RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
HLA-DOA-202ENST00000374813 GRIN3BO60391 1043 aa13.9□□□□□ -0.18
HLA-DOA-202ENST00000374813 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
HLA-DOA-202ENST00000374813 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
HLA-DOA-202ENST00000374813 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
HLA-DOA-202ENST00000374813 USP19O94966 1318 aa13.9□□□□□ -0.19
HLA-DOA-202ENST00000374813 ACEP12821 1306 aa13.9□□□□□ -0.19
HLA-DOA-202ENST00000374813 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
HLA-DOA-202ENST00000374813 POLD1P28340 1107 aa13.89□□□□□ -0.19
HLA-DOA-202ENST00000374813 PLEKHG3A1L390 1219 aa13.88□□□□□ -0.19
HLA-DOA-202ENST00000374813 HSPA6P17066 643 aa13.88□□□□□ -0.19
HLA-DOA-202ENST00000374813 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
HLA-DOA-202ENST00000374813 SLC16A10Q8TF71 515 aa13.88□□□□□ -0.19
HLA-DOA-202ENST00000374813 EXOC5O00471 708 aa13.87□□□□□ -0.19
HLA-DOA-202ENST00000374813 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
HLA-DOA-202ENST00000374813 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
HLA-DOA-202ENST00000374813 ADGRB1O14514 1584 aa13.86□□□□□ -0.19
HLA-DOA-202ENST00000374813 LRRC37A3O60309 1634 aa13.86□□□□□ -0.19
HLA-DOA-202ENST00000374813 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
HLA-DOA-202ENST00000374813 AKAP12Q02952 1782 aa13.85□□□□□ -0.19
HLA-DOA-202ENST00000374813 SHANK3Q9BYB0 1731 aa13.84□□□□□ -0.19
HLA-DOA-202ENST00000374813 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
HLA-DOA-202ENST00000374813 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
HLA-DOA-202ENST00000374813 WDR17Q8IZU2 1322 aa13.84□□□□□ -0.19
HLA-DOA-202ENST00000374813 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
HLA-DOA-202ENST00000374813 KAT6BQ8WYB5 2073 aa13.83□□□□□ -0.2
HLA-DOA-202ENST00000374813 CARD10Q9BWT7 1032 aa13.82□□□□□ -0.2
HLA-DOA-202ENST00000374813 NLRP6P59044 892 aa13.81□□□□□ -0.2
HLA-DOA-202ENST00000374813 ATP10DQ9P241 1426 aa13.8□□□□□ -0.2
HLA-DOA-202ENST00000374813 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
HLA-DOA-202ENST00000374813 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
HLA-DOA-202ENST00000374813 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
HLA-DOA-202ENST00000374813 YBX3P16989 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
HLA-DOA-202ENST00000374813 ZNF827Q17R98 1081 aa13.78□□□□□ -0.2
HLA-DOA-202ENST00000374813 NLGN2Q8NFZ4 835 aa13.78□□□□□ -0.2
HLA-DOA-202ENST00000374813 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
HLA-DOA-202ENST00000374813 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
HLA-DOA-202ENST00000374813 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 PCNTO95613 3336 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 CCDC7Q96M83 1385 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 APLP1P51693 650 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 KCNH5Q8NCM2 988 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
HLA-DOA-202ENST00000374813 TOPAZ1Q8N9V7 1692 aa13.75□□□□□ -0.21
HLA-DOA-202ENST00000374813 USP6P35125 1406 aa13.75□□□□□ -0.21
HLA-DOA-202ENST00000374813 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
HLA-DOA-202ENST00000374813 COL18A1P39060 1754 aa13.74□□□□□ -0.21
HLA-DOA-202ENST00000374813 COL24A1Q17RW2 1714 aa13.74□□□□□ -0.21
HLA-DOA-202ENST00000374813 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-202ENST00000374813 ARHGEF25Q86VW2 580 aa13.74□□□□□ -0.21
HLA-DOA-202ENST00000374813 NHSQ6T4R5 1651 aa13.74□□□□□ -0.21
HLA-DOA-202ENST00000374813 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
HLA-DOA-202ENST00000374813 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
HLA-DOA-202ENST00000374813 ZNF526Q8TF50 670 aaPredicted RBP13.73□□□□□ -0.21
HLA-DOA-202ENST00000374813 QSER1Q2KHR3 1735 aa13.73□□□□□ -0.21
HLA-DOA-202ENST00000374813 TNS2Q63HR2 1409 aa13.73□□□□□ -0.21
HLA-DOA-202ENST00000374813 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
HLA-DOA-202ENST00000374813 SLIT3O75094 1523 aa13.72□□□□□ -0.21
HLA-DOA-202ENST00000374813 DNAJC5GQ8N7S2 189 aa13.71□□□□□ -0.21
HLA-DOA-202ENST00000374813 CD2APQ9Y5K6 639 aa13.71□□□□□ -0.21
HLA-DOA-202ENST00000374813 CPSF1Q10570 1443 aaKnown RBP13.71□□□□□ -0.22
HLA-DOA-202ENST00000374813 BTAF1O14981 1849 aa13.71□□□□□ -0.22
HLA-DOA-202ENST00000374813 ADCY9O60503 1353 aa13.7□□□□□ -0.22
HLA-DOA-202ENST00000374813 IL2RBP14784 551 aa13.69□□□□□ -0.22
HLA-DOA-202ENST00000374813 HMGB2P26583 209 aaKnown RBP13.69□□□□□ -0.22
HLA-DOA-202ENST00000374813 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
HLA-DOA-202ENST00000374813 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
HLA-DOA-202ENST00000374813 MSH5O43196 834 aa13.68□□□□□ -0.22
HLA-DOA-202ENST00000374813 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
HLA-DOA-202ENST00000374813 KIF3CO14782 793 aa13.67□□□□□ -0.22
HLA-DOA-202ENST00000374813 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
HLA-DOA-202ENST00000374813 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
HLA-DOA-202ENST00000374813 ABCC6O95255 1503 aa13.67□□□□□ -0.22
HLA-DOA-202ENST00000374813 TOMM70O94826 608 aa13.66□□□□□ -0.22
HLA-DOA-202ENST00000374813 PRELPP51888 382 aa13.66□□□□□ -0.22
HLA-DOA-202ENST00000374813 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
HLA-DOA-202ENST00000374813 SOX12O15370 315 aa13.65□□□□□ -0.22
HLA-DOA-202ENST00000374813 CAPN15O75808 1086 aa13.65□□□□□ -0.22
HLA-DOA-202ENST00000374813 COL13A1Q5TAT6 717 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOA-202ENST00000374813 COL23A1Q86Y22 540 aaPredicted RBP13.63□□□□□ -0.23
HLA-DOA-202ENST00000374813 TNS4Q8IZW8 715 aa13.63□□□□□ -0.23
HLA-DOA-202ENST00000374813 TTC21BQ7Z4L5 1316 aa13.63□□□□□ -0.23
HLA-DOA-202ENST00000374813 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
HLA-DOA-202ENST00000374813 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
HLA-DOA-202ENST00000374813 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
HLA-DOA-202ENST00000374813 SYTL4Q96C24 671 aaPredicted RBP13.62□□□□□ -0.23
HLA-DOA-202ENST00000374813 PIK3C2AO00443 1686 aa13.62□□□□□ -0.23
HLA-DOA-202ENST00000374813 ERBB3P21860 1342 aa13.62□□□□□ -0.23
HLA-DOA-202ENST00000374813 KCNQ4P56696 695 aa13.61□□□□□ -0.23
HLA-DOA-202ENST00000374813 JMYQ8N9B5 988 aa13.61□□□□□ -0.23
HLA-DOA-202ENST00000374813 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
HLA-DOA-202ENST00000374813 CCNL1Q9UK58 526 aaPredicted RBP13.61□□□□□ -0.23
HLA-DOA-202ENST00000374813 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
HLA-DOA-202ENST00000374813 KLRG1Q96E93 195 aa13.6□□□□□ -0.23
HLA-DOA-202ENST00000374813 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
HLA-DOA-202ENST00000374813 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
HLA-DOA-202ENST00000374813 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms