RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 U2AF1Q01081 240 aaKnown RBP eCLIP8.26□□□□□ -1.09
CSMD2-206ENST00000373388 LUC7L2Q9Y383 392 aaKnown RBP8.26□□□□□ -1.09
CSMD2-206ENST00000373388 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
CSMD2-206ENST00000373388 SPC24Q8NBT2 197 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 NAP1L3Q99457 506 aaPredicted RBP8.25□□□□□ -1.09
CSMD2-206ENST00000373388 NOL3O60936 208 aaKnown RBP8.25□□□□□ -1.09
CSMD2-206ENST00000373388 SERPINC1P01008 464 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 NAA25Q14CX7 972 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 ANKRD45Q5TZF3 282 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 EXOC6Q8TAG9 804 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 PLCD3Q8N3E9 789 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 ANO2Q9NQ90 1003 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 LRRFIP2Q9Y608 721 aaKnown RBP8.25□□□□□ -1.09
CSMD2-206ENST00000373388 EPB41L2O43491 1005 aaKnown RBP8.25□□□□□ -1.09
CSMD2-206ENST00000373388 PLIN1O60240 522 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 SYCP1Q15431 976 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
CSMD2-206ENST00000373388 SMTNL1A8MU46 457 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 CCDC121Q6ZUS5 278 aa8.25□□□□□ -1.09
CSMD2-206ENST00000373388 KANK4Q5T7N3 995 aaPredicted RBP8.24□□□□□ -1.09
CSMD2-206ENST00000373388 STMN4Q9H169 189 aaPredicted RBP8.24□□□□□ -1.09
CSMD2-206ENST00000373388 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 ERC2O15083 957 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 KLHL10Q6JEL2 608 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.24□□□□□ -1.09
CSMD2-206ENST00000373388 FBXO3Q9UK99 471 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 ABCC8Q09428 1581 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 LMNTD2Q8IXW0 634 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 TTC14Q96N46 770 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 NAA15Q9BXJ9 866 aaKnown RBP8.24□□□□□ -1.09
CSMD2-206ENST00000373388 CCDC158Q5M9N0 1113 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 SPATS2LQ9NUQ6 558 aaKnown RBP8.24□□□□□ -1.09
CSMD2-206ENST00000373388 SOGA1O94964 1423 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 TACC1O75410 805 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 XBP1P17861 261 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 CCDC6Q16204 474 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 CEP57Q86XR8 500 aa8.24□□□□□ -1.09
CSMD2-206ENST00000373388 KRT85P78386 507 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 TSNAXIP1Q2TAA8 658 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 MKRN1Q9UHC7 482 aaKnown RBP8.23□□□□□ -1.09
CSMD2-206ENST00000373388 KANK1Q14678 1352 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 PPP1R12BO60237 982 aaPredicted RBP8.23□□□□□ -1.09
CSMD2-206ENST00000373388 ZNF365Q70YC5 407 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 DBN1Q16643 649 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 MLECQ14165 292 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 STIM2Q9P246 746 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 RAB3GAP2Q9H2M9 1393 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 DZIP1LQ8IYY4 767 aaKnown RBP8.23□□□□□ -1.09
CSMD2-206ENST00000373388 TAOK3Q9H2K8 898 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 CASQ1P31415 396 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 PKD2Q13563 968 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 CRBNQ96SW2 442 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 ARHGAP25P42331 645 aa8.23□□□□□ -1.09
CSMD2-206ENST00000373388 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
CSMD2-206ENST00000373388 RB1CC1Q8TDY2 1594 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 TRDNQ13061 729 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 CAPN2P17655 700 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 CTCFLQ8NI51 663 aaPredicted RBP8.22□□□□□ -1.09
CSMD2-206ENST00000373388 BCL11BQ9C0K0 894 aaPredicted RBP8.22□□□□□ -1.09
CSMD2-206ENST00000373388 RRP7AQ9Y3A4 280 aaKnown RBP8.22□□□□□ -1.09
CSMD2-206ENST00000373388 PAK3O75914 559 aaPredicted RBP8.22□□□□□ -1.09
CSMD2-206ENST00000373388 ANKRD1Q15327 319 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 VCXQ9H320 206 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
CSMD2-206ENST00000373388 XPCQ01831 940 aaPredicted RBP8.22□□□□□ -1.09
CSMD2-206ENST00000373388 HSP90AB4PQ58FF6 505 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 CCDC183Q5T5S1 534 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 FBF1Q8TES7 1133 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 TOMM22Q9NS69 142 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 IFFO1Q0D2I5 559 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 IFT74Q96LB3 600 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 RSPH14Q9UHP6 348 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 OPA1O60313 960 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 LUC7L3O95232 432 aaKnown RBP8.22□□□□□ -1.09
CSMD2-206ENST00000373388 MAP7Q14244 749 aa8.22□□□□□ -1.09
CSMD2-206ENST00000373388 MAP3K11Q16584 847 aa8.21□□□□□ -1.09
CSMD2-206ENST00000373388 TCEAL9Q9UHQ7 104 aa8.21□□□□□ -1.09
CSMD2-206ENST00000373388 CLNS1AP54105 237 aaKnown RBP8.21□□□□□ -1.09
CSMD2-206ENST00000373388 UVSSAQ2YD98 709 aa8.21□□□□□ -1.09
CSMD2-206ENST00000373388 PPFIBP2Q8ND30 876 aa8.21□□□□□ -1.09
CSMD2-206ENST00000373388 HIP1O00291 1037 aa8.21□□□□□ -1.09
CSMD2-206ENST00000373388 CEP128Q6ZU80 1094 aa8.21□□□□□ -1.09
CSMD2-206ENST00000373388 ZNF397Q8NF99 534 aaPredicted RBP8.21□□□□□ -1.09
CSMD2-206ENST00000373388 CTAGE5O15320 804 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 TAF4BQ92750 862 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 RILPL2Q969X0 211 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 SLC4A10Q6U841 1118 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 UPF3BQ9BZI7 483 aaKnown RBP8.21□□□□□ -1.1
CSMD2-206ENST00000373388 ALS2CR12Q96Q35 445 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 NUP62CLQ9H1M0 184 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 CNTLNQ9NXG0 1405 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 PRKRIP1Q9H875 184 aaPredicted RBP8.21□□□□□ -1.1
CSMD2-206ENST00000373388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.21□□□□□ -1.1
CSMD2-206ENST00000373388 C16orf45Q96MC5 204 aaPredicted RBP8.21□□□□□ -1.1
CSMD2-206ENST00000373388 TRERF1Q96PN7 1200 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 PLEKHH2Q8IVE3 1493 aa8.21□□□□□ -1.1
CSMD2-206ENST00000373388 KIF1CO43896 1103 aaKnown RBP8.2□□□□□ -1.1
CSMD2-206ENST00000373388 FEZ2Q9UHY8 353 aaPredicted RBP8.2□□□□□ -1.1
CSMD2-206ENST00000373388 CCDC150Q8NCX0 1101 aa8.2□□□□□ -1.1
CSMD2-206ENST00000373388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms