ 1.71
H2AFX-201ENST00000375167 RGPD5Q99666 1765 aa25.74■■□□□ 1.71
H2AFX-201ENST00000375167 CPSF1Q10570 1443 aaKnown RBP25.74■■□□□ 1.71
H2AFX-201ENST00000375167 TRPM1Q7Z4N2 1603 aa25.73■■□□□ 1.71
H2AFX-201ENST00000375167 PNPLA7Q6ZV29 1317 aa25.73■■□□□ 1.71
H2AFX-201ENST00000375167 LRRC4BQ9NT99 713 aa25.73■■□□□ 1.71
H2AFX-201ENST00000375167 AXIN2Q9Y2T1 843 aa25.73■■□□□ 1.71
H2AFX-201ENST00000375167 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
H2AFX-201ENST00000375167 KAT6BQ8WYB5 2073 aa25.71■■□□□ 1.71
H2AFX-201ENST00000375167 PPIP5K1Q6PFW1 1433 aa25.7■■□□□ 1.71
H2AFX-201ENST00000375167 TFCP2L1Q9NZI6 479 aa25.69■■□□□ 1.7
H2AFX-201ENST00000375167 SLC27A3Q5K4L6 730 aa25.68■■□□□ 1.7
H2AFX-201ENST00000375167 KDM2AQ9Y2K7 1162 aa25.66■■□□□ 1.7
H2AFX-201ENST00000375167 PIK3C2AO00443 1686 aa25.66■■□□□ 1.7
H2AFX-201ENST00000375167 COL13A1Q5TAT6 717 aaPredicted RBP25.65■■□□□ 1.7
H2AFX-201ENST00000375167 KIF3CO14782 793 aa25.64■■□□□ 1.69
H2AFX-201ENST00000375167 DNAJC5GQ8N7S2 189 aa25.64■■□□□ 1.69
H2AFX-201ENST00000375167 QRICH2Q9H0J4 1663 aa25.62■■□□□ 1.69
H2AFX-201ENST00000375167 PRELPP51888 382 aa25.62■■□□□ 1.69
H2AFX-201ENST00000375167 ARHGEF25Q86VW2 580 aa25.62■■□□□ 1.69
H2AFX-201ENST00000375167 SRPK2P78362 688 aaKnown RBP25.61■■□□□ 1.69
H2AFX-201ENST00000375167 TNS4Q8IZW8 715 aa25.61■■□□□ 1.69
H2AFX-201ENST00000375167 DCAF11Q8TEB1 546 aa25.61■■□□□ 1.69
H2AFX-201ENST00000375167 KCNH5Q8NCM2 988 aa25.59■■□□□ 1.69
H2AFX-201ENST00000375167 WDR90Q96KV7 1748 aa25.59■■□□□ 1.69
H2AFX-201ENST00000375167 MSH5O43196 834 aa25.58■■□□□ 1.69
H2AFX-201ENST00000375167 CD2APQ9Y5K6 639 aa25.58■■□□□ 1.69
H2AFX-201ENST00000375167 STAC3Q96MF2 364 aa25.57■■□□□ 1.68
H2AFX-201ENST00000375167 SOX12O15370 315 aa25.55■■□□□ 1.68
H2AFX-201ENST00000375167 TOMM70O94826 608 aa25.54■■□□□ 1.68
H2AFX-201ENST00000375167 IL2RBP14784 551 aa25.54■■□□□ 1.68
H2AFX-201ENST00000375167 LY75O60449 1722 aa25.52■■□□□ 1.68
H2AFX-201ENST00000375167 MSL1Q68DK7 614 aa25.52■■□□□ 1.68
H2AFX-201ENST00000375167 KCNQ4P56696 695 aa25.51■■□□□ 1.67
H2AFX-201ENST00000375167 CABP2Q9NPB3 220 aa25.51■■□□□ 1.67
H2AFX-201ENST00000375167 NFAT5O94916 1531 aa25.51■■□□□ 1.67
H2AFX-201ENST00000375167 NLRP2Q9NX02 1062 aa25.5■■□□□ 1.67
H2AFX-201ENST00000375167 KLRG1Q96E93 195 aa25.49■■□□□ 1.67
H2AFX-201ENST00000375167 CABP1Q9NZU7 370 aa25.49■■□□□ 1.67
H2AFX-201ENST00000375167 COL23A1Q86Y22 540 aaPredicted RBP25.48■■□□□ 1.67
H2AFX-201ENST00000375167 JMYQ8N9B5 988 aa25.48■■□□□ 1.67
H2AFX-201ENST00000375167 ERBB3P21860 1342 aa25.46■■□□□ 1.67
H2AFX-201ENST00000375167 IGSF1Q8N6C5 1336 aa25.45■■□□□ 1.66
H2AFX-201ENST00000375167 SYTL4Q96C24 671 aaPredicted RBP25.44■■□□□ 1.66
H2AFX-201ENST00000375167 CCNL1Q9UK58 526 aaPredicted RBP25.44■■□□□ 1.66
H2AFX-201ENST00000375167 DOT1LQ8TEK3 1739 aa25.44■■□□□ 1.66
H2AFX-201ENST00000375167 KIAA1210Q9ULL0 1709 aa25.44■■□□□ 1.66
H2AFX-201ENST00000375167 CICQ96RK0 1608 aaPredicted RBP25.44■■□□□ 1.66
H2AFX-201ENST00000375167 SLC34A2O95436 690 aa25.44■■□□□ 1.66
H2AFX-201ENST00000375167 TTC21BQ7Z4L5 1316 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms