RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 LILRB3O75022 631 aa6.65□□□□□ -1.34
RNU6-238P-201ENST00000363313 DHX9Q08211 1270 aaKnown RBP6.65□□□□□ -1.34
RNU6-238P-201ENST00000363313 PARP9Q8IXQ6 854 aa6.65□□□□□ -1.34
RNU6-238P-201ENST00000363313 CCDC155Q8N6L0 562 aa6.65□□□□□ -1.34
RNU6-238P-201ENST00000363313 HELBQ8NG08 1087 aaPredicted RBP6.65□□□□□ -1.34
RNU6-238P-201ENST00000363313 ARHGEF15O94989 841 aa6.64□□□□□ -1.35
RNU6-238P-201ENST00000363313 ZNF385CQ66K41 422 aaPredicted RBP6.64□□□□□ -1.35
RNU6-238P-201ENST00000363313 PDXDC2PQ6P474 469 aa6.64□□□□□ -1.35
RNU6-238P-201ENST00000363313 SCARF2Q96GP6 870 aaPredicted RBP6.64□□□□□ -1.35
RNU6-238P-201ENST00000363313 NUTM2BA6NNL0 878 aaPredicted RBP6.63□□□□□ -1.35
RNU6-238P-201ENST00000363313 NUTM2EB1AL46 878 aaPredicted RBP6.63□□□□□ -1.35
RNU6-238P-201ENST00000363313 NUTM2DQ5VT03 806 aaPredicted RBP6.63□□□□□ -1.35
RNU6-238P-201ENST00000363313 SV2AQ7L0J3 742 aa6.63□□□□□ -1.35
RNU6-238P-201ENST00000363313 NUTM2AQ8IVF1 878 aaPredicted RBP6.63□□□□□ -1.35
RNU6-238P-201ENST00000363313 CABLES1Q8TDN4 633 aa6.63□□□□□ -1.35
RNU6-238P-201ENST00000363313 ZC3H15Q8WU90 426 aaKnown RBP6.63□□□□□ -1.35
RNU6-238P-201ENST00000363313 ZC3H4Q9UPT8 1303 aaKnown RBP6.62□□□□□ -1.35
RNU6-238P-201ENST00000363313 TRIM66O15016 1216 aa6.62□□□□□ -1.35
RNU6-238P-201ENST00000363313 ITGA6P23229 1130 aa6.62□□□□□ -1.35
RNU6-238P-201ENST00000363313 PPP1R26Q5T8A7 1209 aaPredicted RBP6.62□□□□□ -1.35
RNU6-238P-201ENST00000363313 SVOPQ8N4V2 548 aa6.62□□□□□ -1.35
RNU6-238P-201ENST00000363313 TRIM52Q96A61 297 aa6.62□□□□□ -1.35
RNU6-238P-201ENST00000363313 AK7Q96M32 723 aa6.62□□□□□ -1.35
RNU6-238P-201ENST00000363313 MARSP56192 900 aaKnown RBP6.61□□□□□ -1.35
RNU6-238P-201ENST00000363313 ERFEQ4G0M1 354 aa6.61□□□□□ -1.35
RNU6-238P-201ENST00000363313 MYSM1Q5VVJ2 828 aa6.61□□□□□ -1.35
RNU6-238P-201ENST00000363313 RSPH6AQ9H0K4 717 aa6.6□□□□□ -1.35
RNU6-238P-201ENST00000363313 MAGEB6P1A0A0J9YX57 407 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 FIGNL2A6NMB9 653 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 SRSF11Q05519 484 aaKnown RBP6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 RNFT1Q5M7Z0 435 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 VWA5B2Q8N398 1253 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 TSC1Q92574 1164 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 GMCL1Q96IK5 515 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 LIMD1Q9UGP4 676 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 GPSM3Q9Y4H4 160 aa6.59□□□□□ -1.35
RNU6-238P-201ENST00000363313 QPCTQ16769 361 aa6.58□□□□□ -1.36
RNU6-238P-201ENST00000363313 CSPP1Q1MSJ5 1256 aa6.58□□□□□ -1.36
RNU6-238P-201ENST00000363313 KCTD15Q96SI1 283 aaPredicted RBP6.58□□□□□ -1.36
RNU6-238P-201ENST00000363313 ARHGAP9Q9BRR9 750 aa6.58□□□□□ -1.36
RNU6-238P-201ENST00000363313 IRS1P35568 1242 aa6.57□□□□□ -1.36
RNU6-238P-201ENST00000363313 SLC10A4Q96EP9 437 aa6.57□□□□□ -1.36
RNU6-238P-201ENST00000363313 FKBPLQ9UIM3 349 aa6.57□□□□□ -1.36
RNU6-238P-201ENST00000363313 CBLBQ13191 982 aa6.56□□□□□ -1.36
RNU6-238P-201ENST00000363313 MAP3K10Q02779 954 aa6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 RTL5Q5HYW3 569 aaPredicted RBP6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 GPAT2Q6NUI2 795 aa6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 ZBTB33Q86T24 672 aa6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 RNF217Q8TC41 542 aa6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 WHAMMQ8TF30 809 aa6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 CARD14Q9BXL6 1004 aa6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 LRRC4BQ9NT99 713 aa6.55□□□□□ -1.36
RNU6-238P-201ENST00000363313 CDC14CA4D256 554 aa6.54□□□□□ -1.36
RNU6-238P-201ENST00000363313 PHF20L1A8MW92 1017 aa6.54□□□□□ -1.36
RNU6-238P-201ENST00000363313 ADAMTS2O95450 1211 aa6.54□□□□□ -1.36
RNU6-238P-201ENST00000363313 CTSOP43234 321 aaPredicted RBP6.54□□□□□ -1.36
RNU6-238P-201ENST00000363313 CLK2P49760 499 aaKnown RBP6.54□□□□□ -1.36
RNU6-238P-201ENST00000363313 PTK2Q05397 1052 aa6.54□□□□□ -1.36
RNU6-238P-201ENST00000363313 NBPF20Q3BBV1 942 aa6.54□□□□□ -1.36
RNU6-238P-201ENST00000363313 SENP3-EIF4A1A0A087X0R7 540 aa6.53□□□□□ -1.36
RNU6-238P-201ENST00000363313 INTS6LQ5JSJ4 861 aaKnown RBP6.53□□□□□ -1.36
RNU6-238P-201ENST00000363313 CCDC125Q86Z20 511 aa6.53□□□□□ -1.36
RNU6-238P-201ENST00000363313 PNMA1Q8ND90 353 aa6.53□□□□□ -1.36
RNU6-238P-201ENST00000363313 INSM2Q96T92 566 aaPredicted RBP6.53□□□□□ -1.36
RNU6-238P-201ENST00000363313 PDE4DQ08499 809 aa6.52□□□□□ -1.37
RNU6-238P-201ENST00000363313 PPP2R2DQ66LE6 453 aa6.52□□□□□ -1.37
RNU6-238P-201ENST00000363313 LYPD4Q6UWN0 246 aa6.52□□□□□ -1.37
RNU6-238P-201ENST00000363313 BEND7Q8N7W2 519 aaPredicted RBP6.52□□□□□ -1.37
RNU6-238P-201ENST00000363313 POLMQ9NP87 494 aaPredicted RBP6.52□□□□□ -1.37
RNU6-238P-201ENST00000363313 ADH1AP07327 375 aa6.51□□□□□ -1.37
RNU6-238P-201ENST00000363313 CELA2BP08218 269 aaPredicted RBP6.51□□□□□ -1.37
RNU6-238P-201ENST00000363313 PTGIRP43119 386 aa6.51□□□□□ -1.37
RNU6-238P-201ENST00000363313 RELBQ01201 579 aa6.51□□□□□ -1.37
RNU6-238P-201ENST00000363313 CTDSPL2Q05D32 466 aa6.51□□□□□ -1.37
RNU6-238P-201ENST00000363313 FOXR1Q6PIV2 292 aa6.51□□□□□ -1.37
RNU6-238P-201ENST00000363313 MSTNO14793 375 aa6.5□□□□□ -1.37
RNU6-238P-201ENST00000363313 RNF144AP50876 292 aaPredicted RBP6.5□□□□□ -1.37
RNU6-238P-201ENST00000363313 LYSMD3Q7Z3D4 306 aa6.5□□□□□ -1.37
RNU6-238P-201ENST00000363313 SEPT12Q8IYM1 358 aa6.5□□□□□ -1.37
RNU6-238P-201ENST00000363313 AGBL1Q96MI9 1066 aa6.5□□□□□ -1.37
RNU6-238P-201ENST00000363313 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
RNU6-238P-201ENST00000363313 GPC1P35052 558 aa6.49□□□□□ -1.37
RNU6-238P-201ENST00000363313 TRIM22Q8IYM9 498 aa6.49□□□□□ -1.37
RNU6-238P-201ENST00000363313 ESPNB1AK53 854 aa6.48□□□□□ -1.37
RNU6-238P-201ENST00000363313 LILRA1O75019 489 aa6.48□□□□□ -1.37
RNU6-238P-201ENST00000363313 GAS6Q14393 721 aa6.48□□□□□ -1.37
RNU6-238P-201ENST00000363313 H7C1W4 665 aa6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 ADAM23O75077 832 aa6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 BCRP11274 1271 aa6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 FOXD4L5Q5VV16 416 aaPredicted RBP6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 PODNQ7Z5L7 613 aa6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 ALYREFQ86V81 257 aaKnown RBP6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 ZNF784Q8NCA9 323 aaPredicted RBP6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 ADAM32Q8TC27 787 aa6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 DCAF5Q96JK2 942 aa6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 OCSTAMPQ9BR26 566 aa6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 ZNF395Q9H8N7 513 aaPredicted RBP6.47□□□□□ -1.37
RNU6-238P-201ENST00000363313 SKIV2LQ15477 1246 aaKnown RBP6.46□□□□□ -1.38
RNU6-238P-201ENST00000363313 WDR44Q5JSH3 913 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms