RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
HDAC8-204ENST00000373560 GPR162Q16538 588 aa18.67■□□□□ 0.58
HDAC8-204ENST00000373560 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
HDAC8-204ENST00000373560 ANKRD30BQ9BXX2 1392 aa18.67■□□□□ 0.58
HDAC8-204ENST00000373560 EVA1CP58658 441 aa18.66■□□□□ 0.58
HDAC8-204ENST00000373560 ARXQ96QS3 562 aa18.66■□□□□ 0.58
HDAC8-204ENST00000373560 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
HDAC8-204ENST00000373560 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
HDAC8-204ENST00000373560 SLC15A2Q16348 729 aa18.65■□□□□ 0.58
HDAC8-204ENST00000373560 TOPAZ1Q8N9V7 1692 aa18.64■□□□□ 0.57
HDAC8-204ENST00000373560 ITSN1Q15811 1721 aa18.64■□□□□ 0.57
HDAC8-204ENST00000373560 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
HDAC8-204ENST00000373560 STK32BQ9NY57 414 aa18.64■□□□□ 0.57
HDAC8-204ENST00000373560 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
HDAC8-204ENST00000373560 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
HDAC8-204ENST00000373560 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
HDAC8-204ENST00000373560 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
HDAC8-204ENST00000373560 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
HDAC8-204ENST00000373560 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
HDAC8-204ENST00000373560 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
HDAC8-204ENST00000373560 ADGRB1O14514 1584 aa18.6■□□□□ 0.57
HDAC8-204ENST00000373560 HSPA6P17066 643 aa18.6■□□□□ 0.57
HDAC8-204ENST00000373560 NLGN2Q8NFZ4 835 aa18.59■□□□□ 0.57
HDAC8-204ENST00000373560 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
HDAC8-204ENST00000373560 CRB1P82279 1406 aa18.58■□□□□ 0.57
HDAC8-204ENST00000373560 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
HDAC8-204ENST00000373560 CPDO75976 1380 aa18.58■□□□□ 0.57
HDAC8-204ENST00000373560 KLHL34Q8N239 644 aa18.58■□□□□ 0.56
HDAC8-204ENST00000373560 MARCH10Q8NA82 808 aaPredicted RBP18.58■□□□□ 0.56
HDAC8-204ENST00000373560 POGKQ9P215 609 aa18.58■□□□□ 0.56
HDAC8-204ENST00000373560 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDAC8-204ENST00000373560 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
HDAC8-204ENST00000373560 ZNF827Q17R98 1081 aa18.55■□□□□ 0.56
HDAC8-204ENST00000373560 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
HDAC8-204ENST00000373560 DDB1Q16531 1140 aa18.54■□□□□ 0.56
HDAC8-204ENST00000373560 BCL9O00512 1426 aa18.54■□□□□ 0.56
HDAC8-204ENST00000373560 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
HDAC8-204ENST00000373560 USP19O94966 1318 aa18.53■□□□□ 0.56
HDAC8-204ENST00000373560 COL18A1P39060 1754 aa18.53■□□□□ 0.56
HDAC8-204ENST00000373560 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-204ENST00000373560 WASLO00401 505 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-204ENST00000373560 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.56
HDAC8-204ENST00000373560 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
HDAC8-204ENST00000373560 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
HDAC8-204ENST00000373560 BTAF1O14981 1849 aa18.51■□□□□ 0.55
HDAC8-204ENST00000373560 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
HDAC8-204ENST00000373560 ZNF526Q8TF50 670 aaPredicted RBP18.5■□□□□ 0.55
HDAC8-204ENST00000373560 ADCY9O60503 1353 aa18.5■□□□□ 0.55
HDAC8-204ENST00000373560 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
HDAC8-204ENST00000373560 POLR3AO14802 1390 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-204ENST00000373560 ZBTB7CA1YPR0 619 aa18.47■□□□□ 0.55
HDAC8-204ENST00000373560 COL13A1Q5TAT6 717 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-204ENST00000373560 NUDT16Q96DE0 195 aaKnown RBP18.46■□□□□ 0.55
HDAC8-204ENST00000373560 GPBP1L1Q9HC44 474 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-204ENST00000373560 ACEP12821 1306 aa18.46■□□□□ 0.55
HDAC8-204ENST00000373560 GCP02774 474 aa18.45■□□□□ 0.54
HDAC8-204ENST00000373560 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
HDAC8-204ENST00000373560 SLIT3O75094 1523 aa18.44■□□□□ 0.54
HDAC8-204ENST00000373560 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
HDAC8-204ENST00000373560 ABTB2Q8N961 1025 aa18.43■□□□□ 0.54
HDAC8-204ENST00000373560 ACSBG1Q96GR2 724 aa18.42■□□□□ 0.54
HDAC8-204ENST00000373560 DNAJC5GQ8N7S2 189 aa18.41■□□□□ 0.54
HDAC8-204ENST00000373560 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
HDAC8-204ENST00000373560 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
HDAC8-204ENST00000373560 WDR90Q96KV7 1748 aa18.4■□□□□ 0.54
HDAC8-204ENST00000373560 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
HDAC8-204ENST00000373560 TRPM1Q7Z4N2 1603 aa18.39■□□□□ 0.53
HDAC8-204ENST00000373560 KIF3CO14782 793 aa18.39■□□□□ 0.53
HDAC8-204ENST00000373560 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
HDAC8-204ENST00000373560 PIK3C2AO00443 1686 aa18.38■□□□□ 0.53
HDAC8-204ENST00000373560 GRIN3BO60391 1043 aa18.38■□□□□ 0.53
HDAC8-204ENST00000373560 WDR17Q8IZU2 1322 aa18.38■□□□□ 0.53
HDAC8-204ENST00000373560 ABCC6O95255 1503 aa18.38■□□□□ 0.53
HDAC8-204ENST00000373560 POLD1P28340 1107 aa18.37■□□□□ 0.53
HDAC8-204ENST00000373560 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-204ENST00000373560 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-204ENST00000373560 USP6P35125 1406 aa18.34■□□□□ 0.53
HDAC8-204ENST00000373560 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
HDAC8-204ENST00000373560 KCNQ4P56696 695 aa18.34■□□□□ 0.53
HDAC8-204ENST00000373560 NLRP13Q86W25 1043 aa18.34■□□□□ 0.53
HDAC8-204ENST00000373560 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
HDAC8-204ENST00000373560 PRELPP51888 382 aa18.33■□□□□ 0.52
HDAC8-204ENST00000373560 PLEKHG3A1L390 1219 aa18.32■□□□□ 0.52
HDAC8-204ENST00000373560 APLP1P51693 650 aa18.32■□□□□ 0.52
HDAC8-204ENST00000373560 HTRA3P83110 453 aa18.32■□□□□ 0.52
HDAC8-204ENST00000373560 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
HDAC8-204ENST00000373560 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
HDAC8-204ENST00000373560 SLC34A2O95436 690 aa18.3■□□□□ 0.52
HDAC8-204ENST00000373560 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
HDAC8-204ENST00000373560 CDCA7Q9BWT1 371 aaPredicted RBP18.3■□□□□ 0.52
HDAC8-204ENST00000373560 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
HDAC8-204ENST00000373560 PPIP5K1Q6PFW1 1433 aa18.3■□□□□ 0.52
HDAC8-204ENST00000373560 LY75O60449 1722 aa18.29■□□□□ 0.52
HDAC8-204ENST00000373560 EXOC5O00471 708 aa18.29■□□□□ 0.52
HDAC8-204ENST00000373560 CARD10Q9BWT7 1032 aa18.29■□□□□ 0.52
HDAC8-204ENST00000373560 KAT6BQ8WYB5 2073 aa18.28■□□□□ 0.52
HDAC8-204ENST00000373560 MSL1Q68DK7 614 aa18.28■□□□□ 0.52
HDAC8-204ENST00000373560 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
HDAC8-204ENST00000373560 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
HDAC8-204ENST00000373560 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms