RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 DIAPH1O60610 1272 aaKnown RBP22.74■■□□□ 1.23
LMNA-202ENST00000361308 CHRNA2Q15822 529 aa22.74■■□□□ 1.23
LMNA-202ENST00000361308 ADAMTS2O95450 1211 aa22.74■■□□□ 1.23
LMNA-202ENST00000361308 LTN1O94822 1766 aa22.72■■□□□ 1.23
LMNA-202ENST00000361308 ABCA3Q99758 1704 aa22.72■■□□□ 1.23
LMNA-202ENST00000361308 FAM83GA6ND36 823 aa22.72■■□□□ 1.23
LMNA-202ENST00000361308 NUDCQ9Y266 331 aa22.72■■□□□ 1.23
LMNA-202ENST00000361308 AXIN2Q9Y2T1 843 aa22.72■■□□□ 1.23
LMNA-202ENST00000361308 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
LMNA-202ENST00000361308 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
LMNA-202ENST00000361308 IL13P35225 146 aa22.69■■□□□ 1.22
LMNA-202ENST00000361308 EIF4A2Q14240 407 aaKnown RBP22.69■■□□□ 1.22
LMNA-202ENST00000361308 WDR43Q15061 677 aaKnown RBP eCLIP22.69■■□□□ 1.22
LMNA-202ENST00000361308 FAM9BQ8IZU0 186 aa22.69■■□□□ 1.22
LMNA-202ENST00000361308 LTV1Q96GA3 475 aaPredicted RBP22.69■■□□□ 1.22
LMNA-202ENST00000361308 BLMP54132 1417 aaPredicted RBP22.68■■□□□ 1.22
LMNA-202ENST00000361308 U2SURPO15042 1029 aaKnown RBP22.68■■□□□ 1.22
LMNA-202ENST00000361308 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
LMNA-202ENST00000361308 ANKRD24Q8TF21 1146 aa22.65■■□□□ 1.22
LMNA-202ENST00000361308 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
LMNA-202ENST00000361308 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.22
LMNA-202ENST00000361308 BTG4Q9NY30 223 aa22.65■■□□□ 1.22
LMNA-202ENST00000361308 ABCC6O95255 1503 aa22.64■■□□□ 1.22
LMNA-202ENST00000361308 EVA1CP58658 441 aa22.64■■□□□ 1.21
LMNA-202ENST00000361308 ADAMTS8Q9UP79 889 aa22.64■■□□□ 1.21
LMNA-202ENST00000361308 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
LMNA-202ENST00000361308 MEX3CQ5U5Q3 659 aaKnown RBP22.63■■□□□ 1.21
LMNA-202ENST00000361308 ERBB3P21860 1342 aa22.63■■□□□ 1.21
LMNA-202ENST00000361308 COL18A1P39060 1754 aa22.63■■□□□ 1.21
LMNA-202ENST00000361308 C8orf37Q96NL8 207 aa22.62■■□□□ 1.21
LMNA-202ENST00000361308 NGLY1Q96IV0 654 aa22.62■■□□□ 1.21
LMNA-202ENST00000361308 CAMTA1Q9Y6Y1 1673 aa22.61■■□□□ 1.21
LMNA-202ENST00000361308 EYA1Q99502 592 aa22.61■■□□□ 1.21
LMNA-202ENST00000361308 STRN4Q9NRL3 753 aa22.6■■□□□ 1.21
LMNA-202ENST00000361308 COL14A1Q05707 1796 aaKnown RBP22.6■■□□□ 1.21
LMNA-202ENST00000361308 LRP6O75581 1613 aa22.6■■□□□ 1.21
LMNA-202ENST00000361308 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
LMNA-202ENST00000361308 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
LMNA-202ENST00000361308 RGPD5Q99666 1765 aa22.59■■□□□ 1.21
LMNA-202ENST00000361308 LMO7Q8WWI1 1683 aa22.58■■□□□ 1.21
LMNA-202ENST00000361308 HMOX1P09601 288 aa22.58■■□□□ 1.21
LMNA-202ENST00000361308 NLRP2Q9NX02 1062 aa22.58■■□□□ 1.21
LMNA-202ENST00000361308 WDR17Q8IZU2 1322 aa22.57■■□□□ 1.2
LMNA-202ENST00000361308 SULT6B1Q6IMI4 303 aa22.57■■□□□ 1.2
LMNA-202ENST00000361308 COL5A2P05997 1499 aaPredicted RBP22.57■■□□□ 1.2
LMNA-202ENST00000361308 IGSF1Q8N6C5 1336 aa22.57■■□□□ 1.2
LMNA-202ENST00000361308 FCHSD2O94868 740 aa22.57■■□□□ 1.2
LMNA-202ENST00000361308 TOM1L2Q6ZVM7 507 aa22.57■■□□□ 1.2
LMNA-202ENST00000361308 PNNQ9H307 717 aaKnown RBP22.57■■□□□ 1.2
LMNA-202ENST00000361308 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
LMNA-202ENST00000361308 FNBP4Q8N3X1 1017 aaPredicted RBP22.55■■□□□ 1.2
LMNA-202ENST00000361308 SLIT2O94813 1529 aa22.54■■□□□ 1.2
LMNA-202ENST00000361308 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
LMNA-202ENST00000361308 USHBP1Q8N6Y0 703 aa22.54■■□□□ 1.2
LMNA-202ENST00000361308 UNC5CLQ8IV45 518 aa22.53■■□□□ 1.2
LMNA-202ENST00000361308 CCDC146Q8IYE0 955 aa22.52■■□□□ 1.2
LMNA-202ENST00000361308 RSPH6AQ9H0K4 717 aa22.52■■□□□ 1.2
LMNA-202ENST00000361308 NEFMP07197 916 aa22.51■■□□□ 1.19
LMNA-202ENST00000361308 PRKAR2BP31323 418 aa22.51■■□□□ 1.19
LMNA-202ENST00000361308 USP21Q9UK80 565 aa22.51■■□□□ 1.19
LMNA-202ENST00000361308 RUNDC1Q96C34 613 aa22.51■■□□□ 1.19
LMNA-202ENST00000361308 CARD10Q9BWT7 1032 aa22.51■■□□□ 1.19
LMNA-202ENST00000361308 PLCH1Q4KWH8 1693 aa22.5■■□□□ 1.19
LMNA-202ENST00000361308 KDRP35968 1356 aa22.5■■□□□ 1.19
LMNA-202ENST00000361308 USP35Q9P2H5 1018 aa22.5■■□□□ 1.19
LMNA-202ENST00000361308 CRB1P82279 1406 aa22.5■■□□□ 1.19
LMNA-202ENST00000361308 RGPD1P0DJD0 1748 aa22.5■■□□□ 1.19
LMNA-202ENST00000361308 PLEKHF1Q96S99 279 aa22.49■■□□□ 1.19
LMNA-202ENST00000361308 BCL9LQ86UU0 1499 aa22.48■■□□□ 1.19
LMNA-202ENST00000361308 AFF2P51816 1311 aa22.48■■□□□ 1.19
LMNA-202ENST00000361308 NWD2Q9ULI1 1742 aa22.48■■□□□ 1.19
LMNA-202ENST00000361308 MAPK8IP3Q9UPT6 1336 aa22.48■■□□□ 1.19
LMNA-202ENST00000361308 FAM208AQ9UK61 1670 aaKnown RBP22.47■■□□□ 1.19
LMNA-202ENST00000361308 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
LMNA-202ENST00000361308 RGPD2P0DJD1 1756 aa22.47■■□□□ 1.19
LMNA-202ENST00000361308 ILDR1Q86SU0 546 aaPredicted RBP22.46■■□□□ 1.19
LMNA-202ENST00000361308 RAPGEF4Q8WZA2 1011 aa22.46■■□□□ 1.19
LMNA-202ENST00000361308 NCAPD2Q15021 1401 aa22.45■■□□□ 1.18
LMNA-202ENST00000361308 VPS72Q15906 364 aa22.45■■□□□ 1.18
LMNA-202ENST00000361308 PHACTR3Q96KR7 559 aa22.45■■□□□ 1.18
LMNA-202ENST00000361308 APAF1O14727 1248 aa22.44■■□□□ 1.18
LMNA-202ENST00000361308 YTHDC1Q96MU7 727 aaKnown RBP22.44■■□□□ 1.18
LMNA-202ENST00000361308 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
LMNA-202ENST00000361308 SPATA31A1Q5TZJ5 1347 aa22.43■■□□□ 1.18
LMNA-202ENST00000361308 NRAPQ86VF7 1730 aa22.43■■□□□ 1.18
LMNA-202ENST00000361308 SPATA31A5Q5VU36 1347 aa22.43■■□□□ 1.18
LMNA-202ENST00000361308 SPATA31A7Q8IWB4 1347 aa22.43■■□□□ 1.18
LMNA-202ENST00000361308 TATP17735 454 aaPredicted RBP22.43■■□□□ 1.18
LMNA-202ENST00000361308 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
LMNA-202ENST00000361308 IL2RBP14784 551 aa22.42■■□□□ 1.18
LMNA-202ENST00000361308 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
LMNA-202ENST00000361308 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
LMNA-202ENST00000361308 TRPC5Q9UL62 973 aaPredicted RBP22.41■■□□□ 1.18
LMNA-202ENST00000361308 PLEKHO1Q53GL0 409 aaPredicted RBP22.4■■□□□ 1.18
LMNA-202ENST00000361308 NEUROD2Q15784 382 aa22.39■■□□□ 1.17
LMNA-202ENST00000361308 AMOTQ4VCS5 1084 aa22.39■■□□□ 1.17
LMNA-202ENST00000361308 ZNF772Q68DY9 489 aaPredicted RBP22.39■■□□□ 1.17
LMNA-202ENST00000361308 QTRT2Q9H974 415 aaKnown RBP22.39■■□□□ 1.17
LMNA-202ENST00000361308 TMPOP42166 694 aaKnown RBP22.38■■□□□ 1.17
LMNA-202ENST00000361308 MTHFSDQ2M296 383 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms