RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 IP6K1Q92551 441 aa20.09■□□□□ 0.81
CCNE1-202ENST00000357943 FLT4P35916 1363 aa20.09■□□□□ 0.81
CCNE1-202ENST00000357943 NGLY1Q96IV0 654 aa20.08■□□□□ 0.8
CCNE1-202ENST00000357943 BTG4Q9NY30 223 aa20.08■□□□□ 0.8
CCNE1-202ENST00000357943 RTL1A6NKG5 1358 aa20.07■□□□□ 0.8
CCNE1-202ENST00000357943 KIF24Q5T7B8 1368 aa20.07■□□□□ 0.8
CCNE1-202ENST00000357943 COL18A1P39060 1754 aa20.07■□□□□ 0.8
CCNE1-202ENST00000357943 CAMTA1Q9Y6Y1 1673 aa20.07■□□□□ 0.8
CCNE1-202ENST00000357943 LMO7Q8WWI1 1683 aa20.06■□□□□ 0.8
CCNE1-202ENST00000357943 COL14A1Q05707 1796 aaKnown RBP20.06■□□□□ 0.8
CCNE1-202ENST00000357943 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
CCNE1-202ENST00000357943 SLIT2O94813 1529 aa20.05■□□□□ 0.8
CCNE1-202ENST00000357943 FNBP4Q8N3X1 1017 aaPredicted RBP20.05■□□□□ 0.8
CCNE1-202ENST00000357943 INSRP06213 1382 aa20.04■□□□□ 0.8
CCNE1-202ENST00000357943 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
CCNE1-202ENST00000357943 ABCC6O95255 1503 aa20.04■□□□□ 0.8
CCNE1-202ENST00000357943 LTV1Q96GA3 475 aaPredicted RBP20.03■□□□□ 0.8
CCNE1-202ENST00000357943 ANKRD24Q8TF21 1146 aa20.02■□□□□ 0.8
CCNE1-202ENST00000357943 STRN4Q9NRL3 753 aa20.02■□□□□ 0.8
CCNE1-202ENST00000357943 ERBB3P21860 1342 aa20.02■□□□□ 0.8
CCNE1-202ENST00000357943 AFF2P51816 1311 aa20.02■□□□□ 0.8
CCNE1-202ENST00000357943 COL5A2P05997 1499 aaPredicted RBP20.02■□□□□ 0.8
CCNE1-202ENST00000357943 PLCH1Q4KWH8 1693 aa20.02■□□□□ 0.8
CCNE1-202ENST00000357943 MIER1Q8N108 512 aa20.02■□□□□ 0.79
CCNE1-202ENST00000357943 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
CCNE1-202ENST00000357943 RGPD5Q99666 1765 aa20.01■□□□□ 0.79
CCNE1-202ENST00000357943 EIF4A2Q14240 407 aaKnown RBP20.01■□□□□ 0.79
CCNE1-202ENST00000357943 CCDC184Q52MB2 194 aa20.01■□□□□ 0.79
CCNE1-202ENST00000357943 EVA1CP58658 441 aa20■□□□□ 0.79
CCNE1-202ENST00000357943 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
CCNE1-202ENST00000357943 USP21Q9UK80 565 aa20■□□□□ 0.79
CCNE1-202ENST00000357943 COL3A1P02461 1466 aaPredicted RBP19.99■□□□□ 0.79
CCNE1-202ENST00000357943 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
CCNE1-202ENST00000357943 CFAP53Q96M91 514 aa19.99■□□□□ 0.79
CCNE1-202ENST00000357943 CSB-PGBD3P0DP91 1061 aa19.98■□□□□ 0.79
CCNE1-202ENST00000357943 NWD2Q9ULI1 1742 aa19.98■□□□□ 0.79
CCNE1-202ENST00000357943 WDR17Q8IZU2 1322 aa19.98■□□□□ 0.79
CCNE1-202ENST00000357943 DIAPH1O60610 1272 aaKnown RBP19.98■□□□□ 0.79
CCNE1-202ENST00000357943 IL13P35225 146 aa19.98■□□□□ 0.79
CCNE1-202ENST00000357943 NRAPQ86VF7 1730 aa19.97■□□□□ 0.79
CCNE1-202ENST00000357943 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
CCNE1-202ENST00000357943 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
CCNE1-202ENST00000357943 NBPF4Q96M43 638 aa19.94■□□□□ 0.78
CCNE1-202ENST00000357943 EYA1Q99502 592 aa19.94■□□□□ 0.78
CCNE1-202ENST00000357943 MRS2Q9HD23 443 aa19.94■□□□□ 0.78
CCNE1-202ENST00000357943 NLRP2Q9NX02 1062 aa19.94■□□□□ 0.78
CCNE1-202ENST00000357943 CRB1P82279 1406 aa19.93■□□□□ 0.78
CCNE1-202ENST00000357943 VPS72Q15906 364 aa19.93■□□□□ 0.78
CCNE1-202ENST00000357943 USP35Q9P2H5 1018 aa19.93■□□□□ 0.78
CCNE1-202ENST00000357943 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
CCNE1-202ENST00000357943 U2SURPO15042 1029 aaKnown RBP19.92■□□□□ 0.78
CCNE1-202ENST00000357943 USHBP1Q8N6Y0 703 aa19.92■□□□□ 0.78
CCNE1-202ENST00000357943 CCDC9Q9Y3X0 531 aaKnown RBP19.92■□□□□ 0.78
CCNE1-202ENST00000357943 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
CCNE1-202ENST00000357943 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
CCNE1-202ENST00000357943 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
CCNE1-202ENST00000357943 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.91■□□□□ 0.78
CCNE1-202ENST00000357943 CARD10Q9BWT7 1032 aa19.91■□□□□ 0.78
CCNE1-202ENST00000357943 QTRT2Q9H974 415 aaKnown RBP19.91■□□□□ 0.78
CCNE1-202ENST00000357943 TRPC5Q9UL62 973 aaPredicted RBP19.91■□□□□ 0.78
CCNE1-202ENST00000357943 NUDCQ9Y266 331 aa19.91■□□□□ 0.78
CCNE1-202ENST00000357943 ATRNO75882 1429 aa19.9■□□□□ 0.78
CCNE1-202ENST00000357943 SPATA31A5Q5VU36 1347 aa19.9■□□□□ 0.78
CCNE1-202ENST00000357943 SPATA31A7Q8IWB4 1347 aa19.9■□□□□ 0.78
CCNE1-202ENST00000357943 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
CCNE1-202ENST00000357943 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
CCNE1-202ENST00000357943 SPATA31A1Q5TZJ5 1347 aa19.89■□□□□ 0.78
CCNE1-202ENST00000357943 SULT6B1Q6IMI4 303 aa19.88■□□□□ 0.77
CCNE1-202ENST00000357943 AEBP1Q8IUX7 1158 aa19.88■□□□□ 0.77
CCNE1-202ENST00000357943 FAM208AQ9UK61 1670 aaKnown RBP19.88■□□□□ 0.77
CCNE1-202ENST00000357943 HMOX1P09601 288 aa19.87■□□□□ 0.77
CCNE1-202ENST00000357943 RGPD1P0DJD0 1748 aa19.87■□□□□ 0.77
CCNE1-202ENST00000357943 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
CCNE1-202ENST00000357943 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCNE1-202ENST00000357943 GJD4Q96KN9 370 aaPredicted RBP19.87■□□□□ 0.77
CCNE1-202ENST00000357943 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
CCNE1-202ENST00000357943 NCAPD2Q15021 1401 aa19.86■□□□□ 0.77
CCNE1-202ENST00000357943 TCP11L2Q8N4U5 519 aa19.86■□□□□ 0.77
CCNE1-202ENST00000357943 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
CCNE1-202ENST00000357943 KDRP35968 1356 aa19.85■□□□□ 0.77
CCNE1-202ENST00000357943 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCNE1-202ENST00000357943 THRAP3Q9Y2W1 955 aaKnown RBP19.84■□□□□ 0.77
CCNE1-202ENST00000357943 GLI3P10071 1580 aa19.84■□□□□ 0.77
CCNE1-202ENST00000357943 FAM98CQ17RN3 349 aaKnown RBP19.84■□□□□ 0.77
CCNE1-202ENST00000357943 ADAMTS8Q9UP79 889 aa19.84■□□□□ 0.77
CCNE1-202ENST00000357943 RSPH6AQ9H0K4 717 aa19.82■□□□□ 0.76
CCNE1-202ENST00000357943 IL2RBP14784 551 aa19.81■□□□□ 0.76
CCNE1-202ENST00000357943 BARGINQ6ZT62 677 aa19.81■□□□□ 0.76
CCNE1-202ENST00000357943 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
CCNE1-202ENST00000357943 MEGF6O75095 1541 aa19.81■□□□□ 0.76
CCNE1-202ENST00000357943 DISP2A7MBM2 1401 aa19.8■□□□□ 0.76
CCNE1-202ENST00000357943 FCHSD2O94868 740 aa19.8■□□□□ 0.76
CCNE1-202ENST00000357943 RBM6P78332 1123 aaKnown RBP19.8■□□□□ 0.76
CCNE1-202ENST00000357943 RAPGEF4Q8WZA2 1011 aa19.8■□□□□ 0.76
CCNE1-202ENST00000357943 PRKAR2BP31323 418 aa19.8■□□□□ 0.76
CCNE1-202ENST00000357943 TATP17735 454 aaPredicted RBP19.78■□□□□ 0.76
CCNE1-202ENST00000357943 RXRBP28702 533 aa19.78■□□□□ 0.76
CCNE1-202ENST00000357943 ONECUT3O60422 494 aaPredicted RBP19.77■□□□□ 0.76
CCNE1-202ENST00000357943 PLEKHF1Q96S99 279 aa19.77■□□□□ 0.76
CCNE1-202ENST00000357943 CCDC146Q8IYE0 955 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms