RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 NGEFQ8N5V2 710 aa11.47□□□□□ -0.57
HMGCLL1-204ENST00000370852 KIAA1524Q8TCG1 905 aa11.47□□□□□ -0.57
HMGCLL1-204ENST00000370852 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
HMGCLL1-204ENST00000370852 U2AF1L5P0DN76 240 aaPredicted RBP11.47□□□□□ -0.57
HMGCLL1-204ENST00000370852 U2AF1Q01081 240 aaKnown RBP eCLIP11.47□□□□□ -0.57
HMGCLL1-204ENST00000370852 TAF3Q5VWG9 929 aa11.47□□□□□ -0.57
HMGCLL1-204ENST00000370852 NPC1L1Q9UHC9 1359 aa11.47□□□□□ -0.57
HMGCLL1-204ENST00000370852 PLB1Q6P1J6 1458 aa11.46□□□□□ -0.57
HMGCLL1-204ENST00000370852 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.57
HMGCLL1-204ENST00000370852 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
HMGCLL1-204ENST00000370852 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.46□□□□□ -0.57
HMGCLL1-204ENST00000370852 V9GYY5 206 aaPredicted RBP11.46□□□□□ -0.57
HMGCLL1-204ENST00000370852 RAPGEF6Q8TEU7 1601 aa11.46□□□□□ -0.57
HMGCLL1-204ENST00000370852 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.57
HMGCLL1-204ENST00000370852 TERF2Q15554 542 aa11.46□□□□□ -0.58
HMGCLL1-204ENST00000370852 DISP1Q96F81 1524 aa11.46□□□□□ -0.58
HMGCLL1-204ENST00000370852 CEP152O94986 1710 aa11.45□□□□□ -0.58
HMGCLL1-204ENST00000370852 APBB1O00213 710 aa11.45□□□□□ -0.58
HMGCLL1-204ENST00000370852 USP48Q86UV5 1035 aa11.45□□□□□ -0.58
HMGCLL1-204ENST00000370852 IQGAP1P46940 1657 aa11.45□□□□□ -0.58
HMGCLL1-204ENST00000370852 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
HMGCLL1-204ENST00000370852 DDX41Q9UJV9 622 aaKnown RBP11.45□□□□□ -0.58
HMGCLL1-204ENST00000370852 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
HMGCLL1-204ENST00000370852 FEZ1Q99689 392 aa11.44□□□□□ -0.58
HMGCLL1-204ENST00000370852 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
HMGCLL1-204ENST00000370852 ZBTB7BO15156 539 aaPredicted RBP11.44□□□□□ -0.58
HMGCLL1-204ENST00000370852 LRMPQ12912 555 aa11.44□□□□□ -0.58
HMGCLL1-204ENST00000370852 C16orf45Q96MC5 204 aaPredicted RBP11.44□□□□□ -0.58
HMGCLL1-204ENST00000370852 SLC12A5Q9H2X9 1139 aa11.44□□□□□ -0.58
HMGCLL1-204ENST00000370852 EIF2AK4Q9P2K8 1649 aaKnown RBP11.44□□□□□ -0.58
HMGCLL1-204ENST00000370852 NOS1P29475 1434 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 MBD3O95983 291 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 MLECQ14165 292 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 TMX3Q96JJ7 454 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 SYNJ2O15056 1496 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 TCHHQ07283 1943 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 KDM4AO75164 1064 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 BRD1O95696 1058 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 PTGS1P23219 599 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 GABPB1Q06547 395 aaPredicted RBP11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 RSPH4AQ5TD94 716 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 KIF18AQ8NI77 898 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 TIGD1Q96MW7 591 aa11.43□□□□□ -0.58
HMGCLL1-204ENST00000370852 KANK1Q14678 1352 aa11.42□□□□□ -0.58
HMGCLL1-204ENST00000370852 GIMAP6Q6P9H5 292 aa11.42□□□□□ -0.58
HMGCLL1-204ENST00000370852 DIAPH3Q9NSV4 1193 aa11.42□□□□□ -0.58
HMGCLL1-204ENST00000370852 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
HMGCLL1-204ENST00000370852 ELL2O00472 640 aaPredicted RBP11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 CFAP70Q5T0N1 1121 aa11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 NUP160Q12769 1436 aa11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 ERVK-7P63135 1459 aa11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 SCAF11Q99590 1463 aaKnown RBP11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 NEK4P51957 841 aa11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 NRBP1Q9UHY1 535 aa11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 KIAA0556O60303 1618 aa11.41□□□□□ -0.58
HMGCLL1-204ENST00000370852 TULP2O00295 520 aa11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 ST18O60284 1047 aa11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 CNPY2Q9Y2B0 182 aa11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 MADDQ8WXG6 1647 aa11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 SDSP20132 328 aa11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 TTC22Q5TAA0 569 aa11.4□□□□□ -0.58
HMGCLL1-204ENST00000370852 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 SHANK2Q9UPX8 1470 aa11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 NPHP1O15259 732 aa11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 SRPK2P78362 688 aaKnown RBP11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 TMX1Q9H3N1 280 aa11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 PALD1Q9ULE6 856 aa11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 TMPOP42166 694 aaKnown RBP11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 ZNF592Q92610 1267 aa11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 SECISBP2LQ93073 1101 aaKnown RBP11.39□□□□□ -0.59
HMGCLL1-204ENST00000370852 HNRNPH2P55795 449 aaKnown RBP11.38□□□□□ -0.59
HMGCLL1-204ENST00000370852 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
HMGCLL1-204ENST00000370852 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
HMGCLL1-204ENST00000370852 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
HMGCLL1-204ENST00000370852 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
HMGCLL1-204ENST00000370852 RTF1Q92541 710 aaKnown RBP11.38□□□□□ -0.59
HMGCLL1-204ENST00000370852 TSHZ3Q63HK5 1081 aa11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 FEZ2Q9UHY8 353 aaPredicted RBP11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 ZNF518AQ6AHZ1 1483 aa11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 TNNT1P13805 278 aa11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 PLEKHF1Q96S99 279 aa11.37□□□□□ -0.59
HMGCLL1-204ENST00000370852 CCDC66A2RUB6 948 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 CCDC186Q7Z3E2 898 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 NFATC2IPQ8NCF5 419 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 SYAP1Q96A49 352 aaPredicted RBP11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 ZNF446Q9NWS9 450 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 USP27XA6NNY8 438 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms