RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 A0A0G2JS52 829 aa27.55■■■□□ 2
H3F3A-204ENST00000366816 ONECUT3O60422 494 aaPredicted RBP27.55■■■□□ 2
H3F3A-204ENST00000366816 MYT1Q01538 1121 aa27.55■■■□□ 2
H3F3A-204ENST00000366816 SPATA31A1Q5TZJ5 1347 aa27.55■■■□□ 2
H3F3A-204ENST00000366816 COL5A2P05997 1499 aaPredicted RBP27.54■■■□□ 2
H3F3A-204ENST00000366816 COL18A1P39060 1754 aa27.54■■■□□ 2
H3F3A-204ENST00000366816 NSD3Q9BZ95 1437 aa27.54■■■□□ 2
H3F3A-204ENST00000366816 PANK3Q9H999 370 aa27.51■■□□□ 1.99
H3F3A-204ENST00000366816 KIF7Q2M1P5 1343 aa27.5■■□□□ 1.99
H3F3A-204ENST00000366816 UPF1Q92900 1129 aaKnown RBP eCLIP27.5■■□□□ 1.99
H3F3A-204ENST00000366816 RGPD5Q99666 1765 aa27.48■■□□□ 1.99
H3F3A-204ENST00000366816 TOM1L2Q6ZVM7 507 aa27.47■■□□□ 1.99
H3F3A-204ENST00000366816 BRWD3Q6RI45 1802 aa27.46■■□□□ 1.99
H3F3A-204ENST00000366816 CSB-PGBD3P0DP91 1061 aa27.45■■□□□ 1.98
H3F3A-204ENST00000366816 TCP11L2Q8N4U5 519 aa27.45■■□□□ 1.98
H3F3A-204ENST00000366816 LTN1O94822 1766 aa27.45■■□□□ 1.98
H3F3A-204ENST00000366816 WDR17Q8IZU2 1322 aa27.44■■□□□ 1.98
H3F3A-204ENST00000366816 CRB1P82279 1406 aa27.44■■□□□ 1.98
H3F3A-204ENST00000366816 KRT27Q7Z3Y8 459 aa27.44■■□□□ 1.98
H3F3A-204ENST00000366816 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
H3F3A-204ENST00000366816 MAP3K19Q56UN5 1328 aa27.43■■□□□ 1.98
H3F3A-204ENST00000366816 RRS1Q15050 365 aaKnown RBP27.43■■□□□ 1.98
H3F3A-204ENST00000366816 CGNL1Q0VF96 1302 aa27.42■■□□□ 1.98
H3F3A-204ENST00000366816 BARGINQ6ZT62 677 aa27.42■■□□□ 1.98
H3F3A-204ENST00000366816 FAM182BQ5T319 152 aa27.41■■□□□ 1.98
H3F3A-204ENST00000366816 IP6K1Q92551 441 aa27.41■■□□□ 1.98
H3F3A-204ENST00000366816 THSD7AQ9UPZ6 1657 aa27.4■■□□□ 1.98
H3F3A-204ENST00000366816 AMPHP49418 695 aa27.39■■□□□ 1.98
H3F3A-204ENST00000366816 ANKRD24Q8TF21 1146 aa27.39■■□□□ 1.98
H3F3A-204ENST00000366816 THRAP3Q9Y2W1 955 aaKnown RBP27.39■■□□□ 1.98
H3F3A-204ENST00000366816 WASHC2AQ641Q2 1341 aa27.39■■□□□ 1.97
H3F3A-204ENST00000366816 ABCC6O95255 1503 aa27.38■■□□□ 1.97
H3F3A-204ENST00000366816 LTV1Q96GA3 475 aaPredicted RBP27.38■■□□□ 1.97
H3F3A-204ENST00000366816 HOXC9P31274 260 aa27.37■■□□□ 1.97
H3F3A-204ENST00000366816 CARD10Q9BWT7 1032 aa27.37■■□□□ 1.97
H3F3A-204ENST00000366816 ERBB3P21860 1342 aa27.37■■□□□ 1.97
H3F3A-204ENST00000366816 CCDC7Q96M83 1385 aa27.36■■□□□ 1.97
H3F3A-204ENST00000366816 NLRP2Q9NX02 1062 aa27.36■■□□□ 1.97
H3F3A-204ENST00000366816 TNNT2P45379 298 aaPredicted RBP27.34■■□□□ 1.97
H3F3A-204ENST00000366816 EP400Q96L91 3159 aa27.34■■□□□ 1.97
H3F3A-204ENST00000366816 BLMP54132 1417 aaPredicted RBP27.33■■□□□ 1.96
H3F3A-204ENST00000366816 KNSTRNQ9Y448 316 aa27.32■■□□□ 1.96
H3F3A-204ENST00000366816 EMILIN1Q9Y6C2 1016 aa27.32■■□□□ 1.96
H3F3A-204ENST00000366816 PDE3BQ13370 1112 aa27.31■■□□□ 1.96
H3F3A-204ENST00000366816 PPM1GO15355 546 aaPredicted RBP27.29■■□□□ 1.96
H3F3A-204ENST00000366816 HSP90AB2PQ58FF8 381 aa27.29■■□□□ 1.96
H3F3A-204ENST00000366816 PEAK1Q9H792 1746 aa27.27■■□□□ 1.96
H3F3A-204ENST00000366816 RTL1A6NKG5 1358 aa27.26■■□□□ 1.95
H3F3A-204ENST00000366816 PER1O15534 1290 aaPredicted RBP27.26■■□□□ 1.95
H3F3A-204ENST00000366816 DDB1Q16531 1140 aa27.26■■□□□ 1.95
H3F3A-204ENST00000366816 AMER1Q5JTC6 1135 aaPredicted RBP27.25■■□□□ 1.95
H3F3A-204ENST00000366816 POLKQ9UBT6 870 aa27.25■■□□□ 1.95
H3F3A-204ENST00000366816 MORC1Q86VD1 984 aa27.24■■□□□ 1.95
H3F3A-204ENST00000366816 CCDC125Q86Z20 511 aa27.24■■□□□ 1.95
H3F3A-204ENST00000366816 CDCA7Q9BWT1 371 aaPredicted RBP27.24■■□□□ 1.95
H3F3A-204ENST00000366816 PARP4Q9UKK3 1724 aaKnown RBP27.24■■□□□ 1.95
H3F3A-204ENST00000366816 DISP2A7MBM2 1401 aa27.24■■□□□ 1.95
H3F3A-204ENST00000366816 FLT4P35916 1363 aa27.23■■□□□ 1.95
H3F3A-204ENST00000366816 NSD2O96028 1365 aa27.22■■□□□ 1.95
H3F3A-204ENST00000366816 ANKRD26Q9UPS8 1709 aa27.22■■□□□ 1.95
H3F3A-204ENST00000366816 INSRP06213 1382 aa27.22■■□□□ 1.95
H3F3A-204ENST00000366816 CNGB1Q14028 1251 aaPredicted RBP27.21■■□□□ 1.95
H3F3A-204ENST00000366816 NBPF6Q5VWK0 638 aa27.21■■□□□ 1.95
H3F3A-204ENST00000366816 FAM196AQ6ZSG2 479 aa27.21■■□□□ 1.95
H3F3A-204ENST00000366816 NBPF4Q96M43 638 aa27.21■■□□□ 1.95
H3F3A-204ENST00000366816 WNK3Q9BYP7 1800 aa27.2■■□□□ 1.95
H3F3A-204ENST00000366816 LRRC37A3O60309 1634 aa27.2■■□□□ 1.95
H3F3A-204ENST00000366816 EXOC5O00471 708 aa27.2■■□□□ 1.94
H3F3A-204ENST00000366816 IL2RBP14784 551 aa27.2■■□□□ 1.94
H3F3A-204ENST00000366816 USHBP1Q8N6Y0 703 aa27.2■■□□□ 1.94
H3F3A-204ENST00000366816 KIF24Q5T7B8 1368 aa27.2■■□□□ 1.94
H3F3A-204ENST00000366816 MAP2P11137 1827 aaKnown RBP27.19■■□□□ 1.94
H3F3A-204ENST00000366816 CC2D1BQ5T0F9 858 aaKnown RBP27.19■■□□□ 1.94
H3F3A-204ENST00000366816 MARCH10Q8NA82 808 aaPredicted RBP27.19■■□□□ 1.94
H3F3A-204ENST00000366816 RGPD2P0DJD1 1756 aa27.19■■□□□ 1.94
H3F3A-204ENST00000366816 TRIM37O94972 964 aa27.18■■□□□ 1.94
H3F3A-204ENST00000366816 SF3B2Q13435 895 aaKnown RBP27.18■■□□□ 1.94
H3F3A-204ENST00000366816 DEFB132Q7Z7B7 95 aa27.18■■□□□ 1.94
H3F3A-204ENST00000366816 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
H3F3A-204ENST00000366816 FAM208AQ9UK61 1670 aaKnown RBP27.14■■□□□ 1.94
H3F3A-204ENST00000366816 OVOS2A0A0G2JMS6 1433 aa27.11■■□□□ 1.93
H3F3A-204ENST00000366816 TNS2Q63HR2 1409 aa27.11■■□□□ 1.93
H3F3A-204ENST00000366816 ZEB1P37275 1124 aaPredicted RBP27.09■■□□□ 1.93
H3F3A-204ENST00000366816 EIF4A2Q14240 407 aaKnown RBP27.09■■□□□ 1.93
H3F3A-204ENST00000366816 MEGF6O75095 1541 aa27.08■■□□□ 1.93
H3F3A-204ENST00000366816 EN1Q05925 392 aaPredicted RBP27.08■■□□□ 1.93
H3F3A-204ENST00000366816 EYA1Q99502 592 aa27.08■■□□□ 1.93
H3F3A-204ENST00000366816 BAG6P46379 1132 aa27.07■■□□□ 1.92
H3F3A-204ENST00000366816 PTF1AQ7RTS3 328 aa27.07■■□□□ 1.92
H3F3A-204ENST00000366816 DDX54Q8TDD1 881 aaKnown RBP27.07■■□□□ 1.92
H3F3A-204ENST00000366816 APBA3O96018 575 aa27.06■■□□□ 1.92
H3F3A-204ENST00000366816 RAPGEF4Q8WZA2 1011 aa27.06■■□□□ 1.92
H3F3A-204ENST00000366816 RGPD1P0DJD0 1748 aa27.06■■□□□ 1.92
H3F3A-204ENST00000366816 ZCRB1Q8TBF4 217 aaKnown RBP27.04■■□□□ 1.92
H3F3A-204ENST00000366816 NPC1L1Q9UHC9 1359 aa27.04■■□□□ 1.92
H3F3A-204ENST00000366816 TNS1Q9HBL0 1735 aaKnown RBP27.04■■□□□ 1.92
H3F3A-204ENST00000366816 TATP17735 454 aaPredicted RBP27.03■■□□□ 1.92
H3F3A-204ENST00000366816 MTHFSP49914 203 aa27.03■■□□□ 1.92
H3F3A-204ENST00000366816 ACSBG1Q96GR2 724 aa27.02■■□□□ 1.92
H3F3A-204ENST00000366816 EZH2Q15910 746 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms