RNA–Protein interactions for RNA: ENST00000364888.1

RN7SKP55-201, Transcript of RNA, 7SK small nuclear pseudogene 55, humanhuman

BASIC

Gene RN7SKP55, Length 307 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP55-201ENST00000364888 USP35Q9P2H5 1018 aa9.69□□□□□ -0.86
RN7SKP55-201ENST00000364888 KIF20BQ96Q89 1820 aa9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 CAMTA1Q9Y6Y1 1673 aa9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 SPATA31A5Q5VU36 1347 aa9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 SPATA31A7Q8IWB4 1347 aa9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 AXIN2Q9Y2T1 843 aa9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 NRAPQ86VF7 1730 aa9.68□□□□□ -0.86
RN7SKP55-201ENST00000364888 ABCC6O95255 1503 aa9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 COL5A2P05997 1499 aaPredicted RBP9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 MAP3K19Q56UN5 1328 aa9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 SPATA31A1Q5TZJ5 1347 aa9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 WDR17Q8IZU2 1322 aa9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 FAM98CQ17RN3 349 aaKnown RBP9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 MORC1Q86VD1 984 aa9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 IP6K1Q92551 441 aa9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 THRAP3Q9Y2W1 955 aaKnown RBP9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 LMO7Q8WWI1 1683 aa9.67□□□□□ -0.86
RN7SKP55-201ENST00000364888 BLMP54132 1417 aaPredicted RBP9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 CRB1P82279 1406 aa9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 PPM1GO15355 546 aaPredicted RBP9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 ONECUT3O60422 494 aaPredicted RBP9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 HOXC9P31274 260 aa9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 TNNT2P45379 298 aaPredicted RBP9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 SEPT12Q8IYM1 358 aa9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 TCP11L2Q8N4U5 519 aa9.66□□□□□ -0.86
RN7SKP55-201ENST00000364888 RGS12O14924 1447 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 KIF24Q5T7B8 1368 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 ERBB3P21860 1342 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 FBLN1P23142 703 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 BARGINQ6ZT62 677 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 ANKRD24Q8TF21 1146 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 LTV1Q96GA3 475 aaPredicted RBP9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 NLRP2Q9NX02 1062 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 GLI3P10071 1580 aa9.65□□□□□ -0.86
RN7SKP55-201ENST00000364888 LTN1O94822 1766 aa9.65□□□□□ -0.87
RN7SKP55-201ENST00000364888 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.87
RN7SKP55-201ENST00000364888 FLT4P35916 1363 aa9.64□□□□□ -0.87
RN7SKP55-201ENST00000364888 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
RN7SKP55-201ENST00000364888 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
RN7SKP55-201ENST00000364888 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
RN7SKP55-201ENST00000364888 CARD10Q9BWT7 1032 aa9.64□□□□□ -0.87
RN7SKP55-201ENST00000364888 COL18A1P39060 1754 aa9.64□□□□□ -0.87
RN7SKP55-201ENST00000364888 CC2D1BQ5T0F9 858 aaKnown RBP9.63□□□□□ -0.87
RN7SKP55-201ENST00000364888 KRT27Q7Z3Y8 459 aa9.63□□□□□ -0.87
RN7SKP55-201ENST00000364888 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
RN7SKP55-201ENST00000364888 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
RN7SKP55-201ENST00000364888 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
RN7SKP55-201ENST00000364888 CNGB1Q14028 1251 aaPredicted RBP9.62□□□□□ -0.87
RN7SKP55-201ENST00000364888 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
RN7SKP55-201ENST00000364888 POLKQ9UBT6 870 aa9.62□□□□□ -0.87
RN7SKP55-201ENST00000364888 INSRP06213 1382 aa9.62□□□□□ -0.87
RN7SKP55-201ENST00000364888 NPC1L1Q9UHC9 1359 aa9.62□□□□□ -0.87
RN7SKP55-201ENST00000364888 RGPD5Q99666 1765 aa9.61□□□□□ -0.87
RN7SKP55-201ENST00000364888 IL2RBP14784 551 aa9.6□□□□□ -0.87
RN7SKP55-201ENST00000364888 DDB1Q16531 1140 aa9.6□□□□□ -0.87
RN7SKP55-201ENST00000364888 EXOC5O00471 708 aa9.59□□□□□ -0.87
RN7SKP55-201ENST00000364888 DDX10Q13206 875 aaKnown RBP9.59□□□□□ -0.87
RN7SKP55-201ENST00000364888 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 THSD7AQ9UPZ6 1657 aa9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 NBPF6Q5VWK0 638 aa9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 FAM196AQ6ZSG2 479 aa9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 RAPGEF4Q8WZA2 1011 aa9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 NBPF4Q96M43 638 aa9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 MAP2P11137 1827 aaKnown RBP9.58□□□□□ -0.88
RN7SKP55-201ENST00000364888 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
RN7SKP55-201ENST00000364888 MTHFSP49914 203 aa9.57□□□□□ -0.88
RN7SKP55-201ENST00000364888 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.88
RN7SKP55-201ENST00000364888 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 TATP17735 454 aaPredicted RBP9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 EIF4A2Q14240 407 aaKnown RBP9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 USHBP1Q8N6Y0 703 aa9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 CFAP53Q96M91 514 aa9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 PARP4Q9UKK3 1724 aaKnown RBP9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 DISP2A7MBM2 1401 aa9.56□□□□□ -0.88
RN7SKP55-201ENST00000364888 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
RN7SKP55-201ENST00000364888 OVOS2A0A0G2JMS6 1433 aa9.55□□□□□ -0.88
RN7SKP55-201ENST00000364888 DIAPH1O60610 1272 aaKnown RBP9.54□□□□□ -0.88
RN7SKP55-201ENST00000364888 ZCRB1Q8TBF4 217 aaKnown RBP9.54□□□□□ -0.88
RN7SKP55-201ENST00000364888 DDX54Q8TDD1 881 aaKnown RBP9.54□□□□□ -0.88
RN7SKP55-201ENST00000364888 EYA1Q99502 592 aa9.54□□□□□ -0.88
RN7SKP55-201ENST00000364888 TNS2Q63HR2 1409 aa9.54□□□□□ -0.88
RN7SKP55-201ENST00000364888 LRRC37A3O60309 1634 aa9.53□□□□□ -0.88
RN7SKP55-201ENST00000364888 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
RN7SKP55-201ENST00000364888 RALBP1Q15311 655 aa9.53□□□□□ -0.88
RN7SKP55-201ENST00000364888 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
RN7SKP55-201ENST00000364888 WNK3Q9BYP7 1800 aa9.53□□□□□ -0.88
RN7SKP55-201ENST00000364888 EP400Q96L91 3159 aa9.53□□□□□ -0.88
RN7SKP55-201ENST00000364888 IL13P35225 146 aa9.52□□□□□ -0.89
RN7SKP55-201ENST00000364888 SPG7Q9UQ90 795 aa9.52□□□□□ -0.89
RN7SKP55-201ENST00000364888 NUDCQ9Y266 331 aa9.52□□□□□ -0.89
RN7SKP55-201ENST00000364888 IGSF1Q8N6C5 1336 aa9.52□□□□□ -0.89
RN7SKP55-201ENST00000364888 MEGF6O75095 1541 aa9.51□□□□□ -0.89
RN7SKP55-201ENST00000364888 RGPD2P0DJD1 1756 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms