RNA–Protein interactions for RNA: ENST00000360190.8

CDK5RAP2-202, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 5,985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-202ENST00000360190 TRDNQ13061 729 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 TNNT1P13805 278 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 TMCO3Q6UWJ1 677 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 FILIP1Q7Z7B0 1213 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 ERLIN1O75477 346 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CAMK4Q16566 473 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 TBC1D9Q6ZT07 1266 aa17.5■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CALRP27797 417 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CCDC30Q5VVM6 783 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CCDC94Q9BW85 323 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 ZKSCAN5Q9Y2L8 839 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 C1orf141Q5JVX7 400 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 MAP4K4O95819 1239 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 BMP2KLQ5H9B9 411 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 UBXN4Q92575 508 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 TMPOP42166 694 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 HS1BP3Q53T59 392 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 DDX58O95786 925 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CDR1P51861 262 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
CDK5RAP2-202ENST00000360190 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
CDK5RAP2-202ENST00000360190 STK3Q13188 491 aa17.48■□□□□ 0.39
CDK5RAP2-202ENST00000360190 SNX21Q969T3 373 aa17.48■□□□□ 0.39
CDK5RAP2-202ENST00000360190 PDE4CQ08493 712 aa17.48■□□□□ 0.39
CDK5RAP2-202ENST00000360190 STK38Q15208 465 aa17.48■□□□□ 0.39
CDK5RAP2-202ENST00000360190 GTPBP4Q9BZE4 634 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP2-202ENST00000360190 SAFBQ15424 915 aaKnown RBP eCLIP17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 ALDH1L2Q3SY69 923 aa17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 AXDND1Q5T1B0 1012 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CEP57L1Q8IYX8 460 aa17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 FAM177A1Q8N128 213 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 KIF18AQ8NI77 898 aa17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 SKIDA1Q1XH10 827 aa17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CCDC47Q96A33 483 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 SMARCE1Q969G3 411 aa17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 C16orf45Q96MC5 204 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 CBFA2T2O43439 604 aa17.47■□□□□ 0.39
CDK5RAP2-202ENST00000360190 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 NOLC1Q14978 699 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 SMAP1Q8IYB5 467 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 ME1P48163 572 aa17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 DEF6Q9H4E7 631 aa17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 PDIA4P13667 645 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP2-202ENST00000360190 TRIM27P14373 513 aa17.46■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CLIP2Q9UDT6 1046 aa17.46■□□□□ 0.38
CDK5RAP2-202ENST00000360190 JAKMIP1Q96N16 626 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
CDK5RAP2-202ENST00000360190 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
CDK5RAP2-202ENST00000360190 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CFAP45Q9UL16 551 aa17.45■□□□□ 0.38
CDK5RAP2-202ENST00000360190 UPF3BQ9BZI7 483 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP2-202ENST00000360190 PRG4Q92954 1404 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP2-202ENST00000360190 ABCC5O15440 1437 aa17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 RALYLQ86SE5 291 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 NAP1L1P55209 391 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 FILIP1LQ4L180 1135 aa17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 SEC24BO95487 1268 aa17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 EPRSP07814 1512 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 TROQ12816 1431 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 NOL10Q9BSC4 688 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP2-202ENST00000360190 ZNF830Q96NB3 372 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 PCDHB15Q9Y5E8 787 aa17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 HDAC1Q13547 482 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 ERC1Q8IUD2 1116 aa17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 TIGD1Q96MW7 591 aa17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 SMC5Q8IY18 1101 aa17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 KIAA0754O94854 1291 aa17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 MARCH6O60337 910 aa17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 NUCB1Q02818 461 aa17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 BBXQ8WY36 941 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 PAXBP1Q9Y5B6 917 aa17.42■□□□□ 0.38
CDK5RAP2-202ENST00000360190 USP8P40818 1118 aa17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CWC27Q6UX04 472 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CCDC83Q8IWF9 413 aa17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 SMTNL1A8MU46 457 aa17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 FCHSD2O94868 740 aa17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 CCDC102AQ96A19 550 aa17.41■□□□□ 0.38
CDK5RAP2-202ENST00000360190 NEMFO60524 1076 aa17.4■□□□□ 0.38
CDK5RAP2-202ENST00000360190 BLOC1S2Q6QNY1 142 aa17.4■□□□□ 0.38
CDK5RAP2-202ENST00000360190 POLR3GO15318 223 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP2-202ENST00000360190 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
CDK5RAP2-202ENST00000360190 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.381e-8■■■□□ 17.6
CDK5RAP2-202ENST00000360190 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
CDK5RAP2-202ENST00000360190 ABCC11Q96J66 1382 aa17.39■□□□□ 0.38
CDK5RAP2-202ENST00000360190 DHX16O60231 1041 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms