RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 ABCC6O95255 1503 aa33.09■■■□□ 2.89
YIF1A-201ENST00000359461 SIN3AQ96ST3 1273 aa33.09■■■□□ 2.89
YIF1A-201ENST00000359461 TTC21BQ7Z4L5 1316 aa33.08■■■□□ 2.89
YIF1A-201ENST00000359461 WDR17Q8IZU2 1322 aa33.08■■■□□ 2.89
YIF1A-201ENST00000359461 ZBTB7CA1YPR0 619 aa33.07■■■□□ 2.88
YIF1A-201ENST00000359461 ZNF692Q9BU19 519 aaPredicted RBP33.07■■■□□ 2.88
YIF1A-201ENST00000359461 AXIN2Q9Y2T1 843 aa33.06■■■□□ 2.88
YIF1A-201ENST00000359461 TTC21AQ8NDW8 1320 aa33.05■■■□□ 2.88
YIF1A-201ENST00000359461 ARHGEF25Q86VW2 580 aa33.05■■■□□ 2.88
YIF1A-201ENST00000359461 BCL9O00512 1426 aa33.04■■■□□ 2.88
YIF1A-201ENST00000359461 TOM1L2Q6ZVM7 507 aa33.04■■■□□ 2.88
YIF1A-201ENST00000359461 SBNO2Q9Y2G9 1366 aa33.04■■■□□ 2.88
YIF1A-201ENST00000359461 DDB1Q16531 1140 aa33.03■■■□□ 2.88
YIF1A-201ENST00000359461 NBPF14Q5TI25 921 aa33.03■■■□□ 2.88
YIF1A-201ENST00000359461 KCNH5Q8NCM2 988 aa33.02■■■□□ 2.88
YIF1A-201ENST00000359461 CASZ1Q86V15 1759 aa33■■■□□ 2.87
YIF1A-201ENST00000359461 KTN1Q86UP2 1357 aaKnown RBP32.98■■■□□ 2.87
YIF1A-201ENST00000359461 PLSCR1O15162 318 aa32.98■■■□□ 2.87
YIF1A-201ENST00000359461 CDCA7Q9BWT1 371 aaPredicted RBP32.98■■■□□ 2.87
YIF1A-201ENST00000359461 LTN1O94822 1766 aa32.97■■■□□ 2.87
YIF1A-201ENST00000359461 NEUROD1Q13562 356 aa32.96■■■□□ 2.87
YIF1A-201ENST00000359461 CD163L1Q9NR16 1453 aa32.96■■■□□ 2.87
YIF1A-201ENST00000359461 CARD10Q9BWT7 1032 aa32.95■■■□□ 2.87
YIF1A-201ENST00000359461 MARCH10Q8NA82 808 aaPredicted RBP32.94■■■□□ 2.86
YIF1A-201ENST00000359461 BCL11BQ9C0K0 894 aaPredicted RBP32.94■■■□□ 2.86
YIF1A-201ENST00000359461 USP31Q70CQ4 1352 aa32.93■■■□□ 2.86
YIF1A-201ENST00000359461 PTF1AQ7RTS3 328 aa32.91■■■□□ 2.86
YIF1A-201ENST00000359461 CCDC7Q96M83 1385 aa32.91■■■□□ 2.86
YIF1A-201ENST00000359461 TNS2Q63HR2 1409 aa32.91■■■□□ 2.86
YIF1A-201ENST00000359461 NHSQ6T4R5 1651 aa32.9■■■□□ 2.86
YIF1A-201ENST00000359461 SOX12O15370 315 aa32.89■■■□□ 2.86
YIF1A-201ENST00000359461 SPON1Q9HCB6 807 aa32.88■■■□□ 2.85
YIF1A-201ENST00000359461 ANO8Q9HCE9 1232 aaPredicted RBP32.87■■■□□ 2.85
YIF1A-201ENST00000359461 KCNQ2O43526 872 aa32.86■■■□□ 2.85
YIF1A-201ENST00000359461 CSB-PGBD3P0DP91 1061 aa32.86■■■□□ 2.85
YIF1A-201ENST00000359461 PROM2Q8N271 834 aa32.84■■■□□ 2.85
YIF1A-201ENST00000359461 NINLQ9Y2I6 1382 aa32.83■■■□□ 2.85
YIF1A-201ENST00000359461 ERBB3P21860 1342 aa32.81■■■□□ 2.84
YIF1A-201ENST00000359461 EDC4Q6P2E9 1401 aaKnown RBP32.81■■■□□ 2.84
YIF1A-201ENST00000359461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.8■■■□□ 2.84
YIF1A-201ENST00000359461 CARD11Q9BXL7 1154 aa32.8■■■□□ 2.84
YIF1A-201ENST00000359461 EXOC5O00471 708 aa32.79■■■□□ 2.84
YIF1A-201ENST00000359461 NME9Q86XW9 330 aa32.79■■■□□ 2.84
YIF1A-201ENST00000359461 FAM208AQ9UK61 1670 aaKnown RBP32.78■■■□□ 2.84
YIF1A-201ENST00000359461 MYOM1P52179 1685 aa32.77■■■□□ 2.84
YIF1A-201ENST00000359461 PAPPAQ13219 1627 aa32.77■■■□□ 2.84
YIF1A-201ENST00000359461 PPP1R1BQ9UD71 204 aaPredicted RBP32.76■■■□□ 2.83
YIF1A-201ENST00000359461 BTAF1O14981 1849 aa32.76■■■□□ 2.83
YIF1A-201ENST00000359461 A0A1W2PP64 1363 aa32.75■■■□□ 2.83
YIF1A-201ENST00000359461 TXNRD1Q16881 649 aa32.74■■■□□ 2.83
YIF1A-201ENST00000359461 HDGFL2Q7Z4V5 671 aaPredicted RBP32.73■■■□□ 2.83
YIF1A-201ENST00000359461 PUS7Q96PZ0 661 aaKnown RBP32.72■■■□□ 2.83
YIF1A-201ENST00000359461 PDGFDQ9GZP0 370 aaPredicted RBP32.72■■■□□ 2.83
YIF1A-201ENST00000359461 SLC12A5Q9H2X9 1139 aa32.72■■■□□ 2.83
YIF1A-201ENST00000359461 TMC1Q8TDI8 760 aa32.7■■■□□ 2.83
YIF1A-201ENST00000359461 NLRP2Q9NX02 1062 aa32.69■■■□□ 2.82
YIF1A-201ENST00000359461 TONSLQ96HA7 1378 aa32.69■■■□□ 2.82
YIF1A-201ENST00000359461 IL2RBP14784 551 aa32.68■■■□□ 2.82
YIF1A-201ENST00000359461 TERF2IPQ9NYB0 399 aa32.68■■■□□ 2.82
YIF1A-201ENST00000359461 ANKRD24Q8TF21 1146 aa32.67■■■□□ 2.82
YIF1A-201ENST00000359461 SLC15A2Q16348 729 aa32.66■■■□□ 2.82
YIF1A-201ENST00000359461 STK32BQ9NY57 414 aa32.66■■■□□ 2.82
YIF1A-201ENST00000359461 PTGER2P43116 358 aa32.65■■■□□ 2.82
YIF1A-201ENST00000359461 KAT6BQ8WYB5 2073 aa32.63■■■□□ 2.81
YIF1A-201ENST00000359461 ZBTB7AO95365 584 aa32.63■■■□□ 2.81
YIF1A-201ENST00000359461 YY1P25490 414 aa32.63■■■□□ 2.81
YIF1A-201ENST00000359461 QSER1Q2KHR3 1735 aa32.62■■■□□ 2.81
YIF1A-201ENST00000359461 SHANK3Q9BYB0 1731 aa32.61■■■□□ 2.81
YIF1A-201ENST00000359461 ACSBG1Q96GR2 724 aa32.61■■■□□ 2.81
YIF1A-201ENST00000359461 TESK2Q96S53 571 aa32.61■■■□□ 2.81
YIF1A-201ENST00000359461 RGPD2P0DJD1 1756 aa32.6■■■□□ 2.81
YIF1A-201ENST00000359461 IP6K1Q92551 441 aa32.58■■■□□ 2.81
YIF1A-201ENST00000359461 SGIP1Q9BQI5 828 aa32.56■■■□□ 2.8
YIF1A-201ENST00000359461 DOT1LQ8TEK3 1739 aa32.56■■■□□ 2.8
YIF1A-201ENST00000359461 DCAF8L1A6NGE4 600 aa32.55■■■□□ 2.8
YIF1A-201ENST00000359461 MTFR1LQ9H019 292 aa32.55■■■□□ 2.8
YIF1A-201ENST00000359461 ATF5Q9Y2D1 282 aaPredicted RBP32.54■■■□□ 2.8
YIF1A-201ENST00000359461 COL24A1Q17RW2 1714 aa32.54■■■□□ 2.8
YIF1A-201ENST00000359461 LY75O60449 1722 aa32.52■■■□□ 2.8
YIF1A-201ENST00000359461 TUBGCP6Q96RT7 1819 aa32.52■■■□□ 2.8
YIF1A-201ENST00000359461 ST20-MTHFSA0A0A6YYL1 179 aa32.52■■■□□ 2.8
YIF1A-201ENST00000359461 ANKRD36BQ8N2N9 1353 aa32.5■■■□□ 2.79
YIF1A-201ENST00000359461 MAP3K19Q56UN5 1328 aa32.5■■■□□ 2.79
YIF1A-201ENST00000359461 SLC24A1O60721 1099 aa32.48■■■□□ 2.79
YIF1A-201ENST00000359461 ZNF827Q17R98 1081 aa32.48■■■□□ 2.79
YIF1A-201ENST00000359461 COG3Q96JB2 828 aa32.48■■■□□ 2.79
YIF1A-201ENST00000359461 LRRC4BQ9NT99 713 aa32.48■■■□□ 2.79
YIF1A-201ENST00000359461 HOXC9P31274 260 aa32.47■■■□□ 2.79
YIF1A-201ENST00000359461 FHDC1Q9C0D6 1143 aaPredicted RBP32.47■■■□□ 2.79
YIF1A-201ENST00000359461 CHD4Q14839 1912 aa32.47■■■□□ 2.79
YIF1A-201ENST00000359461 KIF20BQ96Q89 1820 aa32.47■■■□□ 2.79
YIF1A-201ENST00000359461 RTL1A6NKG5 1358 aa32.46■■■□□ 2.79
YIF1A-201ENST00000359461 MEGF6O75095 1541 aa32.46■■■□□ 2.79
YIF1A-201ENST00000359461 LTV1Q96GA3 475 aaPredicted RBP32.45■■■□□ 2.79
YIF1A-201ENST00000359461 SYT17Q9BSW7 474 aa32.45■■■□□ 2.79
YIF1A-201ENST00000359461 MAP3K5Q99683 1374 aa32.45■■■□□ 2.78
YIF1A-201ENST00000359461 NSD2O96028 1365 aa32.43■■■□□ 2.78
YIF1A-201ENST00000359461 DDX54Q8TDD1 881 aaKnown RBP32.42■■■□□ 2.78
YIF1A-201ENST00000359461 SLC27A3Q5K4L6 730 aa32.41■■■□□ 2.78
YIF1A-201ENST00000359461 AKT1S1Q96B36 256 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms