RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
NIF3L1-201ENST00000359683 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.28
NIF3L1-201ENST00000359683 MTHFSP49914 203 aa16.77■□□□□ 0.27
NIF3L1-201ENST00000359683 RBM6P78332 1123 aaKnown RBP16.77■□□□□ 0.27
NIF3L1-201ENST00000359683 QTRT2Q9H974 415 aaKnown RBP16.77■□□□□ 0.27
NIF3L1-201ENST00000359683 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
NIF3L1-201ENST00000359683 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
NIF3L1-201ENST00000359683 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
NIF3L1-201ENST00000359683 MIER1Q8N108 512 aa16.74■□□□□ 0.27
NIF3L1-201ENST00000359683 SMG6Q86US8 1419 aaKnown RBP16.74■□□□□ 0.27
NIF3L1-201ENST00000359683 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.74■□□□□ 0.27
NIF3L1-201ENST00000359683 IP6K1Q92551 441 aa16.74■□□□□ 0.27
NIF3L1-201ENST00000359683 USP21Q9UK80 565 aa16.74■□□□□ 0.27
NIF3L1-201ENST00000359683 FAM83GA6ND36 823 aa16.73■□□□□ 0.27
NIF3L1-201ENST00000359683 AMPHP49418 695 aa16.73■□□□□ 0.27
NIF3L1-201ENST00000359683 INSRP06213 1382 aa16.73■□□□□ 0.27
NIF3L1-201ENST00000359683 ATRNO75882 1429 aa16.72■□□□□ 0.27
NIF3L1-201ENST00000359683 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
NIF3L1-201ENST00000359683 HOXC9P31274 260 aa16.72■□□□□ 0.27
NIF3L1-201ENST00000359683 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
NIF3L1-201ENST00000359683 LTN1O94822 1766 aa16.72■□□□□ 0.27
NIF3L1-201ENST00000359683 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
NIF3L1-201ENST00000359683 FLT4P35916 1363 aa16.71■□□□□ 0.27
NIF3L1-201ENST00000359683 PEAK1Q9H792 1746 aa16.71■□□□□ 0.27
NIF3L1-201ENST00000359683 COL18A1P39060 1754 aa16.71■□□□□ 0.26
NIF3L1-201ENST00000359683 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
NIF3L1-201ENST00000359683 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
NIF3L1-201ENST00000359683 TRPC5Q9UL62 973 aaPredicted RBP16.7■□□□□ 0.26
NIF3L1-201ENST00000359683 AXIN2Q9Y2T1 843 aa16.7■□□□□ 0.26
NIF3L1-201ENST00000359683 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
NIF3L1-201ENST00000359683 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
NIF3L1-201ENST00000359683 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
NIF3L1-201ENST00000359683 KCNA4P22459 653 aa16.69■□□□□ 0.26
NIF3L1-201ENST00000359683 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
NIF3L1-201ENST00000359683 ABCC6O95255 1503 aa16.69■□□□□ 0.26
NIF3L1-201ENST00000359683 CFAP53Q96M91 514 aa16.68■□□□□ 0.26
NIF3L1-201ENST00000359683 BCL9LQ86UU0 1499 aa16.68■□□□□ 0.26
NIF3L1-201ENST00000359683 PLCH1Q4KWH8 1693 aa16.68■□□□□ 0.26
NIF3L1-201ENST00000359683 BLMP54132 1417 aaPredicted RBP16.67■□□□□ 0.26
NIF3L1-201ENST00000359683 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
NIF3L1-201ENST00000359683 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
NIF3L1-201ENST00000359683 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
NIF3L1-201ENST00000359683 CAMTA1Q9Y6Y1 1673 aa16.66■□□□□ 0.26
NIF3L1-201ENST00000359683 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
NIF3L1-201ENST00000359683 IL13P35225 146 aa16.65■□□□□ 0.26
NIF3L1-201ENST00000359683 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
NIF3L1-201ENST00000359683 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
NIF3L1-201ENST00000359683 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
NIF3L1-201ENST00000359683 GLI3P10071 1580 aa16.64■□□□□ 0.25
NIF3L1-201ENST00000359683 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
NIF3L1-201ENST00000359683 SLIT2O94813 1529 aa16.64■□□□□ 0.25
NIF3L1-201ENST00000359683 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
NIF3L1-201ENST00000359683 NWD2Q9ULI1 1742 aa16.63■□□□□ 0.25
NIF3L1-201ENST00000359683 LTV1Q96GA3 475 aaPredicted RBP16.63■□□□□ 0.25
NIF3L1-201ENST00000359683 ERBB3P21860 1342 aa16.63■□□□□ 0.25
NIF3L1-201ENST00000359683 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
NIF3L1-201ENST00000359683 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
NIF3L1-201ENST00000359683 EVA1CP58658 441 aa16.61■□□□□ 0.25
NIF3L1-201ENST00000359683 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
NIF3L1-201ENST00000359683 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
NIF3L1-201ENST00000359683 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
NIF3L1-201ENST00000359683 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
NIF3L1-201ENST00000359683 GJD4Q96KN9 370 aaPredicted RBP16.59■□□□□ 0.25
NIF3L1-201ENST00000359683 EYA1Q99502 592 aa16.59■□□□□ 0.25
NIF3L1-201ENST00000359683 NBPF6Q5VWK0 638 aa16.59■□□□□ 0.25
NIF3L1-201ENST00000359683 NBPF4Q96M43 638 aa16.59■□□□□ 0.25
NIF3L1-201ENST00000359683 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
NIF3L1-201ENST00000359683 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
NIF3L1-201ENST00000359683 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
NIF3L1-201ENST00000359683 LARP1Q6PKG0 1096 aaKnown RBP16.58■□□□□ 0.24
NIF3L1-201ENST00000359683 IGSF1Q8N6C5 1336 aa16.57■□□□□ 0.24
NIF3L1-201ENST00000359683 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 CARD10Q9BWT7 1032 aa16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 RGPD1P0DJD0 1748 aa16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 TOM1L2Q6ZVM7 507 aa16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
NIF3L1-201ENST00000359683 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
NIF3L1-201ENST00000359683 FAM208AQ9UK61 1670 aaKnown RBP16.55■□□□□ 0.24
NIF3L1-201ENST00000359683 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
NIF3L1-201ENST00000359683 VPS72Q15906 364 aa16.55■□□□□ 0.24
NIF3L1-201ENST00000359683 CRB1P82279 1406 aa16.55■□□□□ 0.24
NIF3L1-201ENST00000359683 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
NIF3L1-201ENST00000359683 EP400Q96L91 3159 aa16.54■□□□□ 0.24
NIF3L1-201ENST00000359683 FCHSD2O94868 740 aa16.53■□□□□ 0.24
NIF3L1-201ENST00000359683 SULT6B1Q6IMI4 303 aa16.53■□□□□ 0.24
NIF3L1-201ENST00000359683 KDRP35968 1356 aa16.53■□□□□ 0.24
NIF3L1-201ENST00000359683 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
NIF3L1-201ENST00000359683 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
NIF3L1-201ENST00000359683 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
NIF3L1-201ENST00000359683 USHBP1Q8N6Y0 703 aa16.52■□□□□ 0.24
NIF3L1-201ENST00000359683 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.24
NIF3L1-201ENST00000359683 HMOX1P09601 288 aa16.52■□□□□ 0.23
NIF3L1-201ENST00000359683 FAM9BQ8IZU0 186 aa16.52■□□□□ 0.23
NIF3L1-201ENST00000359683 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.23
NIF3L1-201ENST00000359683 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
NIF3L1-201ENST00000359683 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
NIF3L1-201ENST00000359683 PLEKHF1Q96S99 279 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms