RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
TUBE1-202ENST00000368662 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
TUBE1-202ENST00000368662 PLEKHG5O94827 1062 aa16.35■□□□□ 0.21
TUBE1-202ENST00000368662 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
TUBE1-202ENST00000368662 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
TUBE1-202ENST00000368662 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
TUBE1-202ENST00000368662 ABCC6O95255 1503 aa16.35■□□□□ 0.21
TUBE1-202ENST00000368662 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-202ENST00000368662 FCHSD2O94868 740 aa16.33■□□□□ 0.21
TUBE1-202ENST00000368662 ZC3H6P61129 1189 aaKnown RBP16.33■□□□□ 0.21
TUBE1-202ENST00000368662 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
TUBE1-202ENST00000368662 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
TUBE1-202ENST00000368662 ABCA3Q99758 1704 aa16.31■□□□□ 0.2
TUBE1-202ENST00000368662 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
TUBE1-202ENST00000368662 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
TUBE1-202ENST00000368662 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
TUBE1-202ENST00000368662 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
TUBE1-202ENST00000368662 NEFMP07197 916 aa16.3■□□□□ 0.2
TUBE1-202ENST00000368662 PRDM11Q9NQV5 511 aa16.29■□□□□ 0.2
TUBE1-202ENST00000368662 RGPD1P0DJD0 1748 aa16.28■□□□□ 0.2
TUBE1-202ENST00000368662 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
TUBE1-202ENST00000368662 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
TUBE1-202ENST00000368662 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
TUBE1-202ENST00000368662 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
TUBE1-202ENST00000368662 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
TUBE1-202ENST00000368662 JCADQ9P266 1359 aa16.27■□□□□ 0.19
TUBE1-202ENST00000368662 HMOX1P09601 288 aa16.27■□□□□ 0.19
TUBE1-202ENST00000368662 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.19
TUBE1-202ENST00000368662 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.19
TUBE1-202ENST00000368662 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.19
TUBE1-202ENST00000368662 EYA1Q99502 592 aa16.27■□□□□ 0.19
TUBE1-202ENST00000368662 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.19
TUBE1-202ENST00000368662 ERBB3P21860 1342 aa16.26■□□□□ 0.19
TUBE1-202ENST00000368662 KDRP35968 1356 aa16.26■□□□□ 0.19
TUBE1-202ENST00000368662 COL18A1P39060 1754 aa16.26■□□□□ 0.19
TUBE1-202ENST00000368662 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
TUBE1-202ENST00000368662 APAF1O14727 1248 aa16.25■□□□□ 0.19
TUBE1-202ENST00000368662 PRKAR2BP31323 418 aa16.25■□□□□ 0.19
TUBE1-202ENST00000368662 CHRNA2Q15822 529 aa16.25■□□□□ 0.19
TUBE1-202ENST00000368662 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
TUBE1-202ENST00000368662 LMO7Q8WWI1 1683 aa16.23■□□□□ 0.19
TUBE1-202ENST00000368662 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
TUBE1-202ENST00000368662 NBPF6Q5VWK0 638 aa16.22■□□□□ 0.19
TUBE1-202ENST00000368662 AEBP1Q8IUX7 1158 aa16.22■□□□□ 0.19
TUBE1-202ENST00000368662 NBPF4Q96M43 638 aa16.22■□□□□ 0.19
TUBE1-202ENST00000368662 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
TUBE1-202ENST00000368662 SPATA31A6Q5VVP1 1343 aa16.21■□□□□ 0.19
TUBE1-202ENST00000368662 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
TUBE1-202ENST00000368662 CSB-PGBD3P0DP91 1061 aa16.21■□□□□ 0.19
TUBE1-202ENST00000368662 COL14A1Q05707 1796 aaKnown RBP16.21■□□□□ 0.19
TUBE1-202ENST00000368662 RGPD5Q99666 1765 aa16.21■□□□□ 0.19
TUBE1-202ENST00000368662 PDE3BQ13370 1112 aa16.21■□□□□ 0.18
TUBE1-202ENST00000368662 CCDC27Q2M243 656 aa16.21■□□□□ 0.18
TUBE1-202ENST00000368662 CAMTA1Q9Y6Y1 1673 aa16.2■□□□□ 0.18
TUBE1-202ENST00000368662 HSPA1LP34931 641 aa16.2■□□□□ 0.18
TUBE1-202ENST00000368662 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
TUBE1-202ENST00000368662 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
TUBE1-202ENST00000368662 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
TUBE1-202ENST00000368662 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
TUBE1-202ENST00000368662 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
TUBE1-202ENST00000368662 NFE2L2Q16236 605 aa16.18■□□□□ 0.18
TUBE1-202ENST00000368662 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
TUBE1-202ENST00000368662 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
TUBE1-202ENST00000368662 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
TUBE1-202ENST00000368662 EVA1CP58658 441 aa16.18■□□□□ 0.18
TUBE1-202ENST00000368662 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
TUBE1-202ENST00000368662 ZNF521Q96K83 1311 aa16.17■□□□□ 0.18
TUBE1-202ENST00000368662 NUTM2BA6NNL0 878 aaPredicted RBP16.17■□□□□ 0.18
TUBE1-202ENST00000368662 NUTM2EB1AL46 878 aaPredicted RBP16.17■□□□□ 0.18
TUBE1-202ENST00000368662 NUTM2AQ8IVF1 878 aaPredicted RBP16.17■□□□□ 0.18
TUBE1-202ENST00000368662 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
TUBE1-202ENST00000368662 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
TUBE1-202ENST00000368662 BTG4Q9NY30 223 aa16.17■□□□□ 0.18
TUBE1-202ENST00000368662 ADAMTS2O95450 1211 aa16.16■□□□□ 0.18
TUBE1-202ENST00000368662 RIPK4P57078 832 aa16.16■□□□□ 0.18
TUBE1-202ENST00000368662 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
TUBE1-202ENST00000368662 RRP7AQ9Y3A4 280 aaKnown RBP16.16■□□□□ 0.18
TUBE1-202ENST00000368662 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
TUBE1-202ENST00000368662 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
TUBE1-202ENST00000368662 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
TUBE1-202ENST00000368662 TOM1L2Q6ZVM7 507 aa16.15■□□□□ 0.18
TUBE1-202ENST00000368662 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
TUBE1-202ENST00000368662 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
TUBE1-202ENST00000368662 WDR63Q8IWG1 891 aa16.14■□□□□ 0.17
TUBE1-202ENST00000368662 RAPGEF4Q8WZA2 1011 aa16.14■□□□□ 0.17
TUBE1-202ENST00000368662 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
TUBE1-202ENST00000368662 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
TUBE1-202ENST00000368662 CRB1P82279 1406 aa16.13■□□□□ 0.17
TUBE1-202ENST00000368662 PLCH1Q4KWH8 1693 aa16.12■□□□□ 0.17
TUBE1-202ENST00000368662 PLEKHO1Q53GL0 409 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-202ENST00000368662 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
TUBE1-202ENST00000368662 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-202ENST00000368662 CALD1Q05682 793 aaKnown RBP16.12■□□□□ 0.17
TUBE1-202ENST00000368662 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
TUBE1-202ENST00000368662 LARP1Q6PKG0 1096 aaKnown RBP16.12■□□□□ 0.17
TUBE1-202ENST00000368662 NWD2Q9ULI1 1742 aa16.12■□□□□ 0.17
TUBE1-202ENST00000368662 SLIT2O94813 1529 aa16.11■□□□□ 0.17
TUBE1-202ENST00000368662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.11■□□□□ 0.172e-7■■■■□ 26.5
TUBE1-202ENST00000368662 E9PSI1 815 aa16.1■□□□□ 0.17
TUBE1-202ENST00000368662 HTATSF1O43719 755 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms