RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 NWD2Q9ULI1 1742 aa23.69■■□□□ 1.38
LINC01558-201ENST00000366822 RTL1A6NKG5 1358 aa23.67■■□□□ 1.38
LINC01558-201ENST00000366822 RXRBP28702 533 aa23.67■■□□□ 1.38
LINC01558-201ENST00000366822 MAP2P11137 1827 aaKnown RBP23.66■■□□□ 1.38
LINC01558-201ENST00000366822 AMPHP49418 695 aa23.66■■□□□ 1.38
LINC01558-201ENST00000366822 CDK12Q9NYV4 1490 aaPredicted RBP23.66■■□□□ 1.38
LINC01558-201ENST00000366822 PEAK1Q9H792 1746 aa23.65■■□□□ 1.38
LINC01558-201ENST00000366822 IP6K1Q92551 441 aa23.65■■□□□ 1.38
LINC01558-201ENST00000366822 PRDM11Q9NQV5 511 aa23.65■■□□□ 1.38
LINC01558-201ENST00000366822 INSRP06213 1382 aa23.65■■□□□ 1.38
LINC01558-201ENST00000366822 FLT4P35916 1363 aa23.65■■□□□ 1.38
LINC01558-201ENST00000366822 ABCC6O95255 1503 aa23.64■■□□□ 1.38
LINC01558-201ENST00000366822 ZBTB7CA1YPR0 619 aa23.64■■□□□ 1.37
LINC01558-201ENST00000366822 PPM1GO15355 546 aaPredicted RBP23.64■■□□□ 1.37
LINC01558-201ENST00000366822 HOXC9P31274 260 aa23.64■■□□□ 1.37
LINC01558-201ENST00000366822 LTN1O94822 1766 aa23.64■■□□□ 1.37
LINC01558-201ENST00000366822 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
LINC01558-201ENST00000366822 NRAPQ86VF7 1730 aa23.62■■□□□ 1.37
LINC01558-201ENST00000366822 CCER2I3L3R5 266 aa23.62■■□□□ 1.37
LINC01558-201ENST00000366822 CHRNA2Q15822 529 aa23.62■■□□□ 1.37
LINC01558-201ENST00000366822 COL18A1P39060 1754 aa23.62■■□□□ 1.37
LINC01558-201ENST00000366822 COL14A1Q05707 1796 aaKnown RBP23.61■■□□□ 1.37
LINC01558-201ENST00000366822 HSP90AB2PQ58FF8 381 aa23.61■■□□□ 1.37
LINC01558-201ENST00000366822 QTRT2Q9H974 415 aaKnown RBP23.61■■□□□ 1.37
LINC01558-201ENST00000366822 COL3A1P02461 1466 aaPredicted RBP23.61■■□□□ 1.37
LINC01558-201ENST00000366822 BLMP54132 1417 aaPredicted RBP23.6■■□□□ 1.37
LINC01558-201ENST00000366822 SLIT2O94813 1529 aa23.6■■□□□ 1.37
LINC01558-201ENST00000366822 CFAP53Q96M91 514 aa23.6■■□□□ 1.37
LINC01558-201ENST00000366822 USP21Q9UK80 565 aa23.6■■□□□ 1.37
LINC01558-201ENST00000366822 AXIN2Q9Y2T1 843 aa23.6■■□□□ 1.37
LINC01558-201ENST00000366822 CCDC184Q52MB2 194 aa23.59■■□□□ 1.37
LINC01558-201ENST00000366822 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
LINC01558-201ENST00000366822 LMO7Q8WWI1 1683 aa23.59■■□□□ 1.37
LINC01558-201ENST00000366822 BCL9LQ86UU0 1499 aa23.58■■□□□ 1.37
LINC01558-201ENST00000366822 ATRNO75882 1429 aa23.58■■□□□ 1.36
LINC01558-201ENST00000366822 RBM6P78332 1123 aaKnown RBP23.57■■□□□ 1.36
LINC01558-201ENST00000366822 CAMTA1Q9Y6Y1 1673 aa23.56■■□□□ 1.36
LINC01558-201ENST00000366822 MRS2Q9HD23 443 aa23.55■■□□□ 1.36
LINC01558-201ENST00000366822 TRPC5Q9UL62 973 aaPredicted RBP23.55■■□□□ 1.36
LINC01558-201ENST00000366822 DIAPH1O60610 1272 aaKnown RBP23.54■■□□□ 1.36
LINC01558-201ENST00000366822 IL13P35225 146 aa23.54■■□□□ 1.36
LINC01558-201ENST00000366822 EIF4A2Q14240 407 aaKnown RBP23.54■■□□□ 1.36
LINC01558-201ENST00000366822 RGS12O14924 1447 aa23.53■■□□□ 1.36
LINC01558-201ENST00000366822 ANKRD24Q8TF21 1146 aa23.53■■□□□ 1.36
LINC01558-201ENST00000366822 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
LINC01558-201ENST00000366822 ERBB3P21860 1342 aa23.53■■□□□ 1.36
LINC01558-201ENST00000366822 GLI3P10071 1580 aa23.52■■□□□ 1.36
LINC01558-201ENST00000366822 COL5A2P05997 1499 aaPredicted RBP23.52■■□□□ 1.36
LINC01558-201ENST00000366822 LTV1Q96GA3 475 aaPredicted RBP23.51■■□□□ 1.35
LINC01558-201ENST00000366822 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
LINC01558-201ENST00000366822 NUDCQ9Y266 331 aa23.49■■□□□ 1.35
LINC01558-201ENST00000366822 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
LINC01558-201ENST00000366822 EVA1CP58658 441 aa23.47■■□□□ 1.35
LINC01558-201ENST00000366822 WDR17Q8IZU2 1322 aa23.47■■□□□ 1.35
LINC01558-201ENST00000366822 BRWD3Q6RI45 1802 aa23.47■■□□□ 1.35
LINC01558-201ENST00000366822 CSB-PGBD3P0DP91 1061 aa23.46■■□□□ 1.35
LINC01558-201ENST00000366822 EYA1Q99502 592 aa23.46■■□□□ 1.35
LINC01558-201ENST00000366822 STRN4Q9NRL3 753 aa23.46■■□□□ 1.35
LINC01558-201ENST00000366822 IGSF1Q8N6C5 1336 aa23.45■■□□□ 1.34
LINC01558-201ENST00000366822 UNC5CLQ8IV45 518 aa23.45■■□□□ 1.34
LINC01558-201ENST00000366822 RGPD1P0DJD0 1748 aa23.45■■□□□ 1.34
LINC01558-201ENST00000366822 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
LINC01558-201ENST00000366822 NBPF6Q5VWK0 638 aa23.44■■□□□ 1.34
LINC01558-201ENST00000366822 LARP1Q6PKG0 1096 aaKnown RBP23.44■■□□□ 1.34
LINC01558-201ENST00000366822 NBPF4Q96M43 638 aa23.44■■□□□ 1.34
LINC01558-201ENST00000366822 WDR43Q15061 677 aaKnown RBP eCLIP23.43■■□□□ 1.34
LINC01558-201ENST00000366822 FAM208AQ9UK61 1670 aaKnown RBP23.43■■□□□ 1.34
LINC01558-201ENST00000366822 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
LINC01558-201ENST00000366822 CRB1P82279 1406 aa23.42■■□□□ 1.34
LINC01558-201ENST00000366822 U2AF1L5P0DN76 240 aaPredicted RBP23.41■■□□□ 1.34
LINC01558-201ENST00000366822 U2AF1Q01081 240 aaKnown RBP eCLIP23.41■■□□□ 1.34
LINC01558-201ENST00000366822 TOM1L2Q6ZVM7 507 aa23.41■■□□□ 1.34
LINC01558-201ENST00000366822 UPF1Q92900 1129 aaKnown RBP eCLIP23.41■■□□□ 1.34
LINC01558-201ENST00000366822 CARD10Q9BWT7 1032 aa23.41■■□□□ 1.34
LINC01558-201ENST00000366822 NLRP2Q9NX02 1062 aa23.41■■□□□ 1.34
LINC01558-201ENST00000366822 VPS72Q15906 364 aa23.39■■□□□ 1.33
LINC01558-201ENST00000366822 SULT6B1Q6IMI4 303 aa23.39■■□□□ 1.33
LINC01558-201ENST00000366822 ADAMTS8Q9UP79 889 aa23.39■■□□□ 1.33
LINC01558-201ENST00000366822 KDRP35968 1356 aa23.39■■□□□ 1.33
LINC01558-201ENST00000366822 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
LINC01558-201ENST00000366822 GJD4Q96KN9 370 aaPredicted RBP23.38■■□□□ 1.33
LINC01558-201ENST00000366822 RGPD2P0DJD1 1756 aa23.37■■□□□ 1.33
LINC01558-201ENST00000366822 HMOX1P09601 288 aa23.37■■□□□ 1.33
LINC01558-201ENST00000366822 AEBP1Q8IUX7 1158 aa23.37■■□□□ 1.33
LINC01558-201ENST00000366822 FAM9BQ8IZU0 186 aa23.37■■□□□ 1.33
LINC01558-201ENST00000366822 CCDC9Q9Y3X0 531 aaKnown RBP23.37■■□□□ 1.33
LINC01558-201ENST00000366822 SPATA31A5Q5VU36 1347 aa23.36■■□□□ 1.33
LINC01558-201ENST00000366822 SPATA31A7Q8IWB4 1347 aa23.36■■□□□ 1.33
LINC01558-201ENST00000366822 FCHSD2O94868 740 aa23.36■■□□□ 1.33
LINC01558-201ENST00000366822 RSPH6AQ9H0K4 717 aa23.36■■□□□ 1.33
LINC01558-201ENST00000366822 SPATA31A1Q5TZJ5 1347 aa23.35■■□□□ 1.33
LINC01558-201ENST00000366822 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
LINC01558-201ENST00000366822 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.33
LINC01558-201ENST00000366822 TCP11L2Q8N4U5 519 aa23.32■■□□□ 1.32
LINC01558-201ENST00000366822 PLEKHF1Q96S99 279 aa23.32■■□□□ 1.32
LINC01558-201ENST00000366822 PNNQ9H307 717 aaKnown RBP23.32■■□□□ 1.32
LINC01558-201ENST00000366822 THRAP3Q9Y2W1 955 aaKnown RBP23.32■■□□□ 1.32
LINC01558-201ENST00000366822 PRKAR2BP31323 418 aa23.31■■□□□ 1.32
LINC01558-201ENST00000366822 USP35Q9P2H5 1018 aa23.31■■□□□ 1.32
LINC01558-201ENST00000366822 EP400Q96L91 3159 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms