RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
LMX1A-203ENST00000367893 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
LMX1A-203ENST00000367893 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
LMX1A-203ENST00000367893 KIF20BQ96Q89 1820 aa17.38■□□□□ 0.37
LMX1A-203ENST00000367893 SF3B2Q13435 895 aaKnown RBP17.38■□□□□ 0.37
LMX1A-203ENST00000367893 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
LMX1A-203ENST00000367893 SLIT3O75094 1523 aa17.38■□□□□ 0.37
LMX1A-203ENST00000367893 ANKRD26Q9UPS8 1709 aa17.37■□□□□ 0.37
LMX1A-203ENST00000367893 NSD2O96028 1365 aa17.36■□□□□ 0.37
LMX1A-203ENST00000367893 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
LMX1A-203ENST00000367893 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
LMX1A-203ENST00000367893 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
LMX1A-203ENST00000367893 COL5A2P05997 1499 aaPredicted RBP17.36■□□□□ 0.37
LMX1A-203ENST00000367893 NLRP6P59044 892 aa17.36■□□□□ 0.37
LMX1A-203ENST00000367893 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
LMX1A-203ENST00000367893 EVA1CP58658 441 aa17.35■□□□□ 0.37
LMX1A-203ENST00000367893 DISP2A7MBM2 1401 aa17.35■□□□□ 0.37
LMX1A-203ENST00000367893 AATKQ6ZMQ8 1374 aa17.35■□□□□ 0.37
LMX1A-203ENST00000367893 FYB1O15117 783 aa17.34■□□□□ 0.37
LMX1A-203ENST00000367893 BAG6P46379 1132 aa17.34■□□□□ 0.37
LMX1A-203ENST00000367893 TCP11L2Q8N4U5 519 aa17.34■□□□□ 0.37
LMX1A-203ENST00000367893 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
LMX1A-203ENST00000367893 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
LMX1A-203ENST00000367893 PRKRIP1Q9H875 184 aaPredicted RBP17.32■□□□□ 0.36
LMX1A-203ENST00000367893 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
LMX1A-203ENST00000367893 EN1Q05925 392 aaPredicted RBP17.31■□□□□ 0.36
LMX1A-203ENST00000367893 FAM196AQ6ZSG2 479 aa17.31■□□□□ 0.36
LMX1A-203ENST00000367893 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
LMX1A-203ENST00000367893 USP31Q70CQ4 1352 aa17.31■□□□□ 0.36
LMX1A-203ENST00000367893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.3■□□□□ 0.36
LMX1A-203ENST00000367893 AXIN2Q9Y2T1 843 aa17.3■□□□□ 0.36
LMX1A-203ENST00000367893 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
LMX1A-203ENST00000367893 CRB1P82279 1406 aa17.3■□□□□ 0.36
LMX1A-203ENST00000367893 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
LMX1A-203ENST00000367893 ANP32CO43423 234 aa17.29■□□□□ 0.36
LMX1A-203ENST00000367893 RALBP1Q15311 655 aa17.29■□□□□ 0.36
LMX1A-203ENST00000367893 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
LMX1A-203ENST00000367893 ARHGEF25Q86VW2 580 aa17.29■□□□□ 0.36
LMX1A-203ENST00000367893 NME9Q86XW9 330 aa17.29■□□□□ 0.36
LMX1A-203ENST00000367893 TRIM37O94972 964 aa17.28■□□□□ 0.36
LMX1A-203ENST00000367893 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
LMX1A-203ENST00000367893 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
LMX1A-203ENST00000367893 NFAT5O94916 1531 aa17.27■□□□□ 0.36
LMX1A-203ENST00000367893 CAMKK2Q96RR4 588 aa17.27■□□□□ 0.36
LMX1A-203ENST00000367893 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
LMX1A-203ENST00000367893 COL18A1P39060 1754 aa17.27■□□□□ 0.35
LMX1A-203ENST00000367893 ZBTB7CA1YPR0 619 aa17.26■□□□□ 0.35
LMX1A-203ENST00000367893 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
LMX1A-203ENST00000367893 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
LMX1A-203ENST00000367893 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
LMX1A-203ENST00000367893 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
LMX1A-203ENST00000367893 PSDA5PKW4 1024 aaPredicted RBP17.24■□□□□ 0.35
LMX1A-203ENST00000367893 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
LMX1A-203ENST00000367893 COG3Q96JB2 828 aa17.23■□□□□ 0.35
LMX1A-203ENST00000367893 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
LMX1A-203ENST00000367893 TOM1L2Q6ZVM7 507 aa17.22■□□□□ 0.35
LMX1A-203ENST00000367893 MIER1Q8N108 512 aa17.22■□□□□ 0.35
LMX1A-203ENST00000367893 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
LMX1A-203ENST00000367893 SOX12O15370 315 aa17.21■□□□□ 0.35
LMX1A-203ENST00000367893 APBA3O96018 575 aa17.21■□□□□ 0.35
LMX1A-203ENST00000367893 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.35
LMX1A-203ENST00000367893 ABCC6O95255 1503 aa17.2■□□□□ 0.34
LMX1A-203ENST00000367893 PEAK1Q9H792 1746 aa17.2■□□□□ 0.34
LMX1A-203ENST00000367893 PPP2R1AP30153 589 aa17.2■□□□□ 0.34
LMX1A-203ENST00000367893 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
LMX1A-203ENST00000367893 R3HDM1Q15032 1099 aaKnown RBP17.2■□□□□ 0.34
LMX1A-203ENST00000367893 CARD10Q9BWT7 1032 aa17.2■□□□□ 0.34
LMX1A-203ENST00000367893 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
LMX1A-203ENST00000367893 LRRC37A3O60309 1634 aa17.19■□□□□ 0.34
LMX1A-203ENST00000367893 LRP5O75197 1615 aa17.19■□□□□ 0.34
LMX1A-203ENST00000367893 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
LMX1A-203ENST00000367893 DDB1Q16531 1140 aa17.18■□□□□ 0.34
LMX1A-203ENST00000367893 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
LMX1A-203ENST00000367893 BCL9O00512 1426 aa17.17■□□□□ 0.34
LMX1A-203ENST00000367893 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
LMX1A-203ENST00000367893 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
LMX1A-203ENST00000367893 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
LMX1A-203ENST00000367893 LTN1O94822 1766 aa17.15■□□□□ 0.34
LMX1A-203ENST00000367893 ERBB3P21860 1342 aa17.15■□□□□ 0.34
LMX1A-203ENST00000367893 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
LMX1A-203ENST00000367893 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
LMX1A-203ENST00000367893 RREB1Q92766 1687 aa17.14■□□□□ 0.33
LMX1A-203ENST00000367893 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
LMX1A-203ENST00000367893 INSRP06213 1382 aa17.13■□□□□ 0.33
LMX1A-203ENST00000367893 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
LMX1A-203ENST00000367893 FBLN1P23142 703 aa17.13■□□□□ 0.33
LMX1A-203ENST00000367893 MTHFSP49914 203 aa17.12■□□□□ 0.33
LMX1A-203ENST00000367893 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
LMX1A-203ENST00000367893 WNK3Q9BYP7 1800 aa17.11■□□□□ 0.33
LMX1A-203ENST00000367893 PLSCR1O15162 318 aa17.11■□□□□ 0.33
LMX1A-203ENST00000367893 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
LMX1A-203ENST00000367893 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
LMX1A-203ENST00000367893 NUP188Q5SRE5 1749 aa17.11■□□□□ 0.33
LMX1A-203ENST00000367893 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
LMX1A-203ENST00000367893 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
LMX1A-203ENST00000367893 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
LMX1A-203ENST00000367893 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
LMX1A-203ENST00000367893 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
LMX1A-203ENST00000367893 EXOC5O00471 708 aa17.09■□□□□ 0.33
LMX1A-203ENST00000367893 PROM2Q8N271 834 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms