RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
UBE3D-203ENST00000369747 AMPHP49418 695 aa22.88■■□□□ 1.25
UBE3D-203ENST00000369747 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
UBE3D-203ENST00000369747 SALL2Q9Y467 1007 aaPredicted RBP22.88■■□□□ 1.25
UBE3D-203ENST00000369747 SHPRHQ149N8 1683 aa22.88■■□□□ 1.25
UBE3D-203ENST00000369747 PDE3BQ13370 1112 aa22.87■■□□□ 1.25
UBE3D-203ENST00000369747 ABCA3Q99758 1704 aa22.87■■□□□ 1.25
UBE3D-203ENST00000369747 FLT4P35916 1363 aa22.87■■□□□ 1.25
UBE3D-203ENST00000369747 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
UBE3D-203ENST00000369747 HOXC9P31274 260 aa22.86■■□□□ 1.25
UBE3D-203ENST00000369747 DIAPH1O60610 1272 aaKnown RBP22.85■■□□□ 1.25
UBE3D-203ENST00000369747 HAP1P54257 671 aaPredicted RBP22.84■■□□□ 1.25
UBE3D-203ENST00000369747 KIAA0232Q92628 1395 aa22.83■■□□□ 1.25
UBE3D-203ENST00000369747 PPP4R2Q9NY27 417 aa22.83■■□□□ 1.25
UBE3D-203ENST00000369747 COL22A1Q8NFW1 1626 aaPredicted RBP22.83■■□□□ 1.25
UBE3D-203ENST00000369747 KIF24Q5T7B8 1368 aa22.83■■□□□ 1.25
UBE3D-203ENST00000369747 HSPA1LP34931 641 aa22.82■■□□□ 1.24
UBE3D-203ENST00000369747 IP6K1Q92551 441 aa22.82■■□□□ 1.24
UBE3D-203ENST00000369747 IL13P35225 146 aa22.82■■□□□ 1.24
UBE3D-203ENST00000369747 EIF4A2Q14240 407 aaKnown RBP22.82■■□□□ 1.24
UBE3D-203ENST00000369747 CHRNA2Q15822 529 aa22.82■■□□□ 1.24
UBE3D-203ENST00000369747 AXIN2Q9Y2T1 843 aa22.82■■□□□ 1.24
UBE3D-203ENST00000369747 U2SURPO15042 1029 aaKnown RBP22.81■■□□□ 1.24
UBE3D-203ENST00000369747 RTL1A6NKG5 1358 aa22.81■■□□□ 1.24
UBE3D-203ENST00000369747 CPDO75976 1380 aa22.8■■□□□ 1.24
UBE3D-203ENST00000369747 CDCA7LQ96GN5 454 aa22.8■■□□□ 1.24
UBE3D-203ENST00000369747 U2AF1L5P0DN76 240 aaPredicted RBP22.79■■□□□ 1.24
UBE3D-203ENST00000369747 U2AF1Q01081 240 aaKnown RBP eCLIP22.79■■□□□ 1.24
UBE3D-203ENST00000369747 TSHZ2Q9NRE2 1034 aa22.79■■□□□ 1.24
UBE3D-203ENST00000369747 LTV1Q96GA3 475 aaPredicted RBP22.78■■□□□ 1.24
UBE3D-203ENST00000369747 RGPD5Q99666 1765 aa22.78■■□□□ 1.24
UBE3D-203ENST00000369747 PRDM11Q9NQV5 511 aa22.78■■□□□ 1.24
UBE3D-203ENST00000369747 COL18A1P39060 1754 aa22.77■■□□□ 1.24
UBE3D-203ENST00000369747 JCADQ9P266 1359 aa22.75■■□□□ 1.23
UBE3D-203ENST00000369747 NUTM2BA6NNL0 878 aaPredicted RBP22.75■■□□□ 1.23
UBE3D-203ENST00000369747 NUTM2EB1AL46 878 aaPredicted RBP22.75■■□□□ 1.23
UBE3D-203ENST00000369747 NUTM2AQ8IVF1 878 aaPredicted RBP22.75■■□□□ 1.23
UBE3D-203ENST00000369747 CCDC146Q8IYE0 955 aa22.74■■□□□ 1.23
UBE3D-203ENST00000369747 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
UBE3D-203ENST00000369747 HMOX1P09601 288 aa22.73■■□□□ 1.23
UBE3D-203ENST00000369747 RCAN3Q9UKA8 241 aa22.73■■□□□ 1.23
UBE3D-203ENST00000369747 ZNF521Q96K83 1311 aa22.73■■□□□ 1.23
UBE3D-203ENST00000369747 ADAMTS2O95450 1211 aa22.72■■□□□ 1.23
UBE3D-203ENST00000369747 ANKRD24Q8TF21 1146 aa22.72■■□□□ 1.23
UBE3D-203ENST00000369747 EYA1Q99502 592 aa22.72■■□□□ 1.23
UBE3D-203ENST00000369747 RGPD1P0DJD0 1748 aa22.72■■□□□ 1.23
UBE3D-203ENST00000369747 ERBB3P21860 1342 aa22.71■■□□□ 1.23
UBE3D-203ENST00000369747 CAMTA1Q9Y6Y1 1673 aa22.71■■□□□ 1.23
UBE3D-203ENST00000369747 AEBP1Q8IUX7 1158 aa22.7■■□□□ 1.23
UBE3D-203ENST00000369747 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.22
UBE3D-203ENST00000369747 RGPD2P0DJD1 1756 aa22.69■■□□□ 1.22
UBE3D-203ENST00000369747 ABCC6O95255 1503 aa22.69■■□□□ 1.22
UBE3D-203ENST00000369747 RRP1P56182 461 aaKnown RBP22.69■■□□□ 1.22
UBE3D-203ENST00000369747 NBPF6Q5VWK0 638 aa22.69■■□□□ 1.22
UBE3D-203ENST00000369747 SULT6B1Q6IMI4 303 aa22.69■■□□□ 1.22
UBE3D-203ENST00000369747 NBPF4Q96M43 638 aa22.69■■□□□ 1.22
UBE3D-203ENST00000369747 RSPH6AQ9H0K4 717 aa22.69■■□□□ 1.22
UBE3D-203ENST00000369747 B4GALNT3Q6L9W6 998 aa22.68■■□□□ 1.22
UBE3D-203ENST00000369747 USHBP1Q8N6Y0 703 aa22.68■■□□□ 1.22
UBE3D-203ENST00000369747 IGSF1Q8N6C5 1336 aa22.68■■□□□ 1.22
UBE3D-203ENST00000369747 FCHSD2O94868 740 aa22.67■■□□□ 1.22
UBE3D-203ENST00000369747 PLEKHF1Q96S99 279 aa22.67■■□□□ 1.22
UBE3D-203ENST00000369747 PRKAR2BP31323 418 aa22.66■■□□□ 1.22
UBE3D-203ENST00000369747 BTG4Q9NY30 223 aa22.65■■□□□ 1.22
UBE3D-203ENST00000369747 COL5A2P05997 1499 aaPredicted RBP22.65■■□□□ 1.22
UBE3D-203ENST00000369747 APAF1O14727 1248 aa22.65■■□□□ 1.22
UBE3D-203ENST00000369747 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
UBE3D-203ENST00000369747 SPATA31A6Q5VVP1 1343 aa22.64■■□□□ 1.22
UBE3D-203ENST00000369747 COL14A1Q05707 1796 aaKnown RBP22.64■■□□□ 1.22
UBE3D-203ENST00000369747 CSB-PGBD3P0DP91 1061 aa22.64■■□□□ 1.21
UBE3D-203ENST00000369747 LRP6O75581 1613 aa22.64■■□□□ 1.21
UBE3D-203ENST00000369747 KDRP35968 1356 aa22.63■■□□□ 1.21
UBE3D-203ENST00000369747 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
UBE3D-203ENST00000369747 DUSP27Q5VZP5 1158 aa22.63■■□□□ 1.21
UBE3D-203ENST00000369747 PHACTR3Q96KR7 559 aa22.63■■□□□ 1.21
UBE3D-203ENST00000369747 STRN4Q9NRL3 753 aa22.63■■□□□ 1.21
UBE3D-203ENST00000369747 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
UBE3D-203ENST00000369747 TCP11L2Q8N4U5 519 aa22.61■■□□□ 1.21
UBE3D-203ENST00000369747 WDR17Q8IZU2 1322 aa22.61■■□□□ 1.21
UBE3D-203ENST00000369747 EVA1CP58658 441 aa22.6■■□□□ 1.21
UBE3D-203ENST00000369747 LARP1Q6PKG0 1096 aaKnown RBP22.6■■□□□ 1.21
UBE3D-203ENST00000369747 FBXO41Q8TF61 875 aa22.6■■□□□ 1.21
UBE3D-203ENST00000369747 PLCH1Q4KWH8 1693 aa22.6■■□□□ 1.21
UBE3D-203ENST00000369747 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
UBE3D-203ENST00000369747 RRP7AQ9Y3A4 280 aaKnown RBP22.59■■□□□ 1.21
UBE3D-203ENST00000369747 MAPK8IP3Q9UPT6 1336 aa22.59■■□□□ 1.21
UBE3D-203ENST00000369747 SLFN5Q08AF3 891 aa22.59■■□□□ 1.21
UBE3D-203ENST00000369747 C8orf37Q96NL8 207 aa22.59■■□□□ 1.21
UBE3D-203ENST00000369747 PNNQ9H307 717 aaKnown RBP22.59■■□□□ 1.21
UBE3D-203ENST00000369747 NEUROD2Q15784 382 aa22.58■■□□□ 1.21
UBE3D-203ENST00000369747 TOM1L2Q6ZVM7 507 aa22.58■■□□□ 1.21
UBE3D-203ENST00000369747 TRMT2AQ8IZ69 625 aaKnown RBP22.58■■□□□ 1.21
UBE3D-203ENST00000369747 NCAPD2Q15021 1401 aa22.58■■□□□ 1.21
UBE3D-203ENST00000369747 FAM208AQ9UK61 1670 aaKnown RBP22.58■■□□□ 1.2
UBE3D-203ENST00000369747 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
UBE3D-203ENST00000369747 SLIT2O94813 1529 aa22.55■■□□□ 1.2
UBE3D-203ENST00000369747 NEFMP07197 916 aa22.54■■□□□ 1.2
UBE3D-203ENST00000369747 SPINK5Q9NQ38 1064 aaPredicted RBP22.54■■□□□ 1.2
UBE3D-203ENST00000369747 USP35Q9P2H5 1018 aa22.54■■□□□ 1.2
UBE3D-203ENST00000369747 TMPOP42166 694 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms