RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 AATKQ6ZMQ8 1374 aa12.43□□□□□ -0.42
COL4A3BP-202ENST00000357457 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
COL4A3BP-202ENST00000357457 NLRP6P59044 892 aa12.43□□□□□ -0.42
COL4A3BP-202ENST00000357457 COL18A1P39060 1754 aa12.43□□□□□ -0.42
COL4A3BP-202ENST00000357457 USP6P35125 1406 aa12.42□□□□□ -0.42
COL4A3BP-202ENST00000357457 KCNQ2O43526 872 aa12.41□□□□□ -0.42
COL4A3BP-202ENST00000357457 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
COL4A3BP-202ENST00000357457 SPON1Q9HCB6 807 aa12.41□□□□□ -0.42
COL4A3BP-202ENST00000357457 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
COL4A3BP-202ENST00000357457 SLIT3O75094 1523 aa12.41□□□□□ -0.42
COL4A3BP-202ENST00000357457 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
COL4A3BP-202ENST00000357457 RGPD4Q7Z3J3 1758 aa12.41□□□□□ -0.42
COL4A3BP-202ENST00000357457 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
COL4A3BP-202ENST00000357457 OVOS2A0A0J9YW53 1432 aa12.4□□□□□ -0.42
COL4A3BP-202ENST00000357457 BCL9O00512 1426 aa12.4□□□□□ -0.42
COL4A3BP-202ENST00000357457 OVOS2Q6IE36 1432 aa12.4□□□□□ -0.42
COL4A3BP-202ENST00000357457 DDB1Q16531 1140 aa12.4□□□□□ -0.42
COL4A3BP-202ENST00000357457 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
COL4A3BP-202ENST00000357457 ARHGEF25Q86VW2 580 aa12.39□□□□□ -0.43
COL4A3BP-202ENST00000357457 PROM2Q8N271 834 aa12.39□□□□□ -0.43
COL4A3BP-202ENST00000357457 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
COL4A3BP-202ENST00000357457 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
COL4A3BP-202ENST00000357457 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
COL4A3BP-202ENST00000357457 WDR17Q8IZU2 1322 aa12.38□□□□□ -0.43
COL4A3BP-202ENST00000357457 TOM1L2Q6ZVM7 507 aa12.38□□□□□ -0.43
COL4A3BP-202ENST00000357457 MARCH10Q8NA82 808 aaPredicted RBP12.38□□□□□ -0.43
COL4A3BP-202ENST00000357457 PIK3C2AO00443 1686 aa12.38□□□□□ -0.43
COL4A3BP-202ENST00000357457 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 YY1P25490 414 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 PTF1AQ7RTS3 328 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 KCNH5Q8NCM2 988 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 NINLQ9Y2I6 1382 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
COL4A3BP-202ENST00000357457 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
COL4A3BP-202ENST00000357457 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
COL4A3BP-202ENST00000357457 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
COL4A3BP-202ENST00000357457 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
COL4A3BP-202ENST00000357457 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
COL4A3BP-202ENST00000357457 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
COL4A3BP-202ENST00000357457 AKAP12Q02952 1782 aa12.34□□□□□ -0.43
COL4A3BP-202ENST00000357457 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
COL4A3BP-202ENST00000357457 EXOC5O00471 708 aa12.33□□□□□ -0.44
COL4A3BP-202ENST00000357457 PDGFDQ9GZP0 370 aaPredicted RBP12.33□□□□□ -0.44
COL4A3BP-202ENST00000357457 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
COL4A3BP-202ENST00000357457 PTGER2P43116 358 aa12.32□□□□□ -0.44
COL4A3BP-202ENST00000357457 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
COL4A3BP-202ENST00000357457 TXNRD1Q16881 649 aa12.31□□□□□ -0.44
COL4A3BP-202ENST00000357457 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
COL4A3BP-202ENST00000357457 NFAT5O94916 1531 aa12.31□□□□□ -0.44
COL4A3BP-202ENST00000357457 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
COL4A3BP-202ENST00000357457 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
COL4A3BP-202ENST00000357457 SLC15A2Q16348 729 aa12.3□□□□□ -0.44
COL4A3BP-202ENST00000357457 SIN3AQ96ST3 1273 aa12.3□□□□□ -0.44
COL4A3BP-202ENST00000357457 ABCC6O95255 1503 aa12.3□□□□□ -0.44
COL4A3BP-202ENST00000357457 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
COL4A3BP-202ENST00000357457 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
COL4A3BP-202ENST00000357457 ROCK2O75116 1388 aaKnown RBP12.29□□□□□ -0.44
COL4A3BP-202ENST00000357457 KTN1Q86UP2 1357 aaKnown RBP12.29□□□□□ -0.44
COL4A3BP-202ENST00000357457 SOX12O15370 315 aa12.28□□□□□ -0.44
COL4A3BP-202ENST00000357457 SGIP1Q9BQI5 828 aa12.28□□□□□ -0.44
COL4A3BP-202ENST00000357457 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
COL4A3BP-202ENST00000357457 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
COL4A3BP-202ENST00000357457 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
COL4A3BP-202ENST00000357457 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
COL4A3BP-202ENST00000357457 MTFR1LQ9H019 292 aa12.27□□□□□ -0.45
COL4A3BP-202ENST00000357457 MON2Q7Z3U7 1717 aa12.27□□□□□ -0.45
COL4A3BP-202ENST00000357457 ERBB3P21860 1342 aa12.27□□□□□ -0.45
COL4A3BP-202ENST00000357457 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
COL4A3BP-202ENST00000357457 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
COL4A3BP-202ENST00000357457 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
COL4A3BP-202ENST00000357457 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
COL4A3BP-202ENST00000357457 MYOM1P52179 1685 aa12.25□□□□□ -0.45
COL4A3BP-202ENST00000357457 NHSQ6T4R5 1651 aa12.25□□□□□ -0.45
COL4A3BP-202ENST00000357457 CHD4Q14839 1912 aa12.25□□□□□ -0.45
COL4A3BP-202ENST00000357457 IL2RBP14784 551 aa12.24□□□□□ -0.45
COL4A3BP-202ENST00000357457 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
COL4A3BP-202ENST00000357457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL4A3BP-202ENST00000357457 FHDC1Q9C0D6 1143 aaPredicted RBP12.24□□□□□ -0.45
COL4A3BP-202ENST00000357457 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
COL4A3BP-202ENST00000357457 LTN1O94822 1766 aa12.23□□□□□ -0.45
COL4A3BP-202ENST00000357457 NME9Q86XW9 330 aa12.23□□□□□ -0.45
COL4A3BP-202ENST00000357457 ACSBG1Q96GR2 724 aa12.23□□□□□ -0.45
COL4A3BP-202ENST00000357457 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
COL4A3BP-202ENST00000357457 BTAF1O14981 1849 aa12.23□□□□□ -0.45
COL4A3BP-202ENST00000357457 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
COL4A3BP-202ENST00000357457 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
COL4A3BP-202ENST00000357457 SLC12A5Q9H2X9 1139 aa12.22□□□□□ -0.45
COL4A3BP-202ENST00000357457 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
COL4A3BP-202ENST00000357457 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
COL4A3BP-202ENST00000357457 IP6K1Q92551 441 aa12.21□□□□□ -0.45
COL4A3BP-202ENST00000357457 ARXQ96QS3 562 aa12.21□□□□□ -0.45
COL4A3BP-202ENST00000357457 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
COL4A3BP-202ENST00000357457 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
COL4A3BP-202ENST00000357457 HDGFL2Q7Z4V5 671 aaPredicted RBP12.2□□□□□ -0.46
COL4A3BP-202ENST00000357457 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
COL4A3BP-202ENST00000357457 CARD11Q9BXL7 1154 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms