RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 PNISRQ8TF01 805 aaKnown RBP12.19□□□□□ -0.46
PTPN20-201ENST00000374218 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
PTPN20-201ENST00000374218 BLMP54132 1417 aaPredicted RBP12.19□□□□□ -0.46
PTPN20-201ENST00000374218 FAM9BQ8IZU0 186 aa12.18□□□□□ -0.46
PTPN20-201ENST00000374218 CHRNA2Q15822 529 aa12.18□□□□□ -0.46
PTPN20-201ENST00000374218 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-201ENST00000374218 EVA1CP58658 441 aa12.17□□□□□ -0.46
PTPN20-201ENST00000374218 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPN20-201ENST00000374218 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-201ENST00000374218 COL22A1Q8NFW1 1626 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-201ENST00000374218 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
PTPN20-201ENST00000374218 EIF4A2Q14240 407 aaKnown RBP12.17□□□□□ -0.46
PTPN20-201ENST00000374218 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
PTPN20-201ENST00000374218 NEFMP07197 916 aa12.16□□□□□ -0.46
PTPN20-201ENST00000374218 IL13P35225 146 aa12.16□□□□□ -0.46
PTPN20-201ENST00000374218 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
PTPN20-201ENST00000374218 ANKRD24Q8TF21 1146 aa12.16□□□□□ -0.46
PTPN20-201ENST00000374218 PHRF1Q9P1Y6 1649 aaKnown RBP12.15□□□□□ -0.46
PTPN20-201ENST00000374218 ABCC6O95255 1503 aa12.15□□□□□ -0.46
PTPN20-201ENST00000374218 MYT1Q01538 1121 aa12.15□□□□□ -0.46
PTPN20-201ENST00000374218 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
PTPN20-201ENST00000374218 NGLY1Q96IV0 654 aa12.15□□□□□ -0.46
PTPN20-201ENST00000374218 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
PTPN20-201ENST00000374218 SHPRHQ149N8 1683 aa12.15□□□□□ -0.47
PTPN20-201ENST00000374218 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
PTPN20-201ENST00000374218 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
PTPN20-201ENST00000374218 ADAMTS8Q9UP79 889 aa12.14□□□□□ -0.47
PTPN20-201ENST00000374218 ERBB3P21860 1342 aa12.14□□□□□ -0.47
PTPN20-201ENST00000374218 FCHSD2O94868 740 aa12.13□□□□□ -0.47
PTPN20-201ENST00000374218 NLRP2Q9NX02 1062 aa12.13□□□□□ -0.47
PTPN20-201ENST00000374218 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
PTPN20-201ENST00000374218 COL3A1P02461 1466 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-201ENST00000374218 STRN4Q9NRL3 753 aa12.12□□□□□ -0.47
PTPN20-201ENST00000374218 TOM1L2Q6ZVM7 507 aa12.12□□□□□ -0.47
PTPN20-201ENST00000374218 EYA1Q99502 592 aa12.12□□□□□ -0.47
PTPN20-201ENST00000374218 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
PTPN20-201ENST00000374218 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
PTPN20-201ENST00000374218 CRYBG1Q9Y4K1 1723 aa12.12□□□□□ -0.47
PTPN20-201ENST00000374218 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
PTPN20-201ENST00000374218 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
PTPN20-201ENST00000374218 HMOX1P09601 288 aa12.1□□□□□ -0.47
PTPN20-201ENST00000374218 PEAK1Q9H792 1746 aa12.1□□□□□ -0.47
PTPN20-201ENST00000374218 LTN1O94822 1766 aa12.1□□□□□ -0.47
PTPN20-201ENST00000374218 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
PTPN20-201ENST00000374218 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
PTPN20-201ENST00000374218 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
PTPN20-201ENST00000374218 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
PTPN20-201ENST00000374218 FNBP4Q8N3X1 1017 aaPredicted RBP12.09□□□□□ -0.47
PTPN20-201ENST00000374218 UNC5CLQ8IV45 518 aa12.09□□□□□ -0.47
PTPN20-201ENST00000374218 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
PTPN20-201ENST00000374218 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
PTPN20-201ENST00000374218 COL14A1Q05707 1796 aaKnown RBP12.09□□□□□ -0.47
PTPN20-201ENST00000374218 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
PTPN20-201ENST00000374218 CAMTA1Q9Y6Y1 1673 aa12.09□□□□□ -0.47
PTPN20-201ENST00000374218 PRKAR2BP31323 418 aa12.08□□□□□ -0.47
PTPN20-201ENST00000374218 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
PTPN20-201ENST00000374218 NGEFQ8N5V2 710 aa12.08□□□□□ -0.48
PTPN20-201ENST00000374218 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
PTPN20-201ENST00000374218 USP21Q9UK80 565 aa12.08□□□□□ -0.48
PTPN20-201ENST00000374218 CCDC9Q9Y3X0 531 aaKnown RBP12.08□□□□□ -0.48
PTPN20-201ENST00000374218 KDRP35968 1356 aa12.07□□□□□ -0.48
PTPN20-201ENST00000374218 CCDC146Q8IYE0 955 aa12.07□□□□□ -0.48
PTPN20-201ENST00000374218 CRB1P82279 1406 aa12.07□□□□□ -0.48
PTPN20-201ENST00000374218 TATP17735 454 aaPredicted RBP12.06□□□□□ -0.48
PTPN20-201ENST00000374218 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
PTPN20-201ENST00000374218 USHBP1Q8N6Y0 703 aa12.06□□□□□ -0.48
PTPN20-201ENST00000374218 SLIT2O94813 1529 aa12.06□□□□□ -0.48
PTPN20-201ENST00000374218 LRP6O75581 1613 aa12.06□□□□□ -0.48
PTPN20-201ENST00000374218 COL18A1P39060 1754 aa12.06□□□□□ -0.48
PTPN20-201ENST00000374218 LMO7Q8WWI1 1683 aa12.05□□□□□ -0.48
PTPN20-201ENST00000374218 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
PTPN20-201ENST00000374218 AMOTQ4VCS5 1084 aa12.05□□□□□ -0.48
PTPN20-201ENST00000374218 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
PTPN20-201ENST00000374218 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
PTPN20-201ENST00000374218 AFF2P51816 1311 aa12.05□□□□□ -0.48
PTPN20-201ENST00000374218 PLEKHO1Q53GL0 409 aaPredicted RBP12.05□□□□□ -0.48
PTPN20-201ENST00000374218 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
PTPN20-201ENST00000374218 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
PTPN20-201ENST00000374218 VPS72Q15906 364 aa12.04□□□□□ -0.48
PTPN20-201ENST00000374218 GAS2L2Q8NHY3 880 aa12.04□□□□□ -0.48
PTPN20-201ENST00000374218 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
PTPN20-201ENST00000374218 PLEKHF1Q96S99 279 aa12.04□□□□□ -0.48
PTPN20-201ENST00000374218 APAF1O14727 1248 aa12.04□□□□□ -0.48
PTPN20-201ENST00000374218 TRPC5Q9UL62 973 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-201ENST00000374218 PLEKHG2Q9H7P9 1386 aa12.04□□□□□ -0.48
PTPN20-201ENST00000374218 IL2RBP14784 551 aa12.04□□□□□ -0.48
PTPN20-201ENST00000374218 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-201ENST00000374218 SPG7Q9UQ90 795 aa12.04□□□□□ -0.48
PTPN20-201ENST00000374218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN20-201ENST00000374218 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
PTPN20-201ENST00000374218 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
PTPN20-201ENST00000374218 SPATA31A1Q5TZJ5 1347 aa12.03□□□□□ -0.48
PTPN20-201ENST00000374218 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
PTPN20-201ENST00000374218 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
PTPN20-201ENST00000374218 NCAPD2Q15021 1401 aa12.02□□□□□ -0.48
PTPN20-201ENST00000374218 NFE2L2Q16236 605 aa12.02□□□□□ -0.48
PTPN20-201ENST00000374218 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.48
PTPN20-201ENST00000374218 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
PTPN20-201ENST00000374218 FAM208AQ9UK61 1670 aaKnown RBP12.02□□□□□ -0.49
PTPN20-201ENST00000374218 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms