RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 GLI3P10071 1580 aa28.28■■■□□ 2.12
NPDC1-202ENST00000371601 KIF7Q2M1P5 1343 aa28.27■■■□□ 2.12
NPDC1-202ENST00000371601 TCP11L2Q8N4U5 519 aa28.27■■■□□ 2.12
NPDC1-202ENST00000371601 OVOS2A0A0J9YW53 1432 aa28.26■■■□□ 2.11
NPDC1-202ENST00000371601 OVOS2Q6IE36 1432 aa28.26■■■□□ 2.11
NPDC1-202ENST00000371601 UPF1Q92900 1129 aaKnown RBP eCLIP28.26■■■□□ 2.11
NPDC1-202ENST00000371601 CGNL1Q0VF96 1302 aa28.26■■■□□ 2.11
NPDC1-202ENST00000371601 AMPHP49418 695 aa28.25■■■□□ 2.11
NPDC1-202ENST00000371601 KRT27Q7Z3Y8 459 aa28.24■■■□□ 2.11
NPDC1-202ENST00000371601 NRAPQ86VF7 1730 aa28.23■■■□□ 2.11
NPDC1-202ENST00000371601 COL5A2P05997 1499 aaPredicted RBP28.23■■■□□ 2.11
NPDC1-202ENST00000371601 NFAT5O94916 1531 aa28.22■■■□□ 2.11
NPDC1-202ENST00000371601 RRS1Q15050 365 aaKnown RBP28.21■■■□□ 2.11
NPDC1-202ENST00000371601 WDR17Q8IZU2 1322 aa28.21■■■□□ 2.11
NPDC1-202ENST00000371601 THRAP3Q9Y2W1 955 aaKnown RBP28.21■■■□□ 2.11
NPDC1-202ENST00000371601 BARGINQ6ZT62 677 aa28.21■■■□□ 2.11
NPDC1-202ENST00000371601 IP6K1Q92551 441 aa28.21■■■□□ 2.11
NPDC1-202ENST00000371601 LTV1Q96GA3 475 aaPredicted RBP28.21■■■□□ 2.11
NPDC1-202ENST00000371601 MAP3K19Q56UN5 1328 aa28.2■■■□□ 2.1
NPDC1-202ENST00000371601 CRB1P82279 1406 aa28.19■■■□□ 2.1
NPDC1-202ENST00000371601 ANKRD24Q8TF21 1146 aa28.19■■■□□ 2.1
NPDC1-202ENST00000371601 NLRP2Q9NX02 1062 aa28.19■■■□□ 2.1
NPDC1-202ENST00000371601 KNSTRNQ9Y448 316 aa28.19■■■□□ 2.1
NPDC1-202ENST00000371601 LMO7Q8WWI1 1683 aa28.19■■■□□ 2.1
NPDC1-202ENST00000371601 MYOM1P52179 1685 aa28.17■■■□□ 2.1
NPDC1-202ENST00000371601 TNNT2P45379 298 aaPredicted RBP28.16■■■□□ 2.1
NPDC1-202ENST00000371601 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
NPDC1-202ENST00000371601 FAM182BQ5T319 152 aa28.16■■■□□ 2.1
NPDC1-202ENST00000371601 CARD10Q9BWT7 1032 aa28.16■■■□□ 2.1
NPDC1-202ENST00000371601 HOXC9P31274 260 aa28.15■■■□□ 2.1
NPDC1-202ENST00000371601 PPM1GO15355 546 aaPredicted RBP28.15■■■□□ 2.1
NPDC1-202ENST00000371601 WASHC2AQ641Q2 1341 aa28.14■■■□□ 2.1
NPDC1-202ENST00000371601 ERBB3P21860 1342 aa28.13■■■□□ 2.09
NPDC1-202ENST00000371601 COL18A1P39060 1754 aa28.13■■■□□ 2.09
NPDC1-202ENST00000371601 CCDC7Q96M83 1385 aa28.12■■■□□ 2.09
NPDC1-202ENST00000371601 USP54Q70EL1 1684 aa28.11■■■□□ 2.09
NPDC1-202ENST00000371601 EP400Q96L91 3159 aa28.1■■■□□ 2.09
NPDC1-202ENST00000371601 MORC1Q86VD1 984 aa28.09■■■□□ 2.09
NPDC1-202ENST00000371601 HSP90AB2PQ58FF8 381 aa28.08■■■□□ 2.09
NPDC1-202ENST00000371601 EMILIN1Q9Y6C2 1016 aa28.08■■■□□ 2.09
NPDC1-202ENST00000371601 DDB1Q16531 1140 aa28.08■■■□□ 2.09
NPDC1-202ENST00000371601 CDCA7Q9BWT1 371 aaPredicted RBP28.08■■■□□ 2.09
NPDC1-202ENST00000371601 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
NPDC1-202ENST00000371601 CNGB1Q14028 1251 aaPredicted RBP28.07■■■□□ 2.08
NPDC1-202ENST00000371601 CCDC125Q86Z20 511 aa28.07■■■□□ 2.08
NPDC1-202ENST00000371601 SF3B2Q13435 895 aaKnown RBP28.06■■■□□ 2.08
NPDC1-202ENST00000371601 EXOC5O00471 708 aa28.05■■■□□ 2.08
NPDC1-202ENST00000371601 RGPD5Q99666 1765 aa28.05■■■□□ 2.08
NPDC1-202ENST00000371601 ABCC6O95255 1503 aa28.03■■■□□ 2.08
NPDC1-202ENST00000371601 FAM196AQ6ZSG2 479 aa28.03■■■□□ 2.08
NPDC1-202ENST00000371601 POLKQ9UBT6 870 aa28.03■■■□□ 2.08
NPDC1-202ENST00000371601 LTN1O94822 1766 aa28.03■■■□□ 2.08
NPDC1-202ENST00000371601 BRWD3Q6RI45 1802 aa28.03■■■□□ 2.08
NPDC1-202ENST00000371601 PER1O15534 1290 aaPredicted RBP28.02■■■□□ 2.08
NPDC1-202ENST00000371601 ZEB1P37275 1124 aaPredicted RBP28.02■■■□□ 2.08
NPDC1-202ENST00000371601 AMER1Q5JTC6 1135 aaPredicted RBP28.02■■■□□ 2.08
NPDC1-202ENST00000371601 KIF20BQ96Q89 1820 aa28.01■■■□□ 2.08
NPDC1-202ENST00000371601 IL2RBP14784 551 aa28.01■■■□□ 2.07
NPDC1-202ENST00000371601 CC2D1BQ5T0F9 858 aaKnown RBP28.01■■■□□ 2.07
NPDC1-202ENST00000371601 RTL1A6NKG5 1358 aa28.01■■■□□ 2.07
NPDC1-202ENST00000371601 NSD2O96028 1365 aa28■■■□□ 2.07
NPDC1-202ENST00000371601 FLT4P35916 1363 aa28■■■□□ 2.07
NPDC1-202ENST00000371601 THSD7AQ9UPZ6 1657 aa27.98■■■□□ 2.07
NPDC1-202ENST00000371601 NBPF6Q5VWK0 638 aa27.98■■■□□ 2.07
NPDC1-202ENST00000371601 NBPF4Q96M43 638 aa27.98■■■□□ 2.07
NPDC1-202ENST00000371601 INSRP06213 1382 aa27.97■■■□□ 2.07
NPDC1-202ENST00000371601 KIF24Q5T7B8 1368 aa27.97■■■□□ 2.07
NPDC1-202ENST00000371601 TRIM37O94972 964 aa27.96■■■□□ 2.07
NPDC1-202ENST00000371601 USHBP1Q8N6Y0 703 aa27.96■■■□□ 2.07
NPDC1-202ENST00000371601 SMG6Q86US8 1419 aaKnown RBP27.96■■■□□ 2.07
NPDC1-202ENST00000371601 DEFB132Q7Z7B7 95 aa27.94■■■□□ 2.06
NPDC1-202ENST00000371601 MARCH10Q8NA82 808 aaPredicted RBP27.94■■■□□ 2.06
NPDC1-202ENST00000371601 DDX54Q8TDD1 881 aaKnown RBP27.9■■■□□ 2.06
NPDC1-202ENST00000371601 DISP2A7MBM2 1401 aa27.9■■■□□ 2.06
NPDC1-202ENST00000371601 RAPGEF4Q8WZA2 1011 aa27.89■■■□□ 2.06
NPDC1-202ENST00000371601 BAG6P46379 1132 aa27.89■■■□□ 2.05
NPDC1-202ENST00000371601 APBA3O96018 575 aa27.88■■■□□ 2.05
NPDC1-202ENST00000371601 TATP17735 454 aaPredicted RBP27.86■■■□□ 2.05
NPDC1-202ENST00000371601 EIF4A2Q14240 407 aaKnown RBP27.86■■■□□ 2.05
NPDC1-202ENST00000371601 ZCRB1Q8TBF4 217 aaKnown RBP27.86■■■□□ 2.05
NPDC1-202ENST00000371601 EYA1Q99502 592 aa27.86■■■□□ 2.05
NPDC1-202ENST00000371601 MTHFSP49914 203 aa27.85■■■□□ 2.05
NPDC1-202ENST00000371601 EN1Q05925 392 aaPredicted RBP27.85■■■□□ 2.05
NPDC1-202ENST00000371601 PEAK1Q9H792 1746 aa27.84■■■□□ 2.05
NPDC1-202ENST00000371601 OVOS2A0A0G2JMS6 1433 aa27.84■■■□□ 2.05
NPDC1-202ENST00000371601 MAP2P11137 1827 aaKnown RBP27.84■■■□□ 2.05
NPDC1-202ENST00000371601 PARP4Q9UKK3 1724 aaKnown RBP27.83■■■□□ 2.05
NPDC1-202ENST00000371601 ACSBG1Q96GR2 724 aa27.8■■■□□ 2.04
NPDC1-202ENST00000371601 NPC1L1Q9UHC9 1359 aa27.8■■■□□ 2.04
NPDC1-202ENST00000371601 TNS2Q63HR2 1409 aa27.8■■■□□ 2.04
NPDC1-202ENST00000371601 DDX10Q13206 875 aaKnown RBP27.79■■■□□ 2.04
NPDC1-202ENST00000371601 ANKRD26Q9UPS8 1709 aa27.79■■■□□ 2.04
NPDC1-202ENST00000371601 BCL11BQ9C0K0 894 aaPredicted RBP27.78■■■□□ 2.04
NPDC1-202ENST00000371601 LRRC37A3O60309 1634 aa27.78■■■□□ 2.04
NPDC1-202ENST00000371601 PTF1AQ7RTS3 328 aa27.77■■■□□ 2.04
NPDC1-202ENST00000371601 EZH2Q15910 746 aaKnown RBP27.76■■■□□ 2.04
NPDC1-202ENST00000371601 KCNQ2O43526 872 aa27.76■■■□□ 2.03
NPDC1-202ENST00000371601 FAM208AQ9UK61 1670 aaKnown RBP27.75■■■□□ 2.03
NPDC1-202ENST00000371601 MEGF6O75095 1541 aa27.74■■■□□ 2.03
NPDC1-202ENST00000371601 RGPD2P0DJD1 1756 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms