RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 SPATA31A5Q5VU36 1347 aa28.91■■■□□ 2.22
MAP1LC3A-202ENST00000374837 SPATA31A7Q8IWB4 1347 aa28.91■■■□□ 2.22
MAP1LC3A-202ENST00000374837 NRAPQ86VF7 1730 aa28.9■■■□□ 2.22
MAP1LC3A-202ENST00000374837 LARP1Q6PKG0 1096 aaKnown RBP28.89■■■□□ 2.22
MAP1LC3A-202ENST00000374837 LMO7Q8WWI1 1683 aa28.89■■■□□ 2.21
MAP1LC3A-202ENST00000374837 GLI3P10071 1580 aa28.88■■■□□ 2.21
MAP1LC3A-202ENST00000374837 COL5A2P05997 1499 aaPredicted RBP28.86■■■□□ 2.21
MAP1LC3A-202ENST00000374837 ONECUT3O60422 494 aaPredicted RBP28.86■■■□□ 2.21
MAP1LC3A-202ENST00000374837 SPATA31A1Q5TZJ5 1347 aa28.86■■■□□ 2.21
MAP1LC3A-202ENST00000374837 FAM98CQ17RN3 349 aaKnown RBP28.84■■■□□ 2.21
MAP1LC3A-202ENST00000374837 COL18A1P39060 1754 aa28.83■■■□□ 2.21
MAP1LC3A-202ENST00000374837 SEPT12Q8IYM1 358 aa28.83■■■□□ 2.21
MAP1LC3A-202ENST00000374837 USP35Q9P2H5 1018 aa28.83■■■□□ 2.21
MAP1LC3A-202ENST00000374837 KNSTRNQ9Y448 316 aa28.83■■■□□ 2.21
MAP1LC3A-202ENST00000374837 MAP3K19Q56UN5 1328 aa28.83■■■□□ 2.21
MAP1LC3A-202ENST00000374837 RRS1Q15050 365 aaKnown RBP28.81■■■□□ 2.2
MAP1LC3A-202ENST00000374837 IP6K1Q92551 441 aa28.81■■■□□ 2.2
MAP1LC3A-202ENST00000374837 WDR17Q8IZU2 1322 aa28.79■■■□□ 2.2
MAP1LC3A-202ENST00000374837 PER1O15534 1290 aaPredicted RBP28.79■■■□□ 2.2
MAP1LC3A-202ENST00000374837 CSB-PGBD3P0DP91 1061 aa28.79■■■□□ 2.2
MAP1LC3A-202ENST00000374837 AMPHP49418 695 aa28.79■■■□□ 2.2
MAP1LC3A-202ENST00000374837 TOM1L2Q6ZVM7 507 aa28.79■■■□□ 2.2
MAP1LC3A-202ENST00000374837 TCP11L2Q8N4U5 519 aa28.78■■■□□ 2.2
MAP1LC3A-202ENST00000374837 CRB1P82279 1406 aa28.77■■■□□ 2.2
MAP1LC3A-202ENST00000374837 ABCC6O95255 1503 aa28.77■■■□□ 2.2
MAP1LC3A-202ENST00000374837 KIF20BQ96Q89 1820 aa28.76■■■□□ 2.19
MAP1LC3A-202ENST00000374837 A0A0G2JS52 829 aa28.76■■■□□ 2.19
MAP1LC3A-202ENST00000374837 HOXC9P31274 260 aa28.76■■■□□ 2.19
MAP1LC3A-202ENST00000374837 MYT1Q01538 1121 aa28.76■■■□□ 2.19
MAP1LC3A-202ENST00000374837 BARGINQ6ZT62 677 aa28.76■■■□□ 2.19
MAP1LC3A-202ENST00000374837 AMER1Q5JTC6 1135 aaPredicted RBP28.75■■■□□ 2.19
MAP1LC3A-202ENST00000374837 ANKRD24Q8TF21 1146 aa28.75■■■□□ 2.19
MAP1LC3A-202ENST00000374837 THRAP3Q9Y2W1 955 aaKnown RBP28.75■■■□□ 2.19
MAP1LC3A-202ENST00000374837 ERBB3P21860 1342 aa28.74■■■□□ 2.19
MAP1LC3A-202ENST00000374837 NSD2O96028 1365 aa28.74■■■□□ 2.19
MAP1LC3A-202ENST00000374837 CARD10Q9BWT7 1032 aa28.73■■■□□ 2.19
MAP1LC3A-202ENST00000374837 BLMP54132 1417 aaPredicted RBP28.72■■■□□ 2.19
MAP1LC3A-202ENST00000374837 TNNT2P45379 298 aaPredicted RBP28.72■■■□□ 2.19
MAP1LC3A-202ENST00000374837 MORC1Q86VD1 984 aa28.71■■■□□ 2.19
MAP1LC3A-202ENST00000374837 LTV1Q96GA3 475 aaPredicted RBP28.71■■■□□ 2.19
MAP1LC3A-202ENST00000374837 EMILIN1Q9Y6C2 1016 aa28.71■■■□□ 2.19
MAP1LC3A-202ENST00000374837 CCDC125Q86Z20 511 aa28.7■■■□□ 2.18
MAP1LC3A-202ENST00000374837 NLRP2Q9NX02 1062 aa28.7■■■□□ 2.18
MAP1LC3A-202ENST00000374837 LTN1O94822 1766 aa28.7■■■□□ 2.18
MAP1LC3A-202ENST00000374837 KRT27Q7Z3Y8 459 aa28.69■■■□□ 2.18
MAP1LC3A-202ENST00000374837 RTL1A6NKG5 1358 aa28.69■■■□□ 2.18
MAP1LC3A-202ENST00000374837 POLKQ9UBT6 870 aa28.68■■■□□ 2.18
MAP1LC3A-202ENST00000374837 HSP90AB2PQ58FF8 381 aa28.67■■■□□ 2.18
MAP1LC3A-202ENST00000374837 EP400Q96L91 3159 aa28.67■■■□□ 2.18
MAP1LC3A-202ENST00000374837 RGPD5Q99666 1765 aa28.67■■■□□ 2.18
MAP1LC3A-202ENST00000374837 KIF24Q5T7B8 1368 aa28.66■■■□□ 2.18
MAP1LC3A-202ENST00000374837 PPM1GO15355 546 aaPredicted RBP28.66■■■□□ 2.18
MAP1LC3A-202ENST00000374837 FLT4P35916 1363 aa28.65■■■□□ 2.18
MAP1LC3A-202ENST00000374837 CC2D1BQ5T0F9 858 aaKnown RBP28.64■■■□□ 2.18
MAP1LC3A-202ENST00000374837 INSRP06213 1382 aa28.63■■■□□ 2.17
MAP1LC3A-202ENST00000374837 THSD7AQ9UPZ6 1657 aa28.63■■■□□ 2.17
MAP1LC3A-202ENST00000374837 CDCA7Q9BWT1 371 aaPredicted RBP28.61■■■□□ 2.17
MAP1LC3A-202ENST00000374837 NPC1L1Q9UHC9 1359 aa28.6■■■□□ 2.17
MAP1LC3A-202ENST00000374837 PDE3BQ13370 1112 aa28.59■■■□□ 2.17
MAP1LC3A-202ENST00000374837 CNGB1Q14028 1251 aaPredicted RBP28.59■■■□□ 2.17
MAP1LC3A-202ENST00000374837 PEAK1Q9H792 1746 aa28.59■■■□□ 2.17
MAP1LC3A-202ENST00000374837 ANKRD26Q9UPS8 1709 aa28.58■■■□□ 2.17
MAP1LC3A-202ENST00000374837 FAM182BQ5T319 152 aa28.58■■■□□ 2.17
MAP1LC3A-202ENST00000374837 NBPF6Q5VWK0 638 aa28.57■■■□□ 2.16
MAP1LC3A-202ENST00000374837 NBPF4Q96M43 638 aa28.57■■■□□ 2.16
MAP1LC3A-202ENST00000374837 DISP2A7MBM2 1401 aa28.57■■■□□ 2.16
MAP1LC3A-202ENST00000374837 BRWD3Q6RI45 1802 aa28.57■■■□□ 2.16
MAP1LC3A-202ENST00000374837 DDB1Q16531 1140 aa28.56■■■□□ 2.16
MAP1LC3A-202ENST00000374837 SMG6Q86US8 1419 aaKnown RBP28.54■■■□□ 2.16
MAP1LC3A-202ENST00000374837 IL2RBP14784 551 aa28.54■■■□□ 2.16
MAP1LC3A-202ENST00000374837 EXOC5O00471 708 aa28.52■■■□□ 2.16
MAP1LC3A-202ENST00000374837 USHBP1Q8N6Y0 703 aa28.52■■■□□ 2.16
MAP1LC3A-202ENST00000374837 DDX10Q13206 875 aaKnown RBP28.5■■■□□ 2.15
MAP1LC3A-202ENST00000374837 MAP2P11137 1827 aaKnown RBP28.5■■■□□ 2.15
MAP1LC3A-202ENST00000374837 EIF4A2Q14240 407 aaKnown RBP28.49■■■□□ 2.15
MAP1LC3A-202ENST00000374837 FAM196AQ6ZSG2 479 aa28.49■■■□□ 2.15
MAP1LC3A-202ENST00000374837 MTHFSP49914 203 aa28.48■■■□□ 2.15
MAP1LC3A-202ENST00000374837 DEFB132Q7Z7B7 95 aa28.48■■■□□ 2.15
MAP1LC3A-202ENST00000374837 PARP4Q9UKK3 1724 aaKnown RBP28.47■■■□□ 2.15
MAP1LC3A-202ENST00000374837 MARCH10Q8NA82 808 aaPredicted RBP28.47■■■□□ 2.15
MAP1LC3A-202ENST00000374837 EYA1Q99502 592 aa28.47■■■□□ 2.15
MAP1LC3A-202ENST00000374837 SF3B2Q13435 895 aaKnown RBP28.45■■■□□ 2.14
MAP1LC3A-202ENST00000374837 FAM208AQ9UK61 1670 aaKnown RBP28.45■■■□□ 2.14
MAP1LC3A-202ENST00000374837 LRRC37A3O60309 1634 aa28.43■■■□□ 2.14
MAP1LC3A-202ENST00000374837 RAPGEF4Q8WZA2 1011 aa28.42■■■□□ 2.14
MAP1LC3A-202ENST00000374837 TNS2Q63HR2 1409 aa28.41■■■□□ 2.14
MAP1LC3A-202ENST00000374837 WNK3Q9BYP7 1800 aa28.41■■■□□ 2.14
MAP1LC3A-202ENST00000374837 RGPD2P0DJD1 1756 aa28.4■■■□□ 2.14
MAP1LC3A-202ENST00000374837 MEGF6O75095 1541 aa28.4■■■□□ 2.14
MAP1LC3A-202ENST00000374837 TATP17735 454 aaPredicted RBP28.4■■■□□ 2.14
MAP1LC3A-202ENST00000374837 TRIM37O94972 964 aa28.39■■■□□ 2.14
MAP1LC3A-202ENST00000374837 IL13P35225 146 aa28.39■■■□□ 2.14
MAP1LC3A-202ENST00000374837 ZCRB1Q8TBF4 217 aaKnown RBP28.39■■■□□ 2.14
MAP1LC3A-202ENST00000374837 OVOS2A0A0G2JMS6 1433 aa28.38■■■□□ 2.13
MAP1LC3A-202ENST00000374837 NCAPD2Q15021 1401 aa28.38■■■□□ 2.13
MAP1LC3A-202ENST00000374837 ZNF316A6NFI3 1004 aaPredicted RBP28.37■■■□□ 2.13
MAP1LC3A-202ENST00000374837 DDX54Q8TDD1 881 aaKnown RBP28.37■■■□□ 2.13
MAP1LC3A-202ENST00000374837 PPP2R1AP30153 589 aa28.36■■■□□ 2.13
MAP1LC3A-202ENST00000374837 IGSF1Q8N6C5 1336 aa28.36■■■□□ 2.13
MAP1LC3A-202ENST00000374837 BCL9O00512 1426 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms