RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
NID1-202ENST00000366595 MINK1Q8N4C8 1332 aaPredicted RBP19.72■□□□□ 0.75
NID1-202ENST00000366595 KIAA1328Q86T90 577 aa19.71■□□□□ 0.75
NID1-202ENST00000366595 ERICH4A6NGS2 130 aa19.71■□□□□ 0.75
NID1-202ENST00000366595 SMC1AQ14683 1233 aaKnown RBP19.71■□□□□ 0.75
NID1-202ENST00000366595 ZNF397Q8NF99 534 aaPredicted RBP19.71■□□□□ 0.75
NID1-202ENST00000366595 LARP1BQ659C4 914 aaKnown RBP19.7■□□□□ 0.74
NID1-202ENST00000366595 SPATA32Q96LK8 384 aa19.7■□□□□ 0.74
NID1-202ENST00000366595 GNL3LQ9NVN8 582 aaKnown RBP19.7■□□□□ 0.74
NID1-202ENST00000366595 FAM177A1Q8N128 213 aaPredicted RBP19.7■□□□□ 0.74
NID1-202ENST00000366595 SRCIN1Q9C0H9 1055 aa19.7■□□□□ 0.74
NID1-202ENST00000366595 PPM1EQ8WY54 764 aa19.7■□□□□ 0.74
NID1-202ENST00000366595 CEBPZQ03701 1054 aaKnown RBP19.69■□□□□ 0.74
NID1-202ENST00000366595 CCDC158Q5M9N0 1113 aa19.69■□□□□ 0.74
NID1-202ENST00000366595 CGNQ9P2M7 1197 aaKnown RBP19.69■□□□□ 0.74
NID1-202ENST00000366595 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
NID1-202ENST00000366595 SOGA3Q5TF21 947 aa19.69■□□□□ 0.74
NID1-202ENST00000366595 GNAI2P04899 355 aa19.69■□□□□ 0.74
NID1-202ENST00000366595 POTEJP0CG39 1038 aa19.69■□□□□ 0.74
NID1-202ENST00000366595 DNAJC2Q99543 621 aaKnown RBP19.69■□□□□ 0.74
NID1-202ENST00000366595 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
NID1-202ENST00000366595 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 POTEB2H3BUK9 544 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 ZSCAN25Q6NSZ9 544 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 NF2P35240 595 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 SPATA24Q86W54 205 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 WASF1Q92558 559 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 PTPN14Q15678 1187 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 KIF18AQ8NI77 898 aa19.68■□□□□ 0.74
NID1-202ENST00000366595 KRT32Q14532 448 aa19.67■□□□□ 0.74
NID1-202ENST00000366595 NACADO15069 1562 aa19.67■□□□□ 0.74
NID1-202ENST00000366595 MCM4P33991 863 aa19.67■□□□□ 0.74
NID1-202ENST00000366595 EIF5P55010 431 aaKnown RBP19.67■□□□□ 0.74
NID1-202ENST00000366595 GAS2L2Q8NHY3 880 aa19.67■□□□□ 0.74
NID1-202ENST00000366595 CCDC69A6NI79 296 aa19.67■□□□□ 0.74
NID1-202ENST00000366595 GCOM1H8Y6P7 765 aaPredicted RBP19.67■□□□□ 0.74
NID1-202ENST00000366595 MYZAPP0CAP1 466 aa19.67■□□□□ 0.74
NID1-202ENST00000366595 SFPQP23246 707 aaKnown RBP eCLIP19.66■□□□□ 0.74
NID1-202ENST00000366595 MAP3K11Q16584 847 aa19.66■□□□□ 0.74
NID1-202ENST00000366595 CCDC83Q8IWF9 413 aa19.66■□□□□ 0.74
NID1-202ENST00000366595 MTMR7Q9Y216 660 aa19.66■□□□□ 0.74
NID1-202ENST00000366595 SPA17Q15506 151 aa19.65■□□□□ 0.74
NID1-202ENST00000366595 PSME1Q06323 249 aa19.65■□□□□ 0.74
NID1-202ENST00000366595 AIMP1Q12904 312 aaKnown RBP19.65■□□□□ 0.74
NID1-202ENST00000366595 CEP131Q9UPN4 1083 aa19.65■□□□□ 0.74
NID1-202ENST00000366595 KIF5CO60282 957 aa19.65■□□□□ 0.74
NID1-202ENST00000366595 NEBLO76041 1014 aa19.65■□□□□ 0.74
NID1-202ENST00000366595 SYTL4Q96C24 671 aaPredicted RBP19.65■□□□□ 0.74
NID1-202ENST00000366595 CTNNA3Q9UI47 895 aa19.65■□□□□ 0.74
NID1-202ENST00000366595 DNAI2Q9GZS0 605 aa19.65■□□□□ 0.74
NID1-202ENST00000366595 TRIM21P19474 475 aaKnown RBP19.64■□□□□ 0.73
NID1-202ENST00000366595 CCT4P50991 539 aaKnown RBP19.64■□□□□ 0.73
NID1-202ENST00000366595 TTC39AQ5SRH9 613 aa19.64■□□□□ 0.73
NID1-202ENST00000366595 BLOC1S2Q6QNY1 142 aa19.64■□□□□ 0.73
NID1-202ENST00000366595 BACH2Q9BYV9 841 aa19.64■□□□□ 0.73
NID1-202ENST00000366595 ZHX3Q9H4I2 956 aa19.64■□□□□ 0.73
NID1-202ENST00000366595 PPP1R12BO60237 982 aaPredicted RBP19.64■□□□□ 0.73
NID1-202ENST00000366595 NEMFO60524 1076 aa19.64■□□□□ 0.73
NID1-202ENST00000366595 CEP63Q96MT8 703 aa19.64■□□□□ 0.73
NID1-202ENST00000366595 SEPT11Q9NVA2 429 aaKnown RBP19.63■□□□□ 0.73
NID1-202ENST00000366595 FEZ1Q99689 392 aa19.63■□□□□ 0.73
NID1-202ENST00000366595 GIGYF2Q6Y7W6 1299 aaKnown RBP19.63■□□□□ 0.73
NID1-202ENST00000366595 CFAP100Q494V2 611 aa19.62■□□□□ 0.73
NID1-202ENST00000366595 VPS36Q86VN1 386 aa19.62■□□□□ 0.73
NID1-202ENST00000366595 KDM4AO75164 1064 aa19.62■□□□□ 0.73
NID1-202ENST00000366595 POLR3GO15318 223 aaPredicted RBP19.61■□□□□ 0.73
NID1-202ENST00000366595 CCDC175P0C221 793 aa19.61■□□□□ 0.73
NID1-202ENST00000366595 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
NID1-202ENST00000366595 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 CASQ1P31415 396 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 IFFO1Q0D2I5 559 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 PDRG1Q9NUG6 133 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 ANKRD18BA2A2Z9 1011 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 PAFAH1B1P43034 410 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 ANO10Q9NW15 660 aa19.6■□□□□ 0.73
NID1-202ENST00000366595 HMOX1P09601 288 aa19.59■□□□□ 0.73
NID1-202ENST00000366595 SPECC1LQ69YQ0 1117 aa19.59■□□□□ 0.73
NID1-202ENST00000366595 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
NID1-202ENST00000366595 LUZP1Q86V48 1076 aa19.59■□□□□ 0.73
NID1-202ENST00000366595 FKBP15Q5T1M5 1219 aa19.58■□□□□ 0.73
NID1-202ENST00000366595 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.72
NID1-202ENST00000366595 NAA15Q9BXJ9 866 aaKnown RBP19.58■□□□□ 0.72
NID1-202ENST00000366595 MCM5P33992 734 aa19.58■□□□□ 0.72
NID1-202ENST00000366595 TWISTNBQ3B726 338 aaPredicted RBP19.58■□□□□ 0.72
NID1-202ENST00000366595 TICAM2Q86XR7 235 aa19.58■□□□□ 0.72
NID1-202ENST00000366595 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.72
NID1-202ENST00000366595 KIF4BQ2VIQ3 1234 aa19.57■□□□□ 0.72
NID1-202ENST00000366595 STK3Q13188 491 aa19.57■□□□□ 0.72
NID1-202ENST00000366595 SMARCC1Q92922 1105 aaPredicted RBP19.57■□□□□ 0.72
NID1-202ENST00000366595 USO1O60763 962 aaKnown RBP19.57■□□□□ 0.72
NID1-202ENST00000366595 C6orf163Q5TEZ5 329 aa19.57■□□□□ 0.72
NID1-202ENST00000366595 PNISRQ8TF01 805 aaKnown RBP19.57■□□□□ 0.72
NID1-202ENST00000366595 FHOD3Q2V2M9 1422 aa19.56■□□□□ 0.72
NID1-202ENST00000366595 GOLGA6L9A6NEM1 432 aa19.56■□□□□ 0.72
NID1-202ENST00000366595 FGFR1OPO95684 399 aaKnown RBP19.56■□□□□ 0.72
NID1-202ENST00000366595 RNF187Q5TA31 235 aaPredicted RBP19.56■□□□□ 0.72
NID1-202ENST00000366595 CCDC113Q9H0I3 377 aa19.56■□□□□ 0.72
NID1-202ENST00000366595 ANAPC15P60006 121 aa19.56■□□□□ 0.72
NID1-202ENST00000366595 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms