RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 CIZ1Q9ULV3 898 aaPredicted RBP14.62□□□□□ -0.07
TPR-201ENST00000367478 TAOK3Q9H2K8 898 aa14.61□□□□□ -0.07
TPR-201ENST00000367478 CEP131Q9UPN4 1083 aa14.61□□□□□ -0.07
TPR-201ENST00000367478 GRIPAP1Q4V328 841 aa14.61□□□□□ -0.07
TPR-201ENST00000367478 PSME1Q06323 249 aa14.61□□□□□ -0.07
TPR-201ENST00000367478 WASF1Q92558 559 aa14.61□□□□□ -0.07
TPR-201ENST00000367478 FYB1O15117 783 aa14.61□□□□□ -0.07
TPR-201ENST00000367478 CCDC83Q8IWF9 413 aa14.61□□□□□ -0.07
TPR-201ENST00000367478 BCL11BQ9C0K0 894 aaPredicted RBP14.61□□□□□ -0.07
TPR-201ENST00000367478 RRBP1Q9P2E9 1410 aaKnown RBP14.61□□□□□ -0.07
TPR-201ENST00000367478 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
TPR-201ENST00000367478 FAM193AP78312 1265 aa14.6□□□□□ -0.07
TPR-201ENST00000367478 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
TPR-201ENST00000367478 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
TPR-201ENST00000367478 GRPEL1Q9HAV7 217 aa14.6□□□□□ -0.07
TPR-201ENST00000367478 KIF18AQ8NI77 898 aa14.59□□□□□ -0.07
TPR-201ENST00000367478 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
TPR-201ENST00000367478 FGFR1OPO95684 399 aaKnown RBP14.59□□□□□ -0.07
TPR-201ENST00000367478 GIGYF2Q6Y7W6 1299 aaKnown RBP14.59□□□□□ -0.07
TPR-201ENST00000367478 CCDC158Q5M9N0 1113 aa14.59□□□□□ -0.07
TPR-201ENST00000367478 SYTL4Q96C24 671 aaPredicted RBP14.59□□□□□ -0.07
TPR-201ENST00000367478 SOGA3Q5TF21 947 aa14.59□□□□□ -0.07
TPR-201ENST00000367478 CCDC69A6NI79 296 aa14.59□□□□□ -0.07
TPR-201ENST00000367478 RBM10P98175 930 aaKnown RBP14.59□□□□□ -0.07
TPR-201ENST00000367478 SPA17Q15506 151 aa14.58□□□□□ -0.07
TPR-201ENST00000367478 MEX3CQ5U5Q3 659 aaKnown RBP14.58□□□□□ -0.07
TPR-201ENST00000367478 UPF3BQ9BZI7 483 aaKnown RBP14.58□□□□□ -0.07
TPR-201ENST00000367478 KIF5CO60282 957 aa14.58□□□□□ -0.08
TPR-201ENST00000367478 KRT32Q14532 448 aa14.58□□□□□ -0.08
TPR-201ENST00000367478 DDX12PQ92771 950 aa14.58□□□□□ -0.08
TPR-201ENST00000367478 CCDC7Q96M83 1385 aa14.58□□□□□ -0.08
TPR-201ENST00000367478 HOOK3Q86VS8 718 aa14.58□□□□□ -0.08
TPR-201ENST00000367478 SCAPERQ9BY12 1400 aa14.58□□□□□ -0.08
TPR-201ENST00000367478 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
TPR-201ENST00000367478 CCDC175P0C221 793 aa14.57□□□□□ -0.08
TPR-201ENST00000367478 C6orf163Q5TEZ5 329 aa14.57□□□□□ -0.08
TPR-201ENST00000367478 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
TPR-201ENST00000367478 EIF5P55010 431 aaKnown RBP14.57□□□□□ -0.08
TPR-201ENST00000367478 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.57□□□□□ -0.083e-6■■■■□ 21.5
TPR-201ENST00000367478 V9GYY5 206 aaPredicted RBP14.57□□□□□ -0.08
TPR-201ENST00000367478 SPECC1LQ69YQ0 1117 aa14.57□□□□□ -0.08
TPR-201ENST00000367478 GNAI2P04899 355 aa14.57□□□□□ -0.08
TPR-201ENST00000367478 FILIP1Q7Z7B0 1213 aa14.57□□□□□ -0.08
TPR-201ENST00000367478 HMGB2P26583 209 aaKnown RBP14.57□□□□□ -0.08
TPR-201ENST00000367478 SMG6Q86US8 1419 aaKnown RBP14.57□□□□□ -0.08
TPR-201ENST00000367478 NAA15Q9BXJ9 866 aaKnown RBP14.56□□□□□ -0.08
TPR-201ENST00000367478 CGNQ9P2M7 1197 aaKnown RBP14.56□□□□□ -0.08
TPR-201ENST00000367478 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
TPR-201ENST00000367478 NECTIN2Q92692 538 aa14.56□□□□□ -0.08
TPR-201ENST00000367478 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
TPR-201ENST00000367478 ZSCAN31Q96LW9 406 aaPredicted RBP14.56□□□□□ -0.08
TPR-201ENST00000367478 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
TPR-201ENST00000367478 NUP62CLQ9H1M0 184 aa14.56□□□□□ -0.08
TPR-201ENST00000367478 FAM177A1Q8N128 213 aaPredicted RBP14.56□□□□□ -0.08
TPR-201ENST00000367478 CTNNA3Q9UI47 895 aa14.56□□□□□ -0.08
TPR-201ENST00000367478 K7ELQ4 463 aaPredicted RBP14.56□□□□□ -0.08
TPR-201ENST00000367478 ESPNB1AK53 854 aa14.56□□□□□ -0.08
TPR-201ENST00000367478 IFFO1Q0D2I5 559 aa14.56□□□□□ -0.08
TPR-201ENST00000367478 PTPN14Q15678 1187 aa14.55□□□□□ -0.08
TPR-201ENST00000367478 LARP1BQ659C4 914 aaKnown RBP14.55□□□□□ -0.08
TPR-201ENST00000367478 SPATA32Q96LK8 384 aa14.55□□□□□ -0.08
TPR-201ENST00000367478 SFPQP23246 707 aaKnown RBP eCLIP14.55□□□□□ -0.08
TPR-201ENST00000367478 DDX23Q9BUQ8 820 aaKnown RBP14.55□□□□□ -0.08
TPR-201ENST00000367478 ZHX3Q9H4I2 956 aa14.55□□□□□ -0.08
TPR-201ENST00000367478 CASQ1P31415 396 aa14.55□□□□□ -0.08
TPR-201ENST00000367478 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
TPR-201ENST00000367478 NUTM2FA1L443 756 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 ERICH4A6NGS2 130 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 PDE3AQ14432 1141 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 GAS2L2Q8NHY3 880 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 CNTLNQ9NXG0 1405 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 TTC39AQ5SRH9 613 aa14.54□□□□□ -0.08
TPR-201ENST00000367478 BBXQ8WY36 941 aaPredicted RBP14.54□□□□□ -0.08
TPR-201ENST00000367478 NEMFO60524 1076 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 MAP3K11Q16584 847 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 ZSCAN30Q86W11 494 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 CCT4P50991 539 aaKnown RBP14.53□□□□□ -0.08
TPR-201ENST00000367478 CUX1P39880 1505 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 FKBP15Q5T1M5 1219 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 GSTTP1A0A1W2PQM5 241 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 PAFAH1B1P43034 410 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 CEBPZQ03701 1054 aaKnown RBP14.53□□□□□ -0.08
TPR-201ENST00000367478 ZNF287Q9HBT7 754 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
TPR-201ENST00000367478 GOLGA6L9A6NEM1 432 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 CCDC150Q8NCX0 1101 aa14.53□□□□□ -0.08
TPR-201ENST00000367478 SREK1Q8WXA9 508 aaKnown RBP14.53□□□□□ -0.08
TPR-201ENST00000367478 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.09
TPR-201ENST00000367478 TNIP1Q15025 636 aa14.52□□□□□ -0.09
TPR-201ENST00000367478 CFAP100Q494V2 611 aa14.52□□□□□ -0.09
TPR-201ENST00000367478 FERMT1Q9BQL6 677 aa14.52□□□□□ -0.09
TPR-201ENST00000367478 FERP16591 822 aa14.52□□□□□ -0.09
TPR-201ENST00000367478 SSR1P43307 286 aaKnown RBP14.51□□□□□ -0.09
TPR-201ENST00000367478 MATR3P43243 847 aaKnown RBP eCLIP14.51□□□□□ -0.09
TPR-201ENST00000367478 SOGA1O94964 1423 aa14.51□□□□□ -0.09
TPR-201ENST00000367478 DHX57Q6P158 1386 aaKnown RBP14.51□□□□□ -0.09
TPR-201ENST00000367478 KANK4Q5T7N3 995 aaPredicted RBP14.51□□□□□ -0.09
TPR-201ENST00000367478 TSG101Q99816 390 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms